波束角偏差对多波束测量的影响及校正

波束角偏差是影响多波束系统测量精度的因素之一,严重时导致测量的海底地形成凸凹形状的伪地形。论述了波束角偏差产生的原因以及对多波束系统测量精度的影响,介绍了借用EM系列多波束系统配置的横向参数校准软件对波束角偏差进行校正的方法,经实际应用,该方法很好地校正了波束角偏差,提高了测量数据的精度。     

Spatial heterogeneity of soil mineral oxide components in depression between karst hills,Southwest China

In karst regions,the spatial heterogeneity of soil mineral oxides and environmental variables is still not clear.We investigated the spatial heterogeneity of SiO2,Al2O3,Fe2O3,CaO,MgO,P2O5,K2O,and MnO contents in the soils of slope land,plantation forest,secondary forest,and primary forest,as well as their relationships with environmental variables in a karst region of Southwest China.Geostatistics,principal component analysis(PCA),and canonical correlation analysis(CCA)were applied to analyze the field data.The results show that SiO2was the predominant mineral in the soils(45.02%–67.33%),followed by Al2O3and Fe2O3.Most soil mineral oxide components had a strong spatial dependence,except for CaO,MgO,and P2O5in the plantation forest,MgO and P2O5in the secondary forest,and CaO in the slope land.Dimensionality reduction in PCA was not appropriate due to the strong spatial heterogeneity in the ecosystems.Soil mineral oxide components,the main factors in all ecosystems,had greater influences on vegetation than those of conventional soil properties.There were close relationships between soil mineral oxide components and vegetation,topography,and conventional soil properties.Mineral oxide components affected species diversity,organic matter and nitrogen levels.     

一种改进的车头SURF特征提取和匹配

通过对加速鲁棒性算法特征关键点提取和匹配的研究,提出一种改进的车头加速鲁棒性特征点提取方法,该方法在车头图像像素梯度变化较大的范围内提取关键点,然后采用最近邻比例算法进行特征点匹配。实验结果表明,提出的改进方法不仅能够筛选出鲁棒性较强的关键点,同时提高了特征的提取速度和匹配效率,在总时间上比尺度不变特征变换算法提高了3~6倍;比加速鲁棒性算法提高了近1/4。     

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Damage localization of marine risers using time series of vibration signals

Based on dynamic response signals a damage detection algorithm is developed for marine risers. Damage detection methods based on numerous modal properties have encountered issues in the researches in offshore oil community. For example, significant increase in structure mass due to marine plant/animal growth and changes in modal properties by equipment noise are not the result of damage for riser structures. In an attempt to eliminate the need to determine modal parameters, a data-based method is developed. The implementation of the method requires that vibration data are first standardized to remove the influence of different loading conditions and the autoregressive moving average (ARMA) model is used to fit vibration response signals. In addition, a damage feature factor is introduced based on the autoregressive (AR) parameters. After that, the Euclidean distance between ARMA models is subtracted as a damage indicator for damage detection and localization and a top tensioned riser simulation model with different damage scenarios is analyzed using the proposed method with dynamic acceleration responses of a marine riser as sensor data. Finally, the influence of measured noise is analyzed. According to the damage localization results, the proposed method provides accurate damage locations of risers and is robust to overcome noise effect.     

Estimating the Budgets of Nutrients for Phytoplankton Bloom in the Central Yellow Sea Using a Modified Lower Tropic Ecosystem ModelDOI 10.1007/s11802-014-1900-6

A modified lower trophic ecosystem model(NEMURO) is coupled with a three-dimensional hydrodynamic model for an application in the central Yellow Sea. The model is used to simulate the horizontal distributions and annual cycles of chlorophyll-a and nutrients with results consistent with historical observations. Generally, during the winter background and spring bloom periods, the exchange with neighboring waters constitutes the primary sources of nutrients. Howerver, during the winter background period, the input of silicate from the layer deeper than 50 m is the most important source that contributes up to 60% to the total sources. During the spring bloom period, the transport across the thermocline makes significant contribution to the input of phosphate and silicate. During the post spring bloom period, the relative contribution of relevant processes varies for different nutrients. For ammonium, atmospheric deposition, excretion of zooplankton and decomposition of particulate and dissolved nitrogen make similar contributions. For phosphate and silicate, the dominant input is the transport across the thermocline, accounting for 62% and 68% of the total sources, respectively. The N/P ratio averaged annually and over the whole southern Yellow Sea is up to 51.8, indicating the potential of P limitation in this region. The important influence of large scale sea water circulation is revealed by both the estimated fluxes and the corresponding N/P ratio of nutrients across a section linking the northeastern bank of the Changjiang River and Cheju Island. During the winter background period, the input of nitrate, ammonium, phosphate and silicate by the Yellow Sea Warm Current is estimated to be 4.6×1010, 2.3×1010, 2.0×109 and 1.2×1010 mol, respectively.     

Phylogenomic analysis of transcriptomic sequences of mitochondria and chloroplasts for marine red algae (Rhodophyta) in China

The chloroplast and mitochondrion of red algae （Phylum Rhodophyta） may have originated from different endosymbiosis. In this study, we carried out phylogenomic analysis to distinguish their evolutionary lin-eages by using red algal RNA-seq datasets of the 1 000 Plants （1KP） Project and publicly available complete genomes of mitochondria and chloroplasts of Rhodophyta. We have found that red algae were divided into three clades of orders, Florideophyceae, Bangiophyceae and Cyanidiophyceae. Taxonomy resolution for Class Florideophyceae showed that Order Gigartinales was close to Order Halymeniales, while Order Graci-lariales was in a clade of Order Ceramials. We confirmed Prionitis divaricata （Family Halymeniaceae） was closely related to the clade of Order Gracilariales, rather than to genus Grateloupia of Order Halymeniales as reported before. Furthermore, we found both mitochondrial and chloroplastic genes in Rhodophyta under negative selection （Ka/Ks〈1）, suggesting that red algae, as one primitive group of eukaryotic algae, might share joint evolutionary history with these two organelles for a long time, although we identified some dif-ferences in their phylogenetic trees. Our analysis provided the basic phylogenetic relationships of red algae, and demonstrated their potential ability to study endosymbiotic events.     

褐藻纲海带目Laminaria属和Saccharina属基于三个分子标记的系统发育分析

In the past two decades, many studies have focused on the classification within genus Laminaria, ultimately trying to divide it into two subgroups or genera: Laminaria and Saccharina. A significant debate still surrounds the question of its division, as the conflicting phylogenetic hypotheses that have resulted from the classification studies are based on different taxon sampling, molecular markers, or analysis methods. It is aimed at elucidate the molecular phylogeny within Laminaria and Saccharina. The nine species of Laminariales are sampled from northern Asia and Europe, and 23 new sequences in the nuclear, plastid, and mitochondrial genomes are determined to identify their taxonomic status. The phylogenetic analyses of 71 species are performed, including representatives from six of the seven families of the order Laminariales, based on three separate data sets. An evidence is provided to strongly support a clear split that maintains the two recognized genera, Laminaria and Saccharina, with Laminaria appearing to be the ancestor group. Further, analyses indicate that all taxa in Saccharina and Laminaria did not form a monophyletic lineage, instead Laminariaceae and Lessoniaceae grouped together interlacedly, and Costariaceae appeared as the sister taxon of the Lessoniaceae–Laminariaceae clade. In the phylogenetic analysis, mitochondrial c oxidase I(COI) sequences appeared to be the most credible molecular marker which was more befitting than nuclear encoded internal transcribed spacer(ITS) and plastid encoded rbcL for establishment of Laminariales systematics. It is the most comprehensive phylogeny of the order Laminariales, and contributes to an enhanced understanding and estimation of the phylogenetic relationships for the economically important seaweeds, Laminaria and Saccharina.     

杂色龙虾线粒体基因组全序列的测定与分析

为了解杂色龙虾(Panulirus versicolor)线粒体基因组多态位点及遗传变异,对龙虾类的分类研究奠定基础,作者通过常规PCR步移扩增法获得杂色龙虾线的线粒体基因组全序列,分析了其线粒体基因组的基本特征以及基因排列情况,并结合中国龙虾(Panulirus stimposni)、波纹龙虾(Panulirus homarus)线粒体基因组全序列,综合分析了龙虾属线粒体编码基因多态位点及基因变异状况。结果表明:杂色龙虾线粒体基因组全序列为15 700 bp,由13个蛋白质编码基因、22个t RNA基因、2个r RNA基因和D-loop区组成,保持了泛甲壳动物线粒体基因组的原始排列。杂色龙虾线粒体DNA的碱基组成具有AT偏好性,A+T含量为67%,4种碱基的含量分别为(A=34.6%,T=32.1%,C=20.5%,G=12.8%)。预测了杂色龙虾18个t RNA以及2个r RNA的二级结构。龙虾属线粒体基因组中的nad 2、nad 5基因以及D-loop区的多态位点比例较高,适合作为分子标记用于龙虾类系统进化关系、种内多态性以及遗传分化等方面的研究。