Testing potential bias in marine plankton respiration rates by dark bottle incubations in the NW Iberian shelf: incubation time and bottle volume

The accurate determination of the balance between plankton production and respiration in the ocean is important for C budgets and global change predictions. Disagreements on the measurement of such a balance at different scales (from microbiological to biogeochemical) have produced a controversy over the trophic status of the ocean. This is especially striking in the oligotrophic open ocean, where plankton community O₂ consumption rates in 24 h incubations have frequently produced a net heterotrophic balance, but similar difficulties emerge in coastal systems. These results have been criticised due to the possibility that the standard 24 h in vitro incubations are biased because of the long incubation time needed and the so-called “bottle effect”.To study the influence of the incubation time and bottle volume on the measurement of plankton net metabolism, we carried out several time series experiments in the NW Iberian coastal system. Here we present measurements of plankton community respiration rates concurrently obtained through (1) standard in vitro changes in dissolved oxygen concentration after different incubation times ranging from 2 to 48 h, and with bottle volumes of 50, 125 and 570 mL, and (2) the decrease in the oxygen concentration measured every 20 s with oxygen microsensors, during 48 h. Our results refute the contention that 24 h dark 125 mL bottle incubations are systematically biased, and highlight the validity of oxygen microsensors to study the dynamics of natural marine plankton respiration.     

Grain boundary and volume diffusion experiments in yttrium aluminium garnet bicrystals at 1,723 K: a miniaturized study

Yb-Y inter-diffusion along a single grain boundary of a synthetic yttrium aluminium garnet (YAG) bicrystal has been studied using analytical transmission electron microscopy (ATEM). To investigate the diffusion, a thin-film containing Yb as the diffusant was deposited perpendicular to the bicrystal grain boundary by pulsed laser deposition (PLD). Structural properties and their change with time in both the diffusant source and the grain boundary are reported. The diffusion profiles are incorporated in a numerical diffusion model, which is applied to determine the grain boundary diffusion coefficient, D _gb , at 1.723 K it is equal to 3 × 10⁻¹⁵ m²/s. We find that grain boundary diffusion is 4.85 orders of magnitude faster than volume diffusion, which was determined from the same diffusion experiment. This result is discussed in the context of special versus general grain boundaries. Finally, we successfully tested the capability of synchrotron-based nano-X-ray fluorescence analysis to map micro-chemical patterns in two dimensions with sub-micrometre resolution.     

Granitic magmatism,basement ages,and provenance indicators in the Malay Peninsula: Insights from detrital zircon U–Pb and Hf-isotope data

The Malay Peninsula lies on two continental blocks, Sibumasu and East Malaya, which are intruded by granitoids in two provinces: the Main Range and Eastern. Previous models propose that Permian–Triassic granitoids are subduction-related and syn-to post-collisional. We present 752 U–Pb analyses that were carried out on zircons from river sands in the Malay Peninsula; of these, 243 grains were selected for Hf-isotope analyses. Our data suggest a more complex Sibumasu–East Malaya collision history. ¹⁷⁶Hf/¹⁷⁷Hf_i ratios reveal that Permian–Triassic zircons were sourced from three magmatic suites: (a) Permian crustally-derived granitoids, (b) Early-Middle Triassic granitoids with mixed mantle–crust sources, and (c) Late Triassic crustally-derived granitoids. This suggests three Permian–Triassic episodes of magmatism in the Malay Peninsula, two of which occurred in the Eastern Province. Although the exact timing of the Sibumasu–East Malaya collision remains unresolved, current data suggest that it occurred before the Late Triassic, probably in Late Permian–Early Triassic. Our data also indicate that Sibumasu and East Malaya basements are chronologically heterogeneous, but predominantly of Proterozoic age. Some basement may be Neoarchaean but there is no evidence for basement older than 2.8 Ga. Finally, we show that Hf-isotope signatures of Triassic zircons can be used as provenance indicators.     

Actinian dominated intertidal mudflats: A new case of an extraordinary rare phenomenon from Southern Chile

Generally, estuarine intertidal mudflats constitute important nurseries for fish and foraging grounds for coastal birds by providing a plenitude of mollusks, worms, and crustaceans as prey, which in turn mostly feed on suspended and benthic microalgae, bacteria, and detritus. Despite the high productivity of such habitats, pronounced variability in both salinity and temperature results typically in low diversity. The only sea anemone reported from estuarine mud is the edwardsiid Nematostella vectensis Stephenson, 1935. It occurs widely in the northern hemisphere, and occasionally in extremely high density. Here we document another sea anemone from estuarine mud and muddy sand found in Southern Chile which has similar ecological attributes. Taxonomic confusion has impeded the reporting on this small but prominent member in a macrozoobenthic assemblage, the brooding Anthopleura hermaphroditica (Carlgren, 1899; Anthozoa: Actiniidae). It differs from N. vectensis by the presence of symbiotic algae. Average density under poly- to euhaline conditions in mud and muddy sand at around mid tide level was about 3 actinians per cm². An average abundance of 11,000 m^? 2, a biovolume of 487 cm³ m^? 2, and a biomass of 35.5 g dry organic weight m^? 2 were found in mud and muddy sand in two surveys 20 years apart. The mean fishing area of fully expanded individuals covers 42 ± 25 mm², corresponding to a circular area with a diameter of 7.3 ± 5.7 mm. Preliminary experiments indicate that associated benthos may be relegated to life below surface by the net of tentacles above the sediment. As no predators on A. hermaphroditica could be found on the mudflat, the success of this mixotrophic sea anemone may entail a trophic dead end.     

Recent geomorphological changes of the middle and lower Calore River (Campania, Southern Italy)

The geomorphological changes experienced by the middle and lower Calore River (Southern Italy) between 1957 and 1998 were investigated. Data derived from field surveys and interpretation of topographic maps and aerial photos were introduced into a geographic information system (GIS) and processed. The results showed that the Calore River underwent a mean narrowing of 66 %, with a peak of 86 %. The channel length increased by approximately 75 m and the sinuosity from 1.311 to 1.314. The extension of fluvial bars reduced by more than 83 %, while their number increased from 151 to 381. Field evidence of riverbed lowering, such as river terraces formed in the considered time span and exhumation of foundations of bridges and flood-walls, were also constantly detected. Due to these channel adjustments, the Calore River morphology changed from transitional to single-thread. These results were coherent with those reported in the pre-existing literature about channel adjustments experienced by many rivers during the twentieth century. They all were explainable with a reduction of the bedload transport; this latter, in turn, is completely in accordance with the environmental changes that affected the Calore River system in the considered period (i.e., damming and/or channelization of the main tributaries, reduction of liquid discharge due to water withdrawals and sediment mining from the riverbed).     

Secondary phase validation—Phase classification by polarization

A long-standing problem in operational seismology is that of reliable focal depth estimation. Standard analyst practice is to pick and identify a ‘phase’ in the P-coda. This picking will always produce a depth estimate but without any validation it cannot be trusted. In this article we ‘hunt’ for standard depth phases like pP, sP and/or PmP but unlike the analyst we use Bayes statistics for classifying the probability that polarization characteristics of pickings belong to one of the mentioned depth phases given preliminary epicenter information. In this regard we describe a general-purpose PC implementation of the Bayesian methodology that can deal with complex nonlinear models in a flexible way. The models are represented by a data-flow diagram that may be manipulated by the analyst through a graphical-programming environment. An analytic signal representation is used with the imaginary part being the Hilbert transform of the signal itself. The pickings are in terms of a plot of posterior probabilities as a function of time for pP, Sp or PmP being within the presumed azimuth and incident angle sectors for given preliminary epicenter locations. We have tested this novel focal depth estimation procedure on explosion and earthquake recordings from Cossack Ranger II stations in Karelia, NW Russia, and with encouraging results. For example, pickings deviating more than 5° off ‘true’ azimuth are rejected while Pn-incident angle estimate exhibit considerable scatter. A comprehensive test of our approach is not quite easy as recordings from so-called Ground Truth events are elusive.     

Contributions of terrestrial and GRACE data to the study of the secular geoid changes in North America

This paper tests and discusses different statistical methods for modelling secular rates of change of the geoid in North America. In particular, we use the method of principal component/empirical orthogonal functions (PC/EOF) analysis to model the geoid rates from Gravity Recovery and Climate Experiment (GRACE) satellite data. As demonstrated, the PC/EOF analysis is useful for studying the contributions from different signals (mainly residual hydrology signals and leakage effects) to the GRACE-derived geoid rates. The PC/EOF analysis leads to smaller geoid rates compared to the conventional least-squares fitting of a trend and annual and semi-annual cycles to the time series of the spherical harmonic coefficients. This is because we filter out particular spatiotemporal modes of the regional geoid changes.We apply the method of least-squares collocation with parameters to combine terrestrial data (GPS vertical velocities from the Canadian Base Network and terrestrial gravity rates from the Canadian Gravity Standardization Net) with the GRACE-derived vertical motion to obtain again the geoid rates. The combined model has a peak geoid rate of 1.4 mm/year in the southeastern area of Hudson Bay contrary to the GRACE-derived geoid rates that show a large peak of 1.6–1.7 mm/year west of Hudson Bay. We demonstrate that the terrestrial data, which have a longer time span than the GRACE data, are important for constraining the GRACE-derived secular signal in the areas that are well sampled by the data.     

The Afragola settlement near Vesuvius,Italy: The destruction and abandonment of a Bronze Age village revealed by archaeology,volcanology and rock-magnetism

Public works in progress in the Campanian plain north of Somma-Vesuvius recently encountered the remains of a prehistoric settlement close to the town of Afragola. Rescue excavations brought to light a Bronze Age village partially destroyed and buried by pyroclastic density currents (PDCs) of the Vesuvian Pomici di Avellino eruption (3.8 ¹⁴C ka BP) and subsequently sealed by alluvial deposits. Volcanological and rock-magnetic investigations supplemented the excavations.Careful comparison between volcanological and archaeological stratigraphies led to an understanding of the timing of the damage the buildings suffered when they were struck by a series of PDCs. The first engulfed the village, located some 14 km to the north of the inferred vent, and penetrated into the dwellings without causing major damage. The buildings were able to withstand the weak dynamic pressure of the currents and deviate their path, as shown by the magnetic fabric analyses. Some later collapsed under the load of the deposits piled up by successive currents. Stepwise demagnetization of the thermal remanent magnetization (TRM) carried by potsherds embedded in the deposits yields deposition temperatures in the order of 260–320 °C, fully consistent with those derived from pottery and lithic fragments from other distal and proximal sites. The fairly uniform temperature of the deposits is here ascribed to the lack of pervasive air entrainment into the currents. This, in turn, resulted from the lack of major topographical obstacles along the flat plain.The coupling of structural damage and sedimentological analyses indicates that the currents were not destructive in the Afragola area, but TRM data indicate they were still hot enough to cause death or severe injury to humans and animals. The successful escape of the entire population is apparent from the lack of human remains and from thousands of human footprints on the surface of the deposits left by the first PDCs. People were thus able to walk barefoot across the already emplaced deposits and escape the subsequent PDCs. The rapid cooling of the deposits was probably due to both their thinness and heat dissipation due to condensation of water vapour released in the mixture by magma–water interaction.     

Effects of long-term medieval agriculture on soil properties: A case study from the Kislovodsk basin,Northern Caucasus,Russia

The chemical properties and biological activities of soils were studied in the vicinity of the medieval settlement Podkumskoe-3 in the Kislovodsk basin (Northern Caucasus, Russia). Between the 5th and 8th centuries this area was ploughed regularly, but it was then abandoned up to the present day. It has been established that past human activity leads to soil undergoing significant transformations in terms of microbial communities and enzyme activity, and that such changes are maintained over long periods. Long-term manuring in the middle of the first millennium AD led to an increase in organic carbon content and the accumulation of nitrate nitrogen. Soils of ancient abandoned fields are associated with increases in microbial biomass, number of saprotrophic bacteria, urease activity, and fungal mycelium biomass. The observed changes in the microbiological and biochemical properties of soil were conditioned by secondary anthropogenically induced succession after the abandonment of arable lands.     

The characteristic pattern of multiple colored layers in coastal stratified lakes in the process of separation from the White Sea

An unusual feature of the saline stratified lakes that were formed due to ongoing postglacial uplift on the White Sea coast is the presence of several differently colored thin layers in the zone with sharp gradients. Colored layers in five lakes at various stages of separation from the sea were investigated using optical microscopy, spectrophotometry, spectrofluorimetry, and photobiology. The upper greenish colored layer located in the aerobic strata of all lakes near the compensation depth of 1% light penetration contains green algae. In the chemocline, another layer, brightly green, red or pink, is dominated by mixotrophic flagellates. Despite the very low light intensities and the presence of H 2 S, active photosynthesis by these algae appears to be occurring, as indicated by high values of the maximum quantum yield of primary photochemistry, electron transport activity, photosynthetic activity of photosystem II, the fraction of active centers, and low values of heat dissipation. In the reduced zone of the chemocline, a dense green or brown suspension of anoxygenic phototrophs(green sulfur bacteria) is located.