Biochemical alterations in juvenile carp (Cyprinus carpio) exposed to zinc: glutathione reductase as a target

The aim of this study was to investigate biochemical changes in juvenile carp (Cyprinus carpio) exposed to zinc chloride (10, 30 and 100 microM) for a period of 48 h. Zinc exposure caused a concentration-dependent reduction in glutathione reductase (GR) activity in gills, liver and brain. Gill glutathione S-transferase (GST) was reduced when animals were exposed to the highest concentration of 100 microM zinc. The phosphorylation of p38(MAPK) increased in the brain of fish exposed to zinc 100 microM, while phosphorylation of the extracellular signal-regulated protein kinase 1/2 (ERK1/2) and c-Jun N-terminal protein kinase 1/2 (JNK1/2) remained unchanged. Expression of proteins HSP60 and HSP70 were not affected by zinc exposure. Considering the significant concentration-dependent inhibition of GR in all tissues analyzed, this enzyme could be a potential biomarker of exposure to zinc, which has to be confirmed.     

Low calcification rates and calcium carbonate production in Porites panamensis at its northernmost geographic distribution

Porites panamensis is a hermatypic coral present in the eastern Pacific Ocean. Skeletal growth parameters have been reported, but studies of the relationship between annual calcification rates and environmental controls are scarce. In this study, we investigated three aspects of the annual calcification rates of P. panamensis: growth parameters among three P. panamensis populations; the sea surface temperature as a calcification rate control spanning a latitudinal gradient; and calcium carbonate production among three sites. Growth parameters varied among the sites due to the colony growth form. Massive colonies in the north showed a higher calcification rate than encrusting colonies in the south (mean: 1.22–0.49 g CaCO₃ · cm^?2 · yr^?1), where variations in calcification rates were related to growth rate (0.91–0.38 cm · yr^?1) rather than to skeletal density differences (overall mean ± SD, 1.31 ± 0.04 g CaCO₃ · cm^?3). Our results showed a positive linear relationship between annual calcification rates and sea surface temperatures within these P. panamensis populations. Differences were related to distinct oceanographic environments (within and at the entrance of the Gulf of California) with different sea surface temperature regimes and other chemical properties. Different populations calcified under different environmental conditions. Calcium carbonate production was dependent upon the calcification rate and coral cover and so carbonate production was higher in the north (coral cover 12%) than in the south (coral cover 3.5). Thus, the studied sites showed low calcium carbonate production (0.25–0.43 kg CaCO₃ · m^?2 · yr^?1). Our results showed reduced calcification rates, regional temperature regime control over calcification rates, different growth forms, low coral cover and low calcium carbonate production rates in P. panamensis.     

Early-Morning Flow Transition in a Valley in Low-Mountain Terrain Under Clear-Sky Conditions

We investigate the evolution of the early-morning boundary layer in a low-mountain valley in south-western Germany during COPS (convective and orographically induced precipitation study) in summer 2007. The term low-mountain refers to a mountainous region with a relief of gentle slopes and with an absolute altitude that remains under a specified height (usually 1,500 m a.s.l.). A subset of 23 fair weather days from the campaign was selected to study the transition of the boundary-layer flow in the early morning. The typical valley atmosphere in the morning hours was characterized by a stable temperature stratification and a pronounced valley wind system. During the reversal period—called the low wind period—of the valley wind system (duration of 1–2 h), the horizontal flow was very weak and the conditions for free convection were fulfilled close to the ground. Ground-based sodar observations of the vertical wind show enhanced values of upward motion, and the corresponding statistical properties differ from those observed under windless convective conditions over flat terrain. Large-eddy simulations of the boundary-layer transition in the valley were conducted, and statistical properties of the simulated flow agree with the observed quantities. Spatially coherent turbulence structures are present in the temporal as well as in the ensemble mean analysis. Thus, the complex orography induces coherent convective structures at predictable, specific locations during the early-morning low wind situations. These coherent updrafts, found in both the sodar observations and the simulation, lead to a flux counter to the gradient of the stably stratified valley atmosphere and reach up to the heights of the surrounding ridges. Furthermore, the energy balance in the surface layer during the low wind periods is closed. However, it becomes unclosed after the onset of the valley wind. The partition into the sensible and the latent heat fluxes indicates that missing flux components of sensible heat are the main reason for the unclosed energy balance in the considered situations. This result supports previously published investigations on the energy balance closure.     

Modelling river water temperature using deterministic,empirical, and hybrid formulations in a Mediterranean stream

River water temperature is a common target of water quality models at the watershed scale, owing to its principal role in shaping biogeochemical processes and in stream ecology. Usually, models include physically‐based, deterministic formulations to calculate water temperatures from detailed meteorological information, which usually comes from meteorological stations located far from the river reaches. However, alternative empirical approaches have been proposed, that usually depend on air temperature as master variable. This study explored the performance of a semidistributed water quality application modelling river water temperature in a Mediterranean watershed, using three different approaches. First, a deterministic approach was used accounting for the different heat exchange components usually considered in water temperature models. Second, an empirical approximation was applied using the equilibrium temperature concept, assuming a linear relationship with air temperature. And third, a hybrid approach was constructed, in which the temperature equilibrium concept and the deterministic approach were combined. Results showed that the hybrid approach gave the best results, followed by the empirical approximation. The deterministic formulation gave the worst results. The hybrid approach not only fitted daily river water temperatures, but also adequately modelled the daily temperature range (maximum–minimum daily temperature). Other river water features directly dependent on water temperature, such as river intrusion depth in lentic systems (i.e. the depth at which the river inflow plunges to equilibrate density differences with lake water), were also correctly modelled even at hourly time steps. However, results for the different heat fluxes between river and atmosphere were very unrealistic. Although direct evidence of discrepancies between meteorological drivers measured at the meteorological stations and the actual river microclimate was not found, the use of models including empirical or hybrid formulations depending mainly on air temperature is recommended if only meteorological data from locations far from the river reaches are available. Copyright © 2008 John Wiley & Sons, Ltd.     

Towards a comprehensive approach to parameter estimation in land surface parameterization schemes

In climate models, the land–atmosphere interactions are described numerically by land surface parameterization (LSP) schemes. The continuing improvement in realism in these schemes comes at the expense of the need to specify a large number of parameters that are either directly measured or estimated. Also, an emerging problem is whether the relationships used in LSPs are universal and globally applicable. One plausible approach to evaluate this is to first minimize uncertainty in model parameters by calibration. In this paper, we conduct a comprehensive analysis of some model diagnostics using a slightly modified version of the Simple Biosphere 3 model for a variety of biomes located mainly in the Amazon. First, the degree of influence of each individual parameter in simulating surface fluxes is identified. Next, we estimate parameters using a multi‐operator genetic algorithm applied in a multi‐objective context and evaluate simulations of energy and carbon fluxes against observations. Compared with the default parameter sets, these parameter estimates improve the partitioning of energy fluxes in forest and cropland sites and provide better simulations of daytime increases in assimilation of net carbon during the dry season at forest sites. Finally, a detailed assessment of the parameter estimation problem was performed by accounting for the decomposition of the mean squared error to the total model uncertainty. Analysis of the total prediction uncertainty reveals that the parameter adjustments significantly improve reproduction of the mean and variability of the flux time series at all sites and generally remove seasonality of the errors but do not improve dynamical properties. Our results demonstrate that error decomposition provides a meaningful and intuitive way to understand differences in model performance. To make further advancements in the knowledge of these models, we encourage the LSP community to adopt similar approaches in the future. Copyright © 2012 John Wiley & Sons, Ltd.     

Coastal vulnerability in barrier islands: The high risk areas of the Ria Formosa (Portugal) system

Coastal vulnerability in barrier island systems is extremely high. The barrier island shoreline is exposed to many threats, such as storm erosion, reductions in sediment longshore drift and sea level rise. Many of these threats to coastal areas, such as Ria Formosa, are likely to increase in the near future. The main objectives of the present study are to identify the areas in the system that are at most risk by assessing the evolution of the Ria Formosa barrier island system since the 1940s, and determine which interventions would be necessary to protect these areas.The coastal vulnerability of the system was assessed based on current literature, data available from official institutions, and aerial and terrestrial in situ examination. The results obtained for the evolution of the Ria Formosa coastal system reveal that there are several vulnerable areas that have very dynamic processes, such as extremely high evolution rates of islands and inlets. Human actions that affect the whole system, namely the construction of many physical structures, are the main cause of the instability. Moreover, as several stakeholders are involved, efficient management of the coastal system is imperative. Extensive and careful interventions are urgently needed to avoid irreversible negative impacts on the barrier island system. Three types of techniques could be adopted to deal with the threats to barrier islands: hard stabilization, soft techniques, and non-structural alternatives. However, using hard techniques has many negative effects compared to soft techniques, and as a result it is necessary to remove existing structures from the areas at most risk.     

Clues to Substellar Formation: Rotation and the Low-Mass End of the Initial Mass Function

We have monitored S Ori 45, a young, low-mass (20 M _j up) brown dwarf of the σ Orionis cluster (～3 Myr, 352 pc), using optical and near-infrared filters. S Ori 45 (spectral type M8.5) is found to be multi-periodic with a dominant modulation at 2.5–3.5 h, and a short modulation at about 46 min. We ascribe the longer of these modulations to a rotation period. After comparing these results with observations of more massive cluster brown dwarfs and field brown dwarfs, we conclude that substellar objects present rotational and angular momentum evolution. We have also obtained intermediate-resolution near-infrared spectroscopy of S Ori 70, which is a T-class, free-floating planetary candidate member in the σ Orionis cluster. Its observed spectrum has been compared to data of field brown dwarfs of similar types and to theoretical spectra computed for different surface temperatures and gravities. We conclude that S Ori 70 has a significantly cool, low-gravity atmosphere. This supports the young age of this object and its membership in the cluster. From state-of-the-art evolutionary models, the mass of S Ori 70 is estimated at 3 times the Jovian mass (⁺⁵ _?2 M _j up), challenging current stellar/substellar formation models. S Ori 70 remains the lowest mass object so far identified in any open cluster.