Toward a generic method for studying water renewal, with application to the epilimnion of Lake Tanganyika

We present a method, based on the concept of age and residence time, to study the water renewal in a semi-enclosed domain. We split the water of this domain into different water types. The initial water is the water initially present in the semi-enclosed domain. The renewing water is defined as the water entering the domain of interest. Several renewing water types may be considered depending on their origin. We present the equations for computing the age and the residence time of a certain water type. These timescales are of use to understand the rate at which the water renewal takes place. Computing these timescales can be achieved at an acceptable extra computer cost.The above-mentioned method is applied to study the renewal of epilimnion (i.e. the surface layer) water in Lake Tanganyika. We have built a finite element reduced-gravity model modified to take into account the water exchange between the epilimnion and the hypolimnion (i.e. the bottom layer), the water supply from precipitation and incoming rivers, and the water loss from evaporation and the only outgoing river. With our water renewal diagnoses, we show that the only significant process in the renewal of epilimnion water in Lake Tanganyika is the water exchange between the epilimnion and the hypolimnion, other phenomena being negligible.     

Primary production in the eastern tropical Pacific: A review

The eastern tropical Pacific includes 28 million km² of ocean between 23.5°N and S and Central/South America and 140°W, and contains the eastern and equatorial branches of the north and South Pacific subtropical gyres plus two equatorial and two coastal countercurrents. Spatial patterns of primary production are in general determined by supply of macronutrients (nitrate, phosphate) from below the thermocline. Where the thermocline is shallow and intersects the lighted euphotic zone, biological production is enhanced. In the eastern tropical Pacific thermocline depth is controlled by three interrelated processes: a basin-scale east/west thermocline tilt, a basin-scale thermocline shoaling at the gyre margins, and local wind-driven upwelling. These processes regulate supply of nutrient-rich subsurface waters to the euphotic zone, and on their basis we have divided the eastern tropical Pacific into seven main regions. Primary production and its physical and chemical controls are described for each.Enhanced rates of macronutrient supply maintains levels of primary production in the eastern tropical Pacific above those of the oligotrophic subtropical gyres to the north and south. On the other hand lack of the micronutrient iron limits phytoplankton growth (and nitrogen fixation) over large portions of the open-ocean eastern tropical Pacific, depressing rates of primary production and resulting in the so-called high nitrate-low chlorophyll condition. Very high rates of primary production can occur in those coastal areas where both macronutrients and iron are supplied in abundance to surface waters. In these eutrophic coastal areas large phytoplankton cells dominate; conversely, in the open-ocean small cells are dominant. In a ‘shadow zone’ between the subtropical gyres with limited subsurface ventilation, enough production sinks and decays to produce anoxic and denitrified waters which spread beneath very large parts of the eastern tropical Pacific.Seasonal cycles are weak over much of the open-ocean eastern tropical Pacific, although several eutrophic coastal areas do exhibit substantial seasonality. The ENSO fluctuation, however, is an exceedingly important source of interannual variability in this region. El Niño in general results in a depressed thermocline and thus reduced rates of macronutrient supply and primary production. The multi-decadal PDO is likely also an important source of variability, with the ‘El Viejo’ phase of the PDO resulting in warmer and lower nutrient and productivity conditions similar to El Niño.On average the eastern tropical Pacific is moderately productive and, relative to Pacific and global means, its productivity and area are roughly equivalent. For example, it occupies about 18% of the Pacific Ocean by area and accounts for 22–23% of its productivity. Similarly, it occupies about 9% of the global ocean and accounts for 10% of its productivity. While representative, these average values obscure very substantial spatial and temporal variability that characterizes the dynamics of this tropical ocean.     

Design of a 3D Chirp Sub-bottom Imaging System

Chirp sub-bottom profilers are marine acoustic devices that use a known and repeatable source signature (1–24 kHz) to produce decimetre vertical resolution cross-sections of the sub-seabed. Here the design and development of the first true 3D Chirp system is described. When developing the design, critical factors that had to be considered included spatial aliasing, and precise positioning of sources and receivers. Full 3D numerical modelling of the combined source and receiver directivity was completed to determine optimal source and receiver geometries. The design incorporates four source transducers (1.5–13 kHz) that can be arranged into different configurations, including Maltese Cross, a square and two separated pairs. The receive array comprises 240 hydrophones in 60 groups whose group-centres are separated by 25 cm in both horizontal directions, with each hydrophone group containing four individual elements and a pre-amplifier. After careful consideration, it was concluded that the only way to determine with sufficient accuracy the source–receiver geometry, was to fix the sources and receivers within a rigid array. Positional information for the array is given by a Real Time Kinematic GPS and attitude system incorporating four antennas to give position, heading, pitch and roll. It is shown that this system offers vertical positioning accuracy with a root-mean-square (rms) error less than 2.6 cm, while the horizontal positioning rms error was less than 2.0 cm. The system is configured so that the Chirp source signature can be chosen by software aboard the acquisition vessel. The complete system is described and initial navigational and seismic data results are presented. These data demonstrate that the approach of using fixed source-receiver geometry combined with RTK navigation can provide complete 3D imaging of the sub-surface.     

In-vitro metabolism of benzo[a]pyrene and benzo[a]pyrene-7,8-dihydrodiol by liver and intestinal mucosa homogenates from the winter flounder (Pseudopleuronectes americanus)

Freshly prepared homogenates were used to assess the relative ability of winter flounder (Pseudopleuronectes americanus) liver and intestinal mucosal cells to metabolize the polycyclic aromatic hydrocarbon (PAH) benzo[a]pyrene (BaP) and its proximate carcinogenic metabolite, BaP-7,8-dihydrodiol (7,8-Diol). Data obtained from homogenates prepared from fish previously fed β-naphthoflavone (BNF) indicated that both tissues had similar abilities to metabolize either BaP or 7,8-Diol on a per gram of protein basis. Metabolite profiles produced indicate that water-soluble metabolite formation is favored at low doses. These findings support the hypothesis that the intestine plays an important role in first-pass metabolism of dietary carcinogens in the winter flounder.     

Reproductive Cycle of the Caribbean Feather Star Nemaster rubiginosa (Echinodermata: Crinoidea)

Abstract. The reproductive cycle of the comatulid crinoid Nemaster rubiginosa from Discovery Bay, Jamaica is described histologically. The cycle is annual and may be divided into (1) a "resting" phase (summer) in which most adults possess immature, unsexable gonads, (2) a recovery phase (early fall) marked by the re-initiation of gametogenesis and rapid gonadal growth, (3) a breeding phase (late fall and winter) during which the gonads are mature and repeated spawning likely takes place, and (4) a post-spawning phase (spring) during which relict gametes are removed from the shrinking gonads. Although unsexable individuals predominate during the "resting" phase, a small proportion of the adult population is unsexable at all times of the year. The reproductive condition of animals in the same month in two successive years was very similar, suggesting that the timing of reproduction is quite predictable from year to year. The re-initiation of gametogenesis in the early fall is correlated with both rising sea temperature and shortening daylength, and the October to March breeding season corresponds to the period of short daylengths at the study site. The well-defined and synchronized annual reproductive cycle of Nemaster rubiginosa contrasts with the more prolonged and variable reproductive cycles reported for other tropical crinoids and points to a diversity of breeding patterns among tropical crinoids.     

Nonthermal radio emission from hot star winds

Nonthermal radio emission has been observed from some of the most luminous hot star winds. It is understood to be synchrotron radiation of the relativistic electrons in the winds. To understand how the electrons are accelerated to such high energies and to correctly explain the observed radio flux and spectra require an exhaustive investigation of all the relevant physical processes involved and possibly point to a complex wind structure. In this paper we discuss the logical path toward a comprehensive model of the nonthermal radio emission from hot star winds. Based on the available observational data and fundamental theoretical considerations, we found that the only physically viable and self-consistent scenario is:the nonthermal radio emission is synchrotron radiation of relativistic electrons the electrons are accelerated by shocks via the first-order Fermi mechanism the acceleration has to be in situ in the radio emitting region the shocks formed at the base of the winds have to propagate to beyond the radio photosphere).     

Comprehensive simulation of the middle atmospheric climate: some recent results

This study discusses the results of comprehensive time-dependent, three-dimensional numerical modelling of the circulation in the middle atmosphere obtained with the GFDL SKYHI troposphere-stratosphere-mesosphere general circulation model (GCM). The climate in a long control simulation with an intermediate resolution version (3° in horizontal) is briefly reviewed. While many aspects of the simulation are quite realistic, the focus in this study is on remaining first-order problems with the modelled middle atmospheric general circulation, notably the very cold high latitude temperatures in the Southern Hemisphere (SH) winter/spring, and the virtual absence of a quasi-biennial oscillation (QBO) in the tropical stratosphere. These problems are shared by other extant GCMs. It was noted that the SH cold pole problem is somewhat ameliorated with increasing horizontal resolution in the model. This suggests that improved resolution increases the vertical momentum fluxes from the explicitly resolved gravity waves in the model, a point confirmed by detailed analysis of the spectrum of vertical eddy momentum flux in the winter SH extratropics. This result inspired a series of experiments with the 3° SKYHI model modified by adding a prescribed zonally-symmetric zonal drag on the SH winter westerlies. The form of the imposed momentum source was based on the simple assumption that the mean flow drag produced by unresolved waves has a spatial distribution similar to that of the Eliassen-Palm flux divergence associated with explicitly resolved gravity waves. It was found that an appropriately-chosen drag confined to the top six model levels (above 0.35 mb) can lead to quite realistic simulations of the SH winter flow (including even the stationary wave fields) through August, but that problems still remain in the late-winter/springtime simulation. While the imposed momentum source was largely confined to the extratropics, it produced considerable improvement in the simulation of the equatorial semiannual oscillation, with both the easterly and westerly phases being somewhat more intense than in the control simulation. A separate experiment was conducted in which the SKYHI model was simplified so that it had no topography and so that the seasonal cycle was frozen in perpetual equinox conditions. These changes result in a model that has much reduced interhemispheric asymmetry. This model spontaneously produces a long period mean flow oscillation of considerable amplitude in the tropical upper stratopause. The implication of this result for the general issue of obtaining a QBO in comprehensive GCMs is discussed.     

Effects of heavy metals on the survival ofDiacypris compacta (Herbst) (Ostracoda) from the Coorong,South Australia

The hypermarine southern Coorong is threatened by proposals to drain relatively fresh surface water and groundwater from adjacent agricultural areas into the Coorong. These influent waters carry moderate loads of heavy metals. Acute toxicity of heavy metals toDiacypris compacta, an abundant ostracod in the Coorong, was measured in the laboratory at 18°C in a static system using Coorong water (pH 7.8 salinity 50 ppt). At 4 days (96 h) the mean values of LC₅₀ for copper, zinc, lead and, cadmium respectively were 0.8, 2.1, 3.1 and 4.3 mg L^–1, and at 8 days the respective mean LC₅₀ s were 0.4, 0.7, 2.2 and 1.1 mgL^–1. The effect of two or three metals on mortality was additive in some cases and synergistic in other cases, but generally less than additive. However, in all cases mortality was greater in the presence of two or three metals than in the presence of a single metal. According to ANZECC (1992) guidelines, maximum acceptable concentrations of heavy metals should be no higher than 0.01 x the lowest LC₅₀ value. Using the lowest LC₅₀ values forDiacypris compacta obtained at 8 days, maximum acceptable concentrations in the Coorong would be 4, 5, 9 and 22 gL^–1 for copper, zinc, cadmium and lead respectively, the values for zinc and copper failling below those recommended by ANZECC (1992) for marine waters. Reported concentrations of copper and zinc in surface water and groundwater in areas adjacent to the Coorong sometimes exceed these values, hence drainage of these waters into the Coorong represents a significant hazard to the Coorong biota.