Phytoplankton production in two east coast estuaries: Photosynthesis-light functions and patterns of carbon assimilation in Chesapeake and Delaware Bays

Chesapeake Bay is a large and productive estuary that has received close scrutiny in recent years because of indications that its water quality and biota have been damaged by man's activities. Data on primary production for the estuary as a whole, however, are surprisingly sparse. We describe here the distribution of photosynthetic carbon assimilation by phytoplankton in Chesapeake Bay, and relate productivity patterns to hydrographic characteristics of the estuary. Between March 1982 and April 1983, a series of four cruises was conducted on Chesapeake Bay, and two cruises on the urbanized Delaware Bay for comparison. The upper Chesapeake and Delaware were highly turbid with high concentrations of suspended particulate matter and dissolved inorganic nutrients. Low chlorophyll concentrations were usually found in these areas of high turbidity, despite the abundance of nutrients, suggesting light limitation. Application of Wofsy's (1983) model of phytoplanton growth confirmed this suggestion. Chlorophyll and productivity maxima usually occurred seaward of the turbidity maxima where light penetration increased and suffient nutrients were present to support active phytoplankton growth. Further seaward of the chlorophyll maxima in the Chesapeake, the photic zone depth increased, concentrations of nutrients decreased, and phytoplankton biomass decreased, suggesting that nutrient availability, rather than light, controlled phytoplankton growth in the lower portion of the estuary. In contrast to the Chesapeake, Delaware Bay was more turbid, had generally higher nutrient concentrations, and was lower in phytoplankton productivity. The chlorophyll maxima and region of rapid phytoplankton growth occurred further toward the lower estuary and shelf regions in Delaware Bay because the high turbidity extended further seaward. Nutrients were never depleted at the shelf end of the estuary sufficiently to retard phytoplankton growth. Photosynthesis-irradiance (P-I) curves from simulated in situ and constant intensity incubations showed a strong correlation of the light-limited slope (a^B) with the light-saturated rate ( ) on each cruise. Spatial variations in corresponded to patterns of phytoplankton abundance, as did integral production (PP) and carbon-based growth rates (μ_C, μ_m), and photosynthetic parameters varied significantly with temperature.     

Particulate and dissolved amino acids in the lower Mississippi and Pearl Rivers (USA)

In this study, we present seasonal changes (monthly samples from September 2001 to August 2003) in the abundance and composition of dissolved and particulate amino acids, at one station in the lower Mississippi and Pearl Rivers (LA, MS: USA). Spatial changes over a 4-day transmit from river km 390 to river mouth (Head of Passes, LA) in the Mississippi River, and a two-day downstream sampling from Jackson (MS) to Stennis Space Center (MS) were also determined. Temporal data in the lower Mississippi River showed significantly lower concentrations of dissolved combined amino acids (DCAA, 0.8 to 2.2 μM) and dissolved amino acids in high molecular weight fraction (HMW DAA, 0.2–0.4 μM) than in the Pearl River (DCAA, 1.4–4.3 μM; HMW DAA, 0.4–1.4 μM). Dissolved free amino acids (DFAA) were significantly lower than DCAA in both rivers, and displayed minimal seasonal variability. DCAA, HMW DAA, and particulate amino acids (PAA) were generally higher during high-flow periods, which may have suggested dominance in terrestrial sources. Carbon-normalized yield of PAA (%C-PAA) was generally higher during low-flow conditions and positively correlated with chlorophyll-a (chl-a), reflective of in situ sources. Downstream variability in the lower Mississippi River showed stable DCAA concentrations, a decline in PAA (from 1.06 to 0.43 μM), and a gradual increase in mole percent of non-protein amino acids (%NPAA). This likely reflected bacterial degradation of phytoplankton biomass during falling discharge. Nitrogen-normalized yield of PAA (%N-PAA) was inversely correlated with PAA (R = − 0.7, n = 48), indicative of short-term sedimentation and resuspension events. Conversely, downstream decreases in DCAA and middle-reach peaks of PAA and %N-PAA in the Pearl River, likely resulted from photochemical degradation of DOM as well as algal production during base-flow conditions. The comparisons in abundance and composition of DAA and PAA in these different river systems provides important information on in situ nitrogen and carbon cycling as related to riverine inputs of organic matter to coastal ocean.     

Side-scan and acoustic subbottom characterization of the sea floor near the Dry Tortugas, Florida

 Between 2 and 6 February, 1995, a 25 km² area at the Dry Tortugas (Florida Keys) was surveyed with a 100 kHz side-scan sonar system and 3.5-kHz subbottom profiler. The side-scan system revealed a pattern of alternating high and low backscatter. The subbottom profiler showed areas with no acoustic penetration between sediment troughs. The combination of both methods allowed delineation of the boundaries in high-backscatter regions, and sediment samples allowed correlations between high backscatter and coarser-grained sediments.     

A wave model for the Great Barrier Reef

A new wind wave generation model, WAMGBR, is presented that has been adapted from WAM especially for use in the complex geometry of the Great Barrier Reef. A technique (reef parameterization) has been presented that incorporates sub-grid scale dissipation caused by coral reefs. Three other improvements to WAM have been proposed. An explicit/implicit finite difference scheme has been implemented that allows for more efficient modelling (longer time steps) while maintaining diffusive characteristics that are at least as good as those of WAM. An offset in discrete angles creates more uniform diffusive characteristics. And, a transformed spherical coordinate system allows for more efficient grid sizes and smaller grid dependent refraction. Comparisons between modelling techniques and between model and measured data show that WAMGBR produces very good results in the difficult challenge of modelling both non-cyclonic and tropical cyclone waves in the geographically complex environment of the Great Barrier Reef.     

Reproductive life history stages sensitive to oil and naphthalene in Atlantic croaker

The reproductive effects of chronic exposure to water-soluble fractions (WSF) of diesel fuel oil and naphthalene in female Atlantic croaker during critical periods of their reproductive life history were investigated. Fish were repeatedly exposed to WSF of oil (2.5 or 5%) or naphthalene (0.5 or 1.0 ppm) for 5 or 8 weeks. Both pollutants blocked sexual maturation in some fish and impaired ovarian recrudescence in others. The majority of the oocytes in exposed fish were undeveloped and widespread oocyte atresia was evident at higher concentrations of these polycyclic aromatic hydrocarbons (PAH). The disruption of ovarian growth and oocyte development in croaker after PAH exposure was associated with alterations in reproductive endocrine function at multiple sites on the hypothalamus-pituitarygonadal axis. A third period of increased sensitivity to xenobiotics was observed during final oocyte maturation.     

A note on first-order normalizations of perturbed Keplerian systems

Techniques are developed to facilitate the transformation of a perturbed Keplerian system into Deláunay normal form at first order. The implicit dependence of the Hamiltonian on 1, the mean anomaly, through the explicit variable f, the true anomaly, or E, the eccentric anomaly, is removed through first order for terms of the form:

Charge-coupled device imaging spectroscopy of Mars. 1. Instrumentation and data reduction/analysis procedures

This paper describes the collection, reduction, and analysis of 0.4–1.0 m Mars imaging spectroscopy data obtained during the 1988 and 1990 oppositions from Mauna Kea Observatory and provides a general outline for the acquisition and analysis of similar imaging spectroscopy data sets. The U.H. 2.24-m Wide Field Grism CCD Spectrograph was used to collect 13 three-dimensional image cubes covering 90% of the planet south of 50°N in the 0.4–0.8 m region (/=245 at 0.6 m) and covering 55% of the planet south of 50°N in the 0.5–1.0 m region (/=293 at 0.75 m). Spectra extracted from these image cubes reveal the detailed character of the martian near-UV to visible spectrum. Images at red wavelengths reveal the classical albedo markings at 100–500 km spatial resolution while images at blue wavelengths show little surface feature contrast and are dominated by condensate clouds/hazes and polar ice. Many of the data acquisition, reduction, and analysis steps discussed here are new or unique to imaging spectroscopy data sets. These techniques exploit the information contained within the spatial domain of data such as these, thus allowing more traditional point-spectral analysis techniques to be expanded into an imaging format.     

Composition-Induced Variations in SIMS Instrumental Mass Fractionation during Boron Isotope Ratio Measurements of Silicate Glasses

An analytical artefact is reported here related to differences in instrumental mass fractionation between NIST SRM glasses and natural geological glasses during SIMS boron isotope determinations. The data presented demonstrated an average 3.4‰ difference between the NIST glasses and natural basaltic to rhyolitic glasses mainly in terms of their sputtering-induced fractionation of boron isotopes. As no matrix effect was found among basaltic to rhyolitic glasses, instrumental mass fractionation of most natural glass samples can be corrected by using appropriate glass reference materials. In order to confirm the existence of the compositionally induced variations in boron SIMS instrumental mass bias, the observed offset in SIMS instrumental mass bias has been independently reproduced in two laboratories and the phenomenon has been found to be stable over a period of more than one year. This study highlights the need for a close match between the chemical composition of the reference material and the samples being investigated.