Rapid visualization of plankton abundance and taxonomic composition using the Video Plankton Recorder

Traditional methods for determining spatial distributions of planktonic taxa involve net, pump, and bottle collections followed by the tedious and time-consuming task of plankton sample analysis. Thus, plankton ecologists often require months or even years to process samples from a single study. In this paper, we present a method that allows rapid visualization of the distribution of planktonic taxa while at sea. Rapid characterization of plankton distributions is essential in the dynamic physical environment, where biological and physical patterns can change quickly. Such a “sample-and-observe” capability is necessary for mapping ephemeral features (such as patches, eddies, jets, plumes) and determining appropriate locations to conduct more localized sampling, including in situ observational studies. We describe the techniques used in imaging the plankton, analyzing the video, and visualizing the data. We present an example of at-sea data analysis conducted aboard R.V. Columbus Iselin on Georges Bank in May 1994 and visualizations of the 3-dimensional distribution of selected planktonic taxa in a 2 × 2 km × 90 m volume of seawater. A video of the image processing and visualization is included on the CD-ROM accompanying this volume and is an essential part of this paper.     

Comprehensive simulation of the middle atmospheric climate: some recent results

This study discusses the results of comprehensive time-dependent, three-dimensional numerical modelling of the circulation in the middle atmosphere obtained with the GFDL SKYHI troposphere-stratosphere-mesosphere general circulation model (GCM). The climate in a long control simulation with an intermediate resolution version (3° in horizontal) is briefly reviewed. While many aspects of the simulation are quite realistic, the focus in this study is on remaining first-order problems with the modelled middle atmospheric general circulation, notably the very cold high latitude temperatures in the Southern Hemisphere (SH) winter/spring, and the virtual absence of a quasi-biennial oscillation (QBO) in the tropical stratosphere. These problems are shared by other extant GCMs. It was noted that the SH cold pole problem is somewhat ameliorated with increasing horizontal resolution in the model. This suggests that improved resolution increases the vertical momentum fluxes from the explicitly resolved gravity waves in the model, a point confirmed by detailed analysis of the spectrum of vertical eddy momentum flux in the winter SH extratropics. This result inspired a series of experiments with the 3° SKYHI model modified by adding a prescribed zonally-symmetric zonal drag on the SH winter westerlies. The form of the imposed momentum source was based on the simple assumption that the mean flow drag produced by unresolved waves has a spatial distribution similar to that of the Eliassen-Palm flux divergence associated with explicitly resolved gravity waves. It was found that an appropriately-chosen drag confined to the top six model levels (above 0.35 mb) can lead to quite realistic simulations of the SH winter flow (including even the stationary wave fields) through August, but that problems still remain in the late-winter/springtime simulation. While the imposed momentum source was largely confined to the extratropics, it produced considerable improvement in the simulation of the equatorial semiannual oscillation, with both the easterly and westerly phases being somewhat more intense than in the control simulation. A separate experiment was conducted in which the SKYHI model was simplified so that it had no topography and so that the seasonal cycle was frozen in perpetual equinox conditions. These changes result in a model that has much reduced interhemispheric asymmetry. This model spontaneously produces a long period mean flow oscillation of considerable amplitude in the tropical upper stratopause. The implication of this result for the general issue of obtaining a QBO in comprehensive GCMs is discussed.     

Solar flare activity and the structure of the coronal neutral line

In this study we analyse the positions of major flares from 1978 and 1979, with respect to the magnetic structure of the solar corona, as described by a potential field model. We find that major flares exhibit no strong association with the neutral line at the chromospheric level. However, when we calculate the neutral line's position at higher and higher altitudes in the corona, we find that major flares show an increasing tendency to be found close to these high-altitude coronal neutral lines. The correlation between flares and higher-altitude coronal neutral lines reaches a maximum at an altitude of 0.35R , and thereafter decreases as the neutral line is moved out to the source surface at an altitude of 1.50R . This indicates that major flares are strongly associated with coronal structure at the 0.35R level ( 250 000 km) - an altitude surprisingly high in the corona. This reinforces the idea that flares are associated with large-scale coronal magnetic fields and also indicates that the region of coronal magnetic topology important to solar flare processes may be larger than previously thought.     

Properties of metre-wavelength solar bursts associated with interplanetary type II emission

A statistical analysis is used to determine the properties of metre-wavelength events which are associated with interplanetary type II bursts. It is found that the likelihood of an interplanetary type II burst is greatly increased if: (a) an associated metre-wavelength type II has a starting frequency less than 45 MHz; (b) a strong metre-wavelength continuum is present; (c) the type II contains herringbone fine structure; and (d) the metre-wavelength activity is accompanied by strong, long-lasting H and soft X-ray events.Visiting scientist at Division of Radiophysics, January 1983; previous address - NASA/Goddard Space Flight Center, Greenbelt, Maryland.     

A gravitational kinetic theory for planetesimals

An analytical theory is developed for the velocity evolution of nonaccreting planetesimal populations, based on the Boltzmann and Fokker-Planck equations. Adapting Shkarofsky's calculation of plasma viscosities, the rate of increase in random velocities due to gravitational encounters between planetesimals of equal mass is found to be one-third to one-half Safronov's result. Comparison with Wetherill's numerical experiments suggests that the Fokker-Planck equation underestimates the effectiveness of encounters and that Safronov's value is approximately correct. For populations of nonuniform sizes, the Fokker-Planck equation indicates an efficient redistribution of energy from the largest bodies to the smaller ones. By conserving angular momentum, the rate of radial spreading of orbits is also derived.     

Unusual coronal activity following the flare of 6 November 1980

For almost 30 hr after the major (gamma-ray) two-ribbon flare on 6 November 1980, 03:30 UT, the Hard X-Ray Imaging Spectrometer (HXIS) aboard the SMM satellite imaged in > 3.5 keV X-rays a gigantic arch extending above the active region over the limb. Like a similar configuration on 22 May 1980, this arch formed the lowest part of a stationary post-flare radio noise storm recorded at metric wavelengths at Nançay and Culgoora. 6.5 hr after the flare a coronal region below the arch started quasi-periodic pulsations in X-ray brightness, observed by several SMM instruments. These brightness variations had no response in the chromosphere (H), very little in the transition layer (O v), but they clearly correlated with similar variations in brightness at 169 MHz. There were 13 pulses of this kind, with apparent periodicity of about 20 min, until another flare occurred in the active region at 15:00 UT. All the brightenings appeared within a localized area of about 30000 km² in the northern part of the active region, but they definitely did not occur all at the same place.The top of the X-ray arch, at an altitude of 155 000 km, was continuously and smoothly decaying, taking no part in the striking variations below it. Therefore, the area variable in brightness does not seem to be the footpoint of the arch, as we supposed for similar variations on 22 May. More likely, it is a separate region connected directly with the source of the radio storm; particles accelerated in the storm may be dumped into the low corona and cause the X-ray enhancements. The X-ray arch was enhanced by two orders of magnitude in 3.5–5.5 keV X-ray counts and the temperature increased from 7.3 × 10⁶ to 9 × 10⁶ K when the new two-ribbon flare occurred at 15:00 UT. Thus, it is possible that energy is brought into the arch via the upper parts of the reconnecting flare loops - a process that can continue for hours.     

Book reviews

REGIONAL GEOGRAPHY: Current Developments and Future Prospects edited by R. J. Johnston, J Hauer and G. A. Hoekveld. 14 × 22 cm, xiii and 216 pages. Routledge: London 1990 (ISBN 0 415 05247 5) $A89.95 (hard).

THE MAKING OF THE AMERICAN LANDSCAPE edited by M. P. Conzen. 19 × 25 cm, xvi and 433 pages. Unwin Hyman: Boston 1990 (ISBN 0 04 917010 4) $A59.95 (soft).

EASTERN EUROPE: An Historical Geography 1815–1945 by D. Turnock. 14 × 22 cm, ix and 357 pages. Routledge: London 1989 (ISBN 0 415 01269 4) $A115.00 (hard), distributed by the Law Book Co.

THE HUMAN GEOGRAPHY OF EASTERN EUROPE by D. Turnock. 14 × 22 cm, xii and 345 pages. Routledge: London 1989 (ISBN 0 415 00469 1) $A105.00 (hard), distributed by the Law Book Co.

A HISTORY OF THE PACIFIC ISLANDS by I. C. Campbell. 14 × 21 cm, 239 pages. University of Queensland Press: St Lucia 1990 (ISBN 0 7022 2291 7) $A34.95 (soft).

THE CORPORATE FIRM IN A CHANGING WORLD ECONOMY: Case Studies in the Geography of Enterprise edited by M. de Smidt and E. Wev‐er. 14 × 23 cm, xiv and 247 pages. Routledge: London 1990 (ISBN 0 415 03497 3) $A105.00 (hard).

THE CAPITALIST CITY: Global Restructuring and Community Politics by M. P. Smith and J. R. Feagin. 15 × 23 cm, 393 pages. Basil Black‐well: Oxford 1988 (ISBN 0 631 15182 6) £35 (hard).

CONFLICT AND CHANGE IN THE COUNTRYSIDE: Rural Society, Economy and Planning in the Developed World by G. M. Robinson. 15 × 23 cm, xxvi and 482 pages. Belhaven Press: London 1990 (ISBN 1 85293 043 8) £40.00 (hard); (ISBN 1 85293 044 6) £14.95 (soft).

ENVIRONMENTAL SCIENCE (Collins Reference Dictionary) by G. Jones, A. Robertson, J. Forbes and G. Hollier. 13 × 20 cm, vi and 473 pages. Collins: London 1990 (ISBN 0 00 434348 4) £5.95 (soft).

THE HUMAN IMPACT ON THE NATURAL ENVIRONMENT (Third Edition) by A. Goudie. 17 × 24 cm, xi and 388 pages. Blackwell: Oxford 1990 (ISBN 0 631 16164 3) $A39.95 (soft).

PATTERNS OF LIFE: Biogeography of a Changing World by H. W. Mielke. 19 × 24 cm, xiv and 370 pages. Unwin Hyman: London 1989 (ISBN 0 04 574032 1).     

Investigating the propagation mechanism of unmodelled systematic errors on coordinate time series estimated using least squares

The propagation of unmodelled systematic errors into coordinate time series computed using least squares is investigated, to improve the understanding of unexplained signals and apparent noise in geodetic (especially GPS) coordinate time series. Such coordinate time series are invariably based on a functional model linearised using only zero and first-order terms of a (Taylor) series expansion about the approximate coordinates of the unknown point. The effect of such truncation errors is investigated through the derivation of a generalised systematic error model for the simple case of range observations from a single known reference point to a point which is assumed to be at rest by the least squares model but is in fact in motion. The systematic error function for a one pseudo-satellite two-dimensional case, designed to be as simple but as analogous to GPS positioning as possible, is quantified. It is shown that the combination of a moving reference point and unmodelled periodic displacement at the unknown point of interest, due to ocean tide loading, for example, results in an output coordinate time series containing many periodic terms when only zero and first-order expansion terms are used in the linearisation of the functional model. The amplitude, phase and period of these terms is dependent on the input amplitude, the locations of the unknown point and reference point, and the period of the reference point's motion. The dominant output signals that arise due to truncation errors match those found in coordinate time series obtained from both simulated data and real three-dimensional GPS data.     

Porites corals as recorders of mining and environmental impacts: Misima Island, Papua New Guinea

In 1989 open-cut gold mining commenced on Misima Island in Papua New Guinea (PNG). Open-cut mining by its nature causes a significant increase in sedimentation via the exposure of soils to the erosive forces of rain and runoff. This increased sedimentation affected the nearby fringing coral reef to varying degrees, ranging from coral mortality (smothering) to relatively minor short-term impacts. The sediment associated with the mining operation consists of weathered quartz feldspar, greenstone, and schist. These rocks have distinct chemical characteristics (rare earth element patterns and high abundances of manganese, zinc, and lead) and are entering the near-shore environment in considerably higher than normal concentrations. Using laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS), we analyzed eight colonies (two from high sedimentation, two transitional, two minor, and two unaffected control sites) for Y, La, Ce, Mn, Zn, and Pb. All sites show low steady background levels prior to the commencement of mining in 1988. Subsequently, all sites apart from the control show dramatic increases of Y, La, and Ce associated with the increased sedimentation as well as rapid decreases following the cessation of mining. The elements Zn and Pb exhibit a different behavior, increasing in concentration after 1989 when ore processing began and one year after initial mining operations. Elevated levels of Zn and Pb in corals has continued well after the cessation of mining, indicating ongoing transport into the reef of these metals via sulfate-rich waters. Rare earth element (REE) abundance patterns measured in two corals show significant differences compared to Coral Sea seawater. The corals display enrichments in the light and middle REEs while the heavy REEs are depleted relative to the seawater pattern. This suggests that the nearshore seawater REE pattern is dominated by island sedimentation. Trace element abundances of Misima Island corals clearly record the dramatic changes in the environmental conditions at this site and provide a basis for identifying anthropogenic influences on corals reefs.