Vertical zonation and aggregated distribution of the Manila clam on subtidal sand flats in a coastal brackish lagoon along the Sea of Japan

The Manila clam, Ruditapes philippinarum, has maintained small‐sized populations in a semi‐enclosed brackish lake along the Sea of Japan, the Honjo area of Lake Nakaumi, although the environment and biota of this area have changed dramatically due to a large‐scale reclamation project. There should be underlying processes that enable the restoration of this species from small‐sized populations, such as the existence of source (i.e. reproductive) populations in other areas and depth zones of the lake. However, there has been no robust, properly designed evaluation of the distribution of the Manila clam in the subtidal sand flats. In order to elucidate the possible mechanisms that allow for the persistence of populations of the Manila clam, we examined the spatiotemporal and vertical variation in distributions of 0‐age clams in the subtidal zone of sand flats. Seasonal effects on population variations showed erratic changes among depth zones without a decreasing trend along the depth gradient. Further, many local populations became extinct even in the shallower zones due to seasonal (summer) hypoxia at deeper zones and hypoxia by the accumulation of key benthic species (Asian mussel and decaying macroalgae) in mats at shallower zones. A few surviving local populations were stable with a spatial‐fragmental (patchy) distribution, associated with fragmented accumulations of Asian mussels and macroalgae. Efforts to maintain stable populations and to restore this species in the subtidal area may depend on these small, restricted, patchy local populations. These findings suggest that high fertility and productivity of the Manila clam as well as patchy distribution of small populations may contribute to the maintenance of the population and the avoidance of extinction (by spatially diffusing the risk of extinction) in harsh environments resulting from the reclamation project.     

Records of environmental and ecological changes related to excavation in varve sediment from Lake Hiruga in central Japan

Journal of Paleolimnology - Sub-annual-scale environmental and ecosystem changes since the mid-18th century were reconstructed in a semi-closed lagoon, Lake Hiruga, located along the Sea of Japan...     

Hydraulic properties of and pressure-head dynamics in thick pyroclastic-fall deposits in Atsuma,Northern Japan: implications for the role of water in shallow landslides induced by the 2018 Hokkaido Eastern Iburi Earthquake

Landslides - The 2018 Hokkaido Eastern Iburi Earthquake triggered numerous shallow landslides on slopes covered with thick pyroclastic-fall deposits. The landslides occurred more frequently on...     

Microbial responses using denaturing gradient gel electrophoresis to oil and chemical dispersant in enclosed ecosystems

Microbial responses to the addition of oil with or without a chemical dispersant were examined in mesocosm and microcosm experiments by using denaturing gradient gel electrophoresis of bacterial ribosomal DNA and direct cell counting. When a water-soluble fraction of oil was added to seawater, increases in cell density were observed in the first 24h, followed by a decrease in abundance and a change in bacterial species composition. After addition of an oil-dispersant mixture, increases in cell density and changes in community structure coincided, and the amount of bacteria remained high. These phenomena also occurred in response to addition of only dispersant. Our results suggest that the chemical dispersant may be used as a nutrient source by some bacterial groups and may directly or indirectly prevent the growth of other bacterial groups.     

Biogeochemical contrasts between mid-Cretaceous carbonate platforms and Cenozoic reefs

Carbonate sediments of mid-Cretaceous platforms on Allison and Resolution Guyots, Mid-Pacific Mountains (ODP Leg 143, Sites 865, 866, 867 and 868) and those of upper Oligocene to Pliocene reefs of the Kita-daito-jima Borehole were studied. The mid-Cretaceous platforms abound with abiotic (?) precipitates (ooids) and microbial carbonate grains/sediments (oncoids and ‘algal’ laminites), whereas the Cenozoic reefs consist mainly of coral and non-geniculate coralline algae, major frame-builders, benthic foraminifers and codiacean alga (Halimeda). There exists a remarkable difference in a mode of calcification between the mid-Cretaceous platforms and Cenozoic reefs. The major reef-builders of Cenozoic reefs precipitated carbonates within closed to semiclosed spaces within their bodies. In contrast, the mid-Cretaceous platforms contain abundant grains/sediments formed by chemical (?) precipitations and biotic extracellular calcification. This contrasting feature reflects different modes of biogeochemical cycles between the mid-Cretaceous and Cenozoic. Increased CO₂ (degassed by active volcanism) and resultant high temperature and intensive weathering may have brought high concentration of Ca²⁺ and HCO₃^? into the mid-Cretaceous sea, which enhanced abiotic and extracellular calcification. Inverse processes are true for the Cenozoic.     

Application of common reflection angle migration for imaging deformation structures in an inner accretionary wedge,Nankai Trough,Japan

To better image deformation structures within the inner accretionary wedge of the Nankai Trough, Japan, we apply common reflection angle migration to a legacy two-dimensional seismic data set acquired with a 6 km streamer cable. In this region, many seismic surveys have been conducted to study the seismogenic zone related to plate subduction. However, the details of the accreted sediments beneath the Kumano forearc basin are still unclear due to the poor quality of seismic images caused by multiple reflections, highly attenuated signals, and possibly complex geological structures. Generating common image gathers in the subsurface local angle domain rather than the surface offset domain is more advantageous for imaging geological structures that involve complex wave paths and poor illumination. By applying this method, previously unseen structures are revealed in the thick accreted sediments. The newly imaged geometric features of reflectors, such as the folds in the shallow part of the section and the deep reflectors with stepwise discontinuities, imply deformation structures with multiple thrust faults. The reflections within the deep accreted sediments (approximately 5 km) are mainly mapped to far angles (30°–50°) in the common reflection angles, which correspond to the recorded offset distances greater than 4.5 km. This result indicates that the far offset/angle information is critical to image the deformation structures at depth. The new depth image from the common reflection angle migration provides seismic evidence of multiple thrust faults and their relationship with the megathrust fault that is essential for understanding the structure and evolution of the Nankai Trough seismogenic zone.     

Experimental study on the bidirectional inelastic deformation capacity of U‐shaped steel dampers for seismic isolated buildings

Hysteretic dampers are used to dissipate earthquake‐induced energy in base‐isolated structures by acquiring inelastic deformations, rendering their hysteretic behavior of vital importance. The present paper focuses on investigating the behavior of U‐shaped steel dampers under bidirectional loading; this is significantly different from their corresponding uniaxial behavior. Two main sets of loading tests on full‐scale specimens are conducted in this regard: (i) quasi‐static tests with simple histories and (ii) dynamic tests with realistic loading histories. Based on the results obtained in the quasi‐static tests, an interaction curve that accounts for the reduction of the cyclic deformation capacity is proposed. However, the fidelity of this relation must be assessed under loading conditions similar to those of a seismically isolated structure subjected to an earthquake, which represents the goal of the second set of tests. The results of the dynamic tests validate the proposed interaction curve for estimating the deformation capacity of U‐shaped steel dampers under bidirectional loading. Copyright © 2015 John Wiley & Sons, Ltd.     

Detection and temporal variation of Co in the digestive glands of the common octopus, Octopus vulgaris, in the East China Sea

⁶⁰Co were detected in common octopus specimens collected in the East China Sea in 1996-2005. The source of ⁶⁰Co has remained unclear yet. Stable isotope analyses showed that there was no difference in stable Co concentrations between octopus samples with ⁶⁰Co and without ⁶⁰Co. This result showed that the stable Co in the digestive gland of octopus potentially did not include a trace amount of ⁶⁰Co and the source of ⁶⁰Co existed independently. Furthermore, investigations of octopus in other area and other species indicated that the origin of the source of ⁶⁰Co occurred locally in the restricted area in the East China Sea and not in the coastal area of Japan. Concentrations of ⁶⁰Co have annually decreased with shorter half-life than the physical half-life. This decrease tendency suggests that the sources of ⁶⁰Co were identical and were temporary dumped into the East China Sea as a solid waste.     

Influence of shear angle on hangingwall deformation during tectonic inversion

Tectonic inversion is a common phenomenon in island arc settings, especially in back‐arc basins. The reactivation of normal faults as thrusts, triggered by tectonic inversion, produces typical inversion fault‐related folds and thrusts in the hangingwall. These hangingwall inversion geometries are affected by two factors: the geometry of the underlying master fault and the angle of inclined simple shear relative to the regional dip of strata, in the case that the deformation is approximated by simple shear. This study employed numerical simulations to analyse the influence of the antithetic shear angle on the geometry of the hangingwall and displacement along the master fault. The simulation results reveal that a steeply inclined shear vector during extension produces a narrow, steep‐sided half‐graben, whereas a gently inclined shear produces a wide, open basin. After tectonic inversion, a tight anticline is formed under steeply inclined shear, whereas an open anticline is formed under gently inclined shear. Antithetic shear results in reduced total displacement along the master fault, and the greater the angle between the shear direction and the regional dip, the greater the displacement along the master fault. Because the deformation geometry of syn‐extension layers is affected by extension followed by contraction, a change in the shear angle during tectonic inversion produces a wide variety of deformation geometries. Comparison of the simulation results with the results of analogue modelling suggests that the shear angle decreases by 5° during the transition from extension to tectonic inversion and that such a change may be commonly observed in natural geological structures. These results highlight the benefits of numerical simulations, which can be used to readily examine a variety of constraining parameters and thereby lead to a better understanding of the mechanism of hangingwall deformation, avoiding erroneous estimates of the amount of fault displacement.     

Dissecting large earthquakes in Japan: Role of arc magma and fluids

We synthesized information from recent high-resolution tomographic studies of large crustal earthquakes which occurred in the Japanese Islands during 1995–2008. Prominent anomalies of low-velocity and high Poisson's ratio are revealed in the crust and uppermost mantle beneath the mainshock hypocenters, which may reflect arc magma and fluids that are produced by a combination of subducting slab dehydration and corner flow in the mantle wedge. Distribution of 164 crustal earthquakes ( M 5.7–8.0) that occurred in Japan during 1885–2008 also shows a correlation with the distribution of low-velocity zones in the crust and uppermost mantle. A qualitative model is proposed to explain the geophysical observations recorded so far in Japan. We consider that the nucleation of a large earthquake is not entirely a mechanical process, but is closely related to the subduction dynamics and physical and chemical properties of materials in the crust and upper mantle; in particular, the arc magma and fluids.