On the water and energy cycles in the Tropics

The water and energy cycles are major elements of the Earth climate. These cycles are especially active in the intertropical belt where satellites provide the most suitable observational platform. The history of Earth observations of the water cycle and of the radiation budget viewed from space reveals that the fundamental questions from the early times are still relevant for today's research. The last 2 decades have seen a number of milestones regarding the documentation of rainfall, mesoscale convective systems (MCS), water vapour and radiation at the top of the atmosphere (TOA). Beyond dedicated missions that provided enhanced characterizations of some elements of the atmospheric water cycle and field campaigns that allowed the gathering of validation data, the advent of the long record of meteorological satellites lead to new questioning on the homogenisation of the data time series, etc. The use of this record to document the tropical climate brought new results of the distribution of humidity and reinforced the understanding of some robust features of the African monsoon. Challenges for the immediate future concerns the deepening of the understanding of the role of cloud systems in the monsoon circulation, the downscaling of the documentation of the water and energy cycle at the scale of these cloud systems, the research of better adequation between the users and the satellite estimate of rainfall and finally a much needed methodological effort to build exploitable time series for the estimation of climatic trends in the water and energy cycle in the Tropics. The required observations to address these challenges are rapidly presented with emphasis on the upcoming Megha-Tropiques (MT) mission.     

Similarity in microbial amino acid uptake in surface waters of the North and South Atlantic (sub-)tropical gyres

The Earth’s most extensive biomes – the oceanic subtropical gyres – are considered to be expanding with current surface ocean warming. Although it is well established that microbial communities control gyre biogeochemistry, comparisons of their metabolic activities between gyres are limited. In order to estimate metabolic activities including production of microbial communities, the uptake rates of amino acids leucine, methionine and tyrosine at ambient concentrations were estimated in surface waters of the Atlantic Ocean using radioisotopically labelled tracers. Data were acquired during six research cruises covering main oceanic provinces herein termed: North and South Atlantic Gyres, Bermuda Atlantic Time-series Study site (BATS), Equatorial region, and Mauritanian Upwelling (off Cape Blanc). Data were divided between provinces, the extents of which were identified by ocean colour data, in order to achieve provincial mean uptake rates. Leucine and methionine uptake rates did not differ between sampling periods, and were comparable between the North and South subtropical gyres. Furthermore, variation in uptake rates measured throughout the two oligotrophic gyres, where sampling covered ∼4 × 10⁶ km², was considerably lower than that measured within the Mauritanian Upwelling and Equatorial regions, and even at the BATS site. Tyrosine was generally the slowest of the amino acids to be taken up, however, it was assimilated faster than methionine within the Mauritanian Upwelling region. Thus, we propose that one value for leucine (12.6 ± 3.2 pmol L⁻¹ h⁻¹) and methionine (10.0 ± 3.3 pmol L⁻¹ h⁻¹) uptake could be applied to the oligotrophic subtropical gyres of the Atlantic Ocean. However, with the significantly lower uptake rates observed at the BATS site, we would not advise extrapolation to the Sargasso Sea.     

The use of cotton blue stain to improve the efficiency of picking and identifying chironomid head capsules

Cotton blue was added to sediment samples at least 2 h before chironomid head capsules were picked under a binocular microscope and mounted on slides for identification. The use of stain greatly increased the visibility of chironomid head capsules during picking and enhanced the contrast of various parts of the head capsules (pores, ventromental plates, striations on ventromental plates), which could aid identification. In the seven samples studied, there was no significant difference between the percentages of taxa found in stained and unstained samples. The number of taxa were also similar in stained and unstained samples. This method allowed samples to be picked faster.     

The influence of sunspot canopies on magnetic inclination measurements in solar plages

Sunspots are known to have large, low-lying magnetic canopies, i.e. horizontal magnetic fields overlying a field-free medium, that cover substantial fractions of active region plage. In this paper we consider the influence of such canopies on the inclination of plage magnetic fields. We find that for observations in spectral lines like 5250.2Å the neglect of a sunspot canopy when determining magnetic inclination angles of plage fields can introduce errors exceeding 5–10°. This is particularly true if the observations do not have high spatial resolution. Thus this effect may explain some of the measurements of substantially inclined fields in solar plages. Furthermore we find that the Fe I 15648 Å line is far superior in giving correct flux-tube inclinations in the presence of a sunspot magnetic canopy. Finally, the inversion of full Stokes profiles is shown to produce more reliable results than results obtained by considering only ratios of individual Stokes profile parameters.     

The Kwakshua Watersheds Observatory,central coast of British Columbia,Canada

The Kwakshua Watersheds Observatory (KWO) is an integrative watersheds observatory on the coastal margin of a rain-dominated bog-forest landscape in British Columbia (BC), Canada. Established in 2013, the goal of the KWO is to understand and model the flux of terrestrial materials from land to sea – the origins, pathways, processes and ecosystem consequences – in the context of long-term environmental change. The KWO consists of seven gauged watersheds and a network of observation sites spanning from land to sea and along drainage gradients within catchments. Time-series datasets include year-round measurements of weather, soil hydrology, streamflow, aquatic biogeochemistry, microbial ecology and nearshore oceanographic conditions. Sensor measurements are recorded every 5 min and water samples are collected approximately monthly. Additional observations are made during high-flow conditions. We used remote sensing to map watershed terrain, drainage networks, soils and terrestrial ecosystems. The watersheds range in size from 3.2 to 12.8 km², with varying catchment characteristics that influence hydrological and biogeochemical responses. Despite local variation, the overall study area is a global hotspot for yields of dissolved organic carbon, dissolved organic nitrogen and dissolved iron at the coastal margin. This observatory helps fill an important gap in the global network of observatories, in terms of spatial location (central coast of BC), climate (temperate oceanic), hydrology (very high runoff, pluvial regime), geology (igneous intrusive, glacially scoured), vegetation (bog rainforest) and soils (large stores of organic carbon).     

Metasomatism and graphite formation at a lithological interface in Malaspina (Alpine Corsica, France)

Multiple pieces of geologic evidence suggest that interfaces between contrasted lithologies exert a strong control on the fate of volatiles in subduction zones. Here we present results from a contact between serpentinites and sediments, located in Corsica and metamorphosed in the blueschist facies during the alpine orogeny. It was shown previously that carbonates in the sediments have been reduced to graphitic carbonaceous material within a 5–10-cm-thick reaction zone at the contact with serpentinites. In an effort to investigate the mechanisms governing this unusual process, bulk rock geochemical analyses incorporating a statistical analysis of compositional data are presented. Observations show that the fate of C was decoupled from that of other elements such as O, H, and large-ion lithophile elements—e.g. K, Sr, Ba...,As—that were extensively leached from the reaction zone. Notably, Na is strongly enriched in the reaction zone and structurally linked to pectolite. Reducing conditions, manifested by the depletion of O in the reaction zone compared to the bulk metasediment, were likely maintained by the presence of Fe(II) in the serpentinite. Moreover, thermodynamic calculations show that the low solubility of carbon in COH fluids at high-pressure and low-temperature conditions was the main driver for graphite precipitation synchronously with carbonate destabilization. This may have been kinetically favored by the presence of already existing graphitized carbonaceous material and phengite in the metasediment. Limited lateral flow might have contributed as well to the geochemical and petrological patterns observed in these rocks.     

Assessing chironomid head capsule concentrations in sediment using exotic markers

All the chironomid head capsules in a sediment sample are normally extracted to determine the concentration of chironomids. This method may be tedious since a sample may contain hundreds of head capsules. We have tested a method to estimate the concentration of chironomids in sub-samples and assessed the potential taxonomic bias generated when only a part of each sediment sample is sorted. To allow calculation of concentrations, a known quantity of exotic markers (microspheres with diameter 149–350 μm) was added to the sample. The number of head capsules in the total sample was estimated according to the ratio between the retrieved numbers of microspheres to head capsules in the sub-sample. According to our results, the chironomid concentrations estimated from sub-samples were statistically similar to the concentrations obtained by processing the full sample. Also, a sub-sample containing at least 75 head capsules was likely to have similar taxa abundances and taxa richness as the full sediment sample. These results indicate that exotic markers may be added to chironomid samples for representative concentration estimation. The method may potentially be used for other biological groups than chironomids.