Toward exploratory analysis of diversity unified across fields of study: an information visualization approach

The study of the diversity of multivariate objects shares common characteristics and goals across disciplines, including ecology and organizational management. Nevertheless, subject-matter experts have adopted somewhat separate diversity concepts and analysis techniques, limiting the potential for sharing and comparing across disciplines. Moreover, while large and complex diversity data may benefit from exploratory data analysis, most of the existing techniques emphasize confirmatory analysis based on statistical metrics and models. This work aims to bridge these gaps. First, by cross comparing the analyses of species diversity, microbial diversity, and workgroup diversity, we introduce a framework of diversity concerns aligned across the three areas. The alignment framework is validated and refined by feedback from subject-matter experts. Then, guided by the framework and theoretical information visualization and visual analytics principles (as distinguished from scientific visualization), we propose a unified taxonomy of common analytical tasks for exploration of diversity.     

Solar Rotational Periodicities and the Semiannual Variation in the Solar Wind, Radiation Belt, and Aurora

The behavior of a number of solar wind, radiation belt, auroral and geomagnetic parameters is examined during the recent extended solar minimum and previous solar cycles, covering the period from January 1972 to July 2010. This period includes most of the solar minimum between Cycles 23 and 24, which was more extended than recent solar minima, with historically low values of most of these parameters in 2009. Solar rotational periodicities from 5 to 27 days were found from daily averages over 81 days for the parameters. There were very strong 9-day periodicities in many variables in 2005?–?2008, triggered by recurring corotating high-speed streams (HSS). All rotational amplitudes were relatively large in the descending and early minimum phases of the solar cycle, when HSS are the predominant solar wind structures. There were minima in the amplitudes of all solar rotational periodicities near the end of each solar minimum, as well as at the start of the reversal of the solar magnetic field polarity at solar maximum (～?1980, ～?1990, and ～?2001) when the occurrence frequency of HSS is relatively low. Semiannual equinoctial periodicities, which were relatively strong in the 1995?–?1997 solar minimum, were found to be primarily the result of the changing amplitudes of the 13.5- and 27-day periodicities, where 13.5-day amplitudes were better correlated with heliospheric daily observations and 27-day amplitudes correlated better with Earth-based daily observations. The equinoctial rotational amplitudes of the Earth-based parameters were probably enhanced by a combination of the Russell-McPherron effect and a reduction in the solar wind-magnetosphere coupling efficiency during solstices. The rotational amplitudes were cross-correlated with each other, where the 27-day amplitudes showed some of the weakest cross-correlations. The rotational amplitudes of the >?2 MeV radiation belt electron number fluxes were progressively weaker from 27- to 5-day periods, showing that processes in the magnetosphere act as a low-pass filter between the solar wind and the radiation belt. The A _p/K _p magnetic currents observed at subauroral latitudes are sensitive to proton auroral precipitation, especially for 9-day and shorter periods, while the A _p/K _p currents are governed by electron auroral precipitation for 13.5- and 27-day periodicities.     

METHODOLOGY: A DEVICE FOR MONITORING SOIL MOVEMENT IN PEATLANDS

Traditional methods of tracking soil movements may be unreliable in soils containing a large proportion of organic matter owing to the composition and mechanical properties of peat. A simple, inexpensive, and reusable “anchored” target can be used to monitor both vertical and horizontal components of soil movement in fibrous peat. The target is unlikely to be affected adversely by flooding, frost heave, or animal disturbance, and is applicable to a wide range of geomorphic problems in peatlands. [Key words: frost heave, peat, peat landforms, soil movement, survey targets.]     

U–Pb Zircon Age Constraining the Source and Provenance of Gem‐Bearing Late Cenozoic Detrital Deposits,Mamfe Basin,SW Cameroon

Zircons and other heavy minerals (corundum, rutile, ilmenite, magnetite, sillimanite) are identified in the Nsanaragati gem corundum placer deposit, in the western part of the Mamfe sedimentary basin, SW Cameroon. These alluvial minerals have different morphological characteristics and zircons, in particular, vary mostly in colour and shape. They are reddish, brownish, yellowish, pink or colourless. These minerals form rounded and sub‐rounded alluvial grains, prismatic, pyramidal or dipyramidal crystals. Reddish zircons retain their original crystallographic shape. Trace element and U–Pb isotopic geochemical analyses of these reddish zircons, using the LA‐ICP‐MS method give significant Hf (4576–6334 ppm), Th (46–1565 ppm) and U (66–687 ppm) contents, with Th/U ratio ranging from 0.6 to 3.0. The ²⁰⁶Pb/²³⁸U corrected mean age gave 12.39 ± 0.55 Ma, which characterizes an Upper Cenozoic (Serravallian) magmatic event. The zircons are probably sourced from a magmatic field in the South eastern boundary of the Cross River Formation. The Cameroon Volcanic Line of basaltic and alkaline lavas and intrusions which lie east of the Mamfe Basin mostly range in age from 37 Ma to <1 Ma. The zircons may also relate to the Mount Bambouto plateau lavas which lie northeast of the Mamfe sedimentary basin and have an eruptive age range of 21–14 Ma. The oldest Nsanaragati reddish zircon ages overlap within error with the end stages of the Bambouto eruptions. This eruptive or a related episode provides a potential source for megacrystic reddish zircons within the Nsanagarati placer deposit.     

Cross-borehole flow analysis to characterize fracture connections in the Melechov Granite, Bohemian-Moravian Highland, Czech Republic

Application of the cross-borehole flow method, in which short pumping cycles in one borehole are used to induce time-transient flow in another borehole, demonstrated that a simple hydraulic model can characterize the fracture connections in the bedrock mass between the two boreholes. The analysis determines the properties of fracture connections rather than those of individual fractures intersecting a single borehole; the model contains a limited number of adjustable parameters so that any correlation between measured and simulated flow test data is significant. The test was conducted in two 200-m deep boreholes spaced 21?m apart in the Melechov Granite in the Bohemian-Moravian Highland, Czech Republic. Transient flow was measured at depth stations between the identified transmissive fractures in one of the boreholes during short-term pumping and recovery periods in the other borehole. Simulated flows, based on simple model geometries, closely matched the measured flows. The relative transmissivity and storage of the inferred fracture connections were corroborated by tracer testing. The results demonstrate that it is possible to assess the properties of a fracture flow network despite being restricted to making measurements in boreholes in which a local population of discrete fractures regulates the hydraulic communication with the larger-scale aquifer system.     

Using Ancillary Information to Improve Hypocenter Estimation: Bayesian Single Event Location (BSEL)

We have developed and tested an algorithm, Bayesian Single Event Location (BSEL), for estimating the location of a seismic event. The main driver for our research is the inadequate representation of ancillary information in the hypocenter estimation procedure. The added benefit is that we have also addressed instability issues often encountered with historical NLR solvers (e.g., non-convergence or seismically infeasible results). BSEL differs from established nonlinear regression techniques by using a Bayesian prior probability density function (prior PDF) to incorporate ancillary physical basis constraints about event location. P-wave arrival times from seismic events are used in the development. Depth, a focus of this paper, may be modeled with a prior PDF (potentially skewed) that captures physical basis bounds from surface wave observations. This PDF is constructed from a Rayleigh wave depth excitation eigenfunction that is based on the observed minimum period from a spectrogram analysis and estimated near-source elastic parameters. For example, if the surface wave is an Rg phase, it potentially provides a strong constraint for depth, which has important implications for remote monitoring of nuclear explosions. The proposed Bayesian algorithm is illustrated with events that demonstrate its congruity with established hypocenter estimation methods and its application potential. The BSEL method is applied to three events: 1) A shallow Mw 4 earthquake that occurred near Bardwell, KY on June 6, 2003, 2) the Mw 5.6 earthquake of July 26, 2005 that occurred near Dillon, MT, and 3) a deep Mw 5.7 earthquake that occurred off the coast of Japan on April 22, 1980. A strong Rg was observed from the Bardwell, KY earthquake that places very strong constraints on depth and origin time. No Rg was observed for the Dillon, MT earthquake, but we used the minimum observed period of a Rayleigh wave (7 seconds) to reduce the depth and origin time uncertainty. Because the Japan event was deep, there is no observed surface wave energy. We utilize the prior generated from the Dillon, MT event to show that even in the case when a prior is inappropriately applied, high quality data will overcome its influence and result in a reasonable hypocenter estimate.     

Imaging Pathways in Fractured Rock Using Three‐Dimensional Electrical Resistivity Tomography

Major challenges exist in delineating bedrock fracture zones because these cause abrupt changes in geological and hydrogeological properties over small distances. Borehole observations cannot sufficiently capture heterogeneity in these systems. Geophysical techniques offer the potential to image properties and processes in between boreholes. We used three‐dimensional cross borehole electrical resistivity tomography (ERT) in a 9 m (diameter) × 15 m well field to capture high‐resolution flow and transport processes in a fractured mudstone contaminated by chlorinated solvents, primarily trichloroethylene. Conductive (sodium bromide) and resistive (deionized water) injections were monitored in seven boreholes. Electrode arrays with isolation packers and fluid sampling ports were designed to enable acquisition of ERT measurements during pulsed tracer injections. Fracture zone locations and hydraulic pathways inferred from hydraulic head drawdown data were compared with electrical conductivity distributions from ERT measurements. Static ERT imaging has limited resolution to decipher individual fractures; however, these images showed alternating conductive and resistive zones, consistent with alternating laminated and massive mudstone units at the site. Tracer evolution and migration was clearly revealed in time‐lapse ERT images and supported by in situ borehole vertical apparent conductivity profiles collected during the pulsed tracer test. While water samples provided important local information at the extraction borehole, ERT delineated tracer migration over spatial scales capturing the primary hydrogeological heterogeneity controlling flow and transport. The fate of these tracer injections at this scale could not have been quantified using borehole logging and/or borehole sampling methods alone.     

Temporal variation of intertidal seagrass in southern China (2008–2014)

Understanding the temporal dynamics of seagrasses and the major influences on seagrass growth is critical for seagrass habitat conservation and administration. However, little work has been done regarding these issues in southern China. To examine inter-annual and seasonal variations of the intertidal Halophila ovalis community in southern China, we conducted quarterly sampling using the SeagrassNet methodology and assessed environmental conditions as well as direct anthropogenic impacts on the seagrass meadow from July 2008 to October 2014. Our study demonstrated strong inter-annual and seasonal dynamics of the intertidal seagrass meadow in the study area. Generally, the community performed best (highest seagrass cover, leaf area, shoot density, total biomass) in summer and worst in spring among the 4 seasons. The temporal variations in the seagrass community attributes (e.g. above-ground biomass) were significantly affected by precipitation, atmospheric visibility, and salinity, while leaf width was significantly negatively correlated with temperature, atmospheric visibility and salinity. Temperature was a major factor influencing the seagrass community (both macroalgae and seagrass), with temperature data showing an inverse relationship between seagrass and macroalgae. The above-ground: below-ground biomass ratio and leaf width of H. ovalis were the most sensitive plant parameters monitored when assessing environmental interactions. Human physical disturbances did not have a significant effect on seagrass dynamics in the study area. We concluded that long-term monitoring (like SeagrassNet) is valuable in understanding the relationship between environmental variables and seagrasses.     

Origin and Extent of Fresh Paleowaters on the Atlantic Continental Shelf, USA

While the existence of relatively fresh groundwater sequestered within permeable, porous sediments beneath the Atlantic continental shelf of North and South America has been known for some time, these waters have never been assessed as a potential resource. This fresh water was likely emplaced during Pleistocene sea-level low stands when the shelf was exposed to meteoric recharge and by elevated recharge in areas overrun by the Laurentide ice sheet at high latitudes. To test this hypothesis, we present results from a high-resolution paleohydrologic model of groundwater flow, heat and solute transport, ice sheet loading, and sea level fluctuations for the continental shelf from New Jersey to Maine over the last 2 million years. Our analysis suggests that the presence of fresh to brackish water within shallow Miocene sands more than 100 km offshore of New Jersey was facilitated by discharge of submarine springs along Baltimore and Hudson Canyons where these shallow aquifers crop out. Recharge rates four times modern levels were computed for portions of New England's continental shelf that were overrun by the Laurentide ice sheet during the last glacial maximum. We estimate the volume of emplaced Pleistocene continental shelf fresh water (less than 1 ppt) to be 1300 km³ in New England. We also present estimates of continental shelf fresh water resources for the U.S. Atlantic eastern seaboard (10⁴ km³) and passive margins globally (3 × 10⁵ km³). The simulation results support the hypothesis that offshore fresh water is a potentially valuable, albeit nonrenewable resource for coastal megacities faced with growing water shortages.