Development of two novel CYP-antibodies and their use in a PCB exposure experiment with Mytilus edulis

In an attempt to learn more about the cytochrome P450 (CYP) system of mussels, we used protein databases and alignment software to extract highly conserved CYP sequences. From these alignments synthetic peptides were produced and used for rabbit immunisation, which yielded polyclonal antibodies against the CYP families 2 and 4. The antibodies were evaluated with Western Blot and ELISA assays, using digestive gland microsomal samples from the mussel Mytilus edulis. Western Blots revealed immunoreactions for both antibodies. The anti-CYP2 sequence rendered one major immunopositive protein of ≈49 kDa size, and weak signals for proteins of ≈41 and 56 kDa size. The anti-CYP4 sequence rendered two major bands of ≈56 and 59 kDa size, and also a weak immunoreaction with a protein of ≈43 kDa size. ELISA rendered only weak signals even with a 1:50 dilution of IgG-purified serum. A 10-day exposure to Aroclor 1254 did not appear to affect any of the immunopositive proteins, while total PCBs in soft bodies increased from 14–40 ng/g DW in controls to 373–638 ng/g DW in exposed mussels.     

Development of two novel CYP-antibodies and their use in a PCB exposure experiment with Mytilus edulis

In an attempt to learn more about the cytochrome P450 (CYP) system of mussels, we used protein databases and alignment software to extract highly conserved CYP sequences. From these alignments synthetic peptides were produced and used for rabbit immunisation, which yielded polyclonal antibodies against the CYP families 2 and 4. The antibodies were evaluated with Western Blot and ELISA assays, using digestive gland microsomal samples from the mussel Mytilus edulis. Western Blots revealed immunoreactions for both antibodies. The anti-CYP2 sequence rendered one major immunopositive protein of approximately 49 kDa size, and weak signals for proteins of approximately 41 and 56 kDa size. The anti-CYP4 sequence rendered two major bands of approximately 56 and 59 kDa size, and also a weak immunoreaction with a protein of approximately 43 kDa size. ELISA rendered only weak signals even with a 1:50 dilution of IgG-purified serum. A 10-day exposure to Aroclor 1254 did not appear to affect any of the immunopositive proteins, while total PCBs in soft bodies increased from 14-40 ng/g DW in controls to 373-638 ng/g DW in exposed mussels.     

A note on wave action conservation in a dissipative current wave motion

We consider steady, slowly varying water waves propagating on a steady current over a gently sloping bed, so-called current depth refraction. All expressions are correct to second order in wave amplitude. Formulating the energy equation for the fluctuating motion in terms of wave action (wave energy divided by intrinsic angular frequency) results in an expression, where the dissipative term is strikingly similar to wave action itself. It is simply the ‘extra’ dissipation (per unit area) caused by the fluctuating motion (i.e. total dissipation minus the effect of current acting on total mean bed shear stress) divided by the intrinsic angular frequency. We call it ‘wave action dissipation’. An inconsistency in Phillips' (1977) book is pointed out. A new formula for the calculation of wave amplitudes along rays is set forth.     

Path following control system for a tanker ship model

A two-dimensional path following control system for autonomous marine surface vessels is presented. The guidance system is obtained through a way-point guidance scheme based on line-of-sight projection algorithm and the speed controller is achieved through state feedback linearization. A new approach concerning the calculation of a dynamic line-of-sight vector norm is presented which main idea is to improve the speed of the convergence of the vehicle to the desired path. The results obtained are compared with the traditional line-of-sight scheme. It is intended that the complete system will be tested and implemented in a model of the “Esso Osaka” tanker. The results of simulations are presented here showing the effectiveness of the system aiming in to be robust enough to perform tests either in tanks or lakes.     

Alkaline fluid circulation in ultramafic rocks and formation of nucleotide constituents: a hypothesis

Seawater is constantly circulating through oceanic basement as a low-temperature hydrothermal fluid (<150°C). In cases when ultramafic rocks are exposed to the fluids, for instance during the initial phase of subduction, ferromagnesian minerals are altered in contact with the water, leading to high pH and formation of secondary magnesium hydroxide, among other – brucite, that may scavenge borate and phosphate from seawater. The high pH may promote abiotic formation of pentoses, particularly ribose. Pentoses are stabilized by borate, since cyclic pentoses form a less reactive complex with borate. Analyses have shown that borate occupies the 2' and 3' positions of ribose, thus leaving the 5' position available for reactions like phosphorylation. The purine coding elements (adenine, in particular) of RNA may be formed in the same general hydrothermal environments of the seafloor.     

The fall and rise of metropolitan government in Copenhagen

In this paper it is argued that the re-establishment of a metropolitan government in the Greater Copenhagen Area in 2000 (Greater Copenhagen Authority) is not to be seen as a return to the kind of regional, coordinative authority (Greater Copenhagen Council) that was abolished in the Thatcherite climate of the 1980s. Throughout the 1980s and 1990s new forms of urban governance, entrepreneurialism and a higher national priority to the capital region were introduced, which changed the conditions under which the new metropolitan government is operating. This `contextualization' of the analysis of the two generations of metropolitan government points to the fact that typologies of metropolitan government, such as the one put forward by Sharpe (1995), often lacks analytical cogency. This revised version was published online in August 2006 with corrections to the Cover Date.     

The significance of rock structure,lithology and pre‐glacial deep weathering for the shape of intermediate‐scale glacial erosional landforms

The main landforms within the glacially scoured Precambrian rocks of the Swedish west coast are closely connected to the principal structural pattern and have lately been explained as mainly a result of etch processes, probably during the Mesozoic and with a possible second period of etching during the Neogene. To explore the effect of multiple glacial erosion on the rock surfaces, an island with two different lithologies and with striae from different directions was selected for a detailed study, focusing on the shape of roches moutonnées. Air‐photo interpretation of bedrock lineaments and roches moutonnées combined with detailed field mapping and striae measurements are used to interpret the structural and lithological control on the resulting shape. The study reveals a significant difference in shape between roches moutonnées in augen‐granite and orthogneiss. Low elongated and streamlined roches moutonnées occur in the gneiss area, striated by a Late Weichselian ice flow from the NE. This ice flow is subparallel with both the local dominant trend of topographically well‐expressed joints and the schistosity of the gneiss. Frequently, there are no signs of quarrying on the lee‐sides of the gneiss roches moutonnées and hence they resemble the shape of whalebacks, or ruwares, as typically associated with the exposed basal weathering surface found in tropical areas. The granite roches moutonnées were formed by an older ice flow from the ESE, which closely followed the etched WNW–ESE joint system of the granite. Late Weichselian ice flow from the NE caused only minor changes of the landforms. On the contrary, marks of the early ESE ice flow are poorly preserved in the gneiss area, where it probably never had any large effect as the flow was perpendicular to both schistosity and structures and, accordingly, also to the pre‐glacial relief. The study demonstrates that coincidence between ice flow direction and pre‐glacially etched structures is most likely to determine the effects of glacial erosion. Copyright © 2002 John Wiley & Sons, Ltd.     

Tentative study of flow patterns in the North Aegean Sea using NOAA-AVHRR images and 2D model simulation

A statistical technique for image processing, the maximum cross correlation (MCC) method, was utilized on sequences of NOAA-AVHRR thermal data in order to explore the surface advective current dynamics at the discharge region of the Hellespont in the North Aegean Sea. A 2D numerical flow model was also used in order to simulate the barotropic flow pattern of the surface water layer. The model was forced with diurnal wind fields obtained for the same period as the satellite infrared images. The currents (magnitude and direction) derived from the two methods compare satisfactorily despite the fact that some model simplifications were made.     

The Late Cretaceous Klepa basalts in Macedonia (FYROM)—Constraints on the final stage of Tethys closure in the Balkans

The waning stage(s) of the Tethyan ocean(s) in the Balkans are not well understood. Controversy centres on the origin and life‐span of the Cretaceous Sava Zone, which is allegedly a remnant of the last oceanic domain in the Balkan Peninsula, defining the youngest suture between Eurasia‐ and Adria‐derived plates. In order to investigate to what extent Late‐Cretaceous volcanism within the Sava Zone is consistent with this model we present new age data together with trace‐element and Sr–Nd–Pb isotope data for the Klepa basaltic lavas from the central Balkan Peninsula. Our new geochemical data show marked differences between the Cretaceous Klepa basalts (Sava Zone) and the rocks of other volcanic sequences from the Jurassic ophiolites of the Balkans. The Klepa basalts mostly have Sr–Nd–Pb isotopic and trace‐element signatures that resemble enriched within‐plate basalts substantially different from Jurassic ophiolite basalts with MORB, BAB and IAV affinities. Trace‐element modelling of the Klepa rocks indicates 2%–20% polybaric melting of a relatively homogeneously metasomatised mantle source that ranges in composition from garnet lherzolite to ilmenite+apatite bearing spinel–amphibole lherzolite. Thus, the residual mineralogy is characteristic of a continental rather than oceanic lithospheric mantle source, suggesting an intracontinental within‐plate origin for the Klepa basalts. Two alternative geodynamic models are internally consistent with our new findings: (1) if the Sava Zone represents remnants of the youngest Neotethyan Ocean, magmatism along this zone would be situated within the forearc region and triggered by ridge subduction; (2) if the Sava Zone delimits a diffuse tectonic boundary between Adria and Europe which had already collided in the Late Jurassic, the Klepa basalts together with a number of other magmatic centres represent volcanism related to transtensional tectonics.