Effect of organic matter source and salinity on dissolved organic matter isolation via ultrafiltration and solid phase extraction

In this study, samples were taken from three contrasting freshwater sources and amended with salt in order to determine the influence of salinity and dissolved organic matter (DOM) composition on DOM recovery via ultrafiltration and solid phase extraction (SPE) with C₁₈ disks. Salt addition caused variable recovery of DOM when using C₁₈ SPE, and ultraviolet–visible spectroscopic characterization of the extracted material showed spectral responses that varied among sample sources. In contrast, increasing sample salinity from 0 to 30 ppt consistently caused a 15–25% reduction in the amount of high molecular weight DOM isolated by ultrafiltration for both dissolved organic carbon (DOC) and chromophoric DOM (CDOM), regardless of DOM composition. We hypothesize that a change in conformation (such as coiling or disaggregation) of DOM molecules occurs in the presence of salt, allowing them to pass through the ultrafiltration membrane and thereby decreasing the DOM retained by ultrafiltration. These results are important because they demonstrate that changes in salinity can influence DOM recovery in estuaries. Interpretation of DOM characteristics along estuarine gradients needs to account for potential artifacts introduced by sample isolation techniques.     

Analysis of bacterial diversity and metals in produced water, seawater and sediments from an offshore oil and gas production platform

Produced water is one of the largest waste products routinely discharged into the ocean from offshore oil and gas platforms. This study analyzed bacterial communities and metals in the produced water, surrounding seawater, and sediment around the Thebaud platform. The bacterial community within the produced water was different from the seawater (SAB = 13.3), but the discharge had no detectable effect on the bacterial communities in the seawater (SAB > 97). In contrast, genomic analysis of sediments revealed that the bacterial community from 250 m was different (SAB = 70) from other locations further from the discharge, suggesting that the produced water had a detectable effect on the bacterial community in the sediment closest to the discharge. These near-field sediments contained elevated concentrations of manganese and iron that are associated with the produced water effluent. The results suggested that the discharge of produced water has influenced the bacterial community structure of sediments adjacent to the platform.     

Factors Determining the Location of the Chlorophyll Maximum and the Fate of Algal Production within the Tidal Freshwater James River

Longitudinal variation in factors affecting phytoplankton production were analyzed to better understand the mechanisms that cause the formation of a chlorophyll maximum within the tidal freshwater James River. Phytoplankton production was two- to threefold higher in the region where persistent elevated chlorophyll concentrations occurred. Near this site, the morphology of the James transitions from a narrow, deep channel to a broad expanse with shallow areas adjoining the main channel. Shallower depths resulted in greater average irradiance within the water column and suggest that release from light limitation was the principal factor accounting for the location of the chlorophyll maximum. Grazing rates were low indicating that little of the algal production was directly consumed by zooplankton. Low exploitation by zooplankton was attributed to poor food quality due to high concentrations of non-algal particulate matter and potential presence of cyanobacteria. Metabolism data suggest that two thirds of net primary production was respired in the vicinity of the chlorophyll maximum and one third was exported via fluvial and tidal advection. Comparison of water column and ecosystem metabolism indicates that the bulk of respiration occurred within the sediments and that sedimentation was the dominant loss process for phytoplankton.     

Glacial ice cores: A model system for developing extraterrestrial decontamination protocols

Evidence gathered from spacecraft orbiting Mars has shown that water ice exists at both poles and may form a large subsurface reservoir at lower latitudes. The recent exploration of the martian surface by unmanned landers and surface rovers, and the planned missions to eventually return samples to Earth have raised concerns regarding both forward and back contamination. Methods to search for life in these icy environments and adequate protocols to prevent contamination can be tested with earthly analogues. Studies of ice cores on Earth have established past climate changes and geological events, both globally and regionally, but only recently have these results been correlated with the biological materials (i.e., plant fragments, seeds, pollen grains, fungal spores, and microorganisms) that are entrapped and preserved within the ice. The inclusion of biology into ice coring research brings with it a whole new approach towards decontamination. Our investigations on ice from the Vostok core (Antarctica) have shown that the outer portion of the cores have up to 3 and 2 orders of magnitude higher bacterial density and dissolved organic carbon (DOC) than the inner portion of the cores, respectively, as a result of drilling and handling. The extreme gradients that exist between the outer and inner portion of these samples make contamination a very relevant aspect of geomicrobiological investigations with ice cores, particularly when the actual numbers of ambient bacterial cells are low. To address this issue and the inherent concern it raises for the integrity of future investigations with ice core materials from terrestrial and extraterrestrial environments, we employed a procedure to monitor the decontamination process in which ice core surfaces are painted with a solution containing a tracer microorganism, plasmid DNA, and fluorescent dye before sampling. Using this approach, a simple and direct method is proposed to verify the authenticity of geomicrobiological results obtained from ice core materials. Our protocol has important implications for the design of life detection experiments on Mars and the decontamination of samples that will eventually be returned to Earth.     

A NEW CHALLENGE FOR CLIMATE STUDIES IN GEOGRAPHY

Greater emphasis is being placed on large-scale (synoptic and dynamic) climatology in geography. Concurrently, climatological research as a whole has evolved to view climate as a complex, integrated and interactive global system. In this context, we review new directions in large-scale climate studies in geography. We conclude that no matter at which climatic scale geographers are working, the new challenge is to integrate their research and teaching activities into a more holistic, global-systems approach while maintaining and improving their traditional strengths.     

Regional Correspondence in Habitat Occupancy by Gray Snapper (Lutjanus griseus) in Estuaries of the Southeastern United States

Reef fishes, such as gray snapper, support important recreational and commercial fisheries and use a variety of habitats throughout ontogeny. Gray snapper juveniles may be found in estuarine nursery areas, such as seagrass beds, or mangrove shorelines, while adults are most often found in deep channels and farther offshore, associated with hard-bottom habitats. Juvenile and subadult gray snapper were collected from 1996 through 2009 during long-term fishery-independent monitoring of several estuarine systems along the Gulf and Atlantic coasts of Florida. Indices of abundance and habitat suitability were constructed for gray snapper to determine size-specific relationships between abundance, habitat, and environmental conditions. Juvenile and subadult gray snapper were collected year-round only in the southernmost estuaries but were most common from July through December in all estuaries sampled. In addition to timing of estuarine occupancy, abundance varied with latitude; gray snapper were more frequently collected in warmer, southern estuaries. In general, gray snapper were most abundant in euhaline areas with a high percentage of submerged aquatic vegetation (SAV) and, in most cases, where overhanging shoreline vegetation was also present. Annual abundance varied over the sampling period, with some juvenile peaks in abundance translating to subadult peaks in subsequent years. Although strong correspondence between juvenile and subadult populations was not observed in all systems, long-term, broad-scale habitat selection patterns as described in this study are critical to more effectively assess populations of estuarine-dependent species.     

Fuzzy representation of geographical boundaries in GIS

Abstract

Polygon boundaries on thematic maps are conventionally considered to be sharp lines representing abrupt changes of phenomena. However, in reality changes of environmental phenomena may also be partial or gradual. Indiscriminate use of sharp lines to represent different types of change creates a problem of boundary inaccuracy. Specifically, in the context of vector-based GIS, use of sharp lines to represent gradual or partial changes may cause misunderstanding of geographical information and reduce analysis accuracy.

In this paper, the expressive inadequacy of the conventional vector boundary representation is examined. A more informative technique—the fuzzy representation of geographical boundaries—is proposed, in which boundaries describe not only the location but also the rate of change of environmental phenomena. Four methods of determining fuzzy boundary membership grades from different kinds of geographical data are described. An example of applying the fuzzy boundary technique to data analysis is presented and the advantages of the technique are discussed.