Undular tidal bore dynamics in the Daly Estuary, Northern Australia

Measurements in the macro-tidal Daly Estuary show that the presence of an undular tidal bore contributed negligibly to the dissipation of tidal energy. No recirculation bubble was observed between a trough and the following wave crest in the lee waves following the undular bore. This differs to stationary undular bores in laboratory experiments at larger Froude numbers where a recirculation bubble exists. Secondary motions and the turbulence generated by the undular bore had no measurable influence on the sediment transport. This situation contrasts with the intense sediment resuspension observed in breaking tidal bores. The tidally averaged sediment budget in the Daly Estuary was controlled by the asymmetry of tidal currents. The undular bore may widen the river by breaking along the banks that it undercuts, leading to bank slippage. A patch of river-wide macro-turbulence of 3-min duration occurred about 20 min after the passage of the bore during accelerating tidal currents.     

A hypothesis for the formation of a mud bank in the Gulf of Papua

The riverine mud that escapes retention in the estuaries and enters the Gulf of Papua appears to be transported southeastward, across depth contours, by the prevailing currents in a series of wind-driven events. The mud deposits to the southeast of the rivers, at the mid-shelf region within a depth range of 40–60 m. Mud transported farther eastward is carried down the continental rise. Coarser riverine sediment (silt and sand) is deposited closer inshore. On the outer shelf (depth >60 m) relict carbonate debris dominates. The area of mud has maximum rates of pelagic and benthic productivity in the gulf.     

Importance of wave-induced bed liquefaction in the fine sediment budget of Cleveland Bay,Great Barrier Reef

Data from a three-year long field study of fine sediment dynamics in Cleveland Bay show that wave-induced liquefaction of the fine sediment bed on the seafloor in shallow water was the main process causing bed erosion under small waves during tradewinds, and that shear-induced erosion prevailed during cyclonic conditions. These data were used to verify a model of fine sediment dynamics that calculates sediment resuspension by both excess shear stress and wave-induced liquefaction of the bed. For present land-use conditions, the amount of riverine sediments settling on the bay may exceed by 50–75% the amount of sediment exported from the bay. Sediment is thus accumulating in the bay on an annual basis, which in turn may degrade the fringing coral reefs. For those years when a tropical cyclone impacted the bay there may be a net sediment outflow from the bay. During the dry, tradewind season, fine sediment was progressively winnowed out of the shallow, reefal waters.     

The way forward with ecosystem-based management in tropical contexts: Reconciling with existing management systems

This paper discusses some of the challenges and opportunities that can arise when implementing ecosystem-based management (EBM) in tropical nations. EBM creates a new series of challenges, problems, and opportunities that must be considered in light of existing governance and management frameworks in a local context. The paper presents five case studies from different parts of the tropical world, including Oceania, insular and continental Southeast Asia, East Africa, and the Caribbean, which illustrate that the implementation of EBM in watershed and marine ecosystems offers a new series of challenges and opportunities for its inclusion with existing forms of environmental governance and management. The paper suggests that EBM is best thought of as an expansion of customary management (CM) and integrated coastal management (ICM), rather than a paradigm shift, and that it has certain benefits that are worth integrating into existing systems when possible. The paper concludes that the cultural and institutional context of CM as well as the experience, technical skills, and legal basis that serve ICM programs are logical platforms from which to build EBM programs. Some guidelines for creating hybrid management regimes are suggested. In sum, declining marine species and ecosystems require urgent action, necessitating utilization of existing paradigms such as ICM and CM as a foundation for building EBM.     

Flow separation and vertical motions in a tidal flow interacting with a shallow-water island

This paper reports on the case study of Rattray Island (Great Barrier Reef, northeast Australia), lying perpendicular to tidal flow in shallow waters. At ebb and flood, attached (stable) eddies develop in the wake where swirls of turbidity suggest that sediment-laden waters are brought to the surface as a result of vertical transport. Both eddy and tip upwellings are encountered in the tidal flow around Rattray Island but there is currently no clear-cut answer as to which secondary flow generates upwelling with the largest intensity. This paper addresses this specific issue through idealized and realistic high-resolution numerical experiments. The analysis is supported by physical arguments based on the theory of flow separation. Given Rattray's geometry and surrounding bathymetry, the mechanism of flow separation in shallow waters helps explain the asymmetry in size of the eddies and their intensity. The results of idealized numerical experiments also suggest that eddy and tip upwellings may be of similar intensity at Rattray Island.     

Wet season fine sediment dynamics on the inner shelf of the Great Barrier Reef

Fine sediment dynamics were recorded in February 2007 in coastal waters of the Great Barrier Reef during a moderate flood of the Tully River. An estuarine circulation prevailed on the inner continental shelf with a surface seaward velocity peaking at 0.1 m s⁻¹ and a near-bottom landward flow peaking at 0.05 m s⁻¹. Much of the riverine mud originating from eroded soils was exported onto a 10 km wide coastal strip during the rising stage of the river flood in the first flush. In coastal waters, suspended sediment concentration peaked at 0.2 kg m⁻³ near the surface and 0.4 kg m⁻³ at 10 m depth during calm weather, and 0.5 kg m⁻³ near the surface and 2 kg m⁻³ at 10 m depth during strong winds when bottom sediment was resuspended. Diurnal irradiance at 4 m depth was almost zero for 10 days. The sedimentation rate averaged 254 (±33) g m⁻² d⁻¹ over the 28-day study period, and concentrations of dissolved and particulate nutrients originating from the river were high. The observed low irradiance would have prevented coral photosynthesis, while the sedimentation rate would have been lethal to some juvenile corals. The mud may ultimately be minnowed out over long periods, however, flushing of the mud occurs at time scales much longer than the flood event and the mud is likely to affect coral physiology for significant periods after the flood has subsided. The data show the need to better control erosion on farmed land for the conservation of coral reefs on the inner shelf of the Great Barrier Reef.     

Dynamics of hypersaline coastal waters in the Great Barrier Reef

The coastal waters of the Great Barrier Reef (GBR) are hypersaline (salinity ∼37) during the dry season as a result of evaporation greatly exceeding rainfall, of shallow waters, and of the presence of numerous bays along the coast preventing rapid flushing. These hypersaline waters are not flushed out by salinity-driven baroclinic currents because these waters are vertically well-mixed. Instead these waters are transported by a longshore residual current and thus form a coastal boundary layer of hypersaline waters. As a result the hypersalinity distribution is 2-D with both cross-shelf and longshore gradients of salinity. The cross-shelf gradients are largely controlled by turbulent diffusion, while the longshore gradients are controlled by the residual currents that transport hypersaline waters longshore south ward in the central and southern regions of the GBR. Because every bay supplies hypersaline waters, the width of the coastal hypersaline layer increases southwards. Steady state is reached in about 100 days, which is the typical duration of the dry season. The dynamics of the GBR hypersaline coastal boundary layer thus differ from the classical inverse hypersaline systems, e.g. in Saloum River Estuary, Laguna San Ignacio, Mission Bay, Tomales Bay, San Diego Bay, Hervey Bay, Shark Bay, Coorong Coast Lagoon, Spencer Gulf, Gulf of California and many others where the salinity gradient is mainly 1-D with a dominant along-channel salinity gradient.     

Terrestrial pollutant runoff to the Great Barrier Reef: An update of issues, priorities and management responses

The Great Barrier Reef (GBR) is a World Heritage Area and contains extensive areas of coral reef, seagrass meadows and fisheries resources. From adjacent catchments, numerous rivers discharge pollutants from agricultural, urban, mining and industrial activity. Pollutant sources have been identified and include suspended sediment from erosion in cattle grazing areas; nitrate from fertiliser application on crop lands; and herbicides from various land uses. The fate and effects of these pollutants in the receiving marine environment are relatively well understood. The Australian and Queensland Governments responded to the concerns of pollution of the GBR from catchment runoff with a plan to address this issue in 2003 (Reef Plan; updated 2009), incentive-based voluntary management initiatives in 2007 (Reef Rescue) and a State regulatory approach in 2009, the Reef Protection Package. This paper reviews new research relevant to the catchment to GBR continuum and evaluates the appropriateness of current management responses.