Occurrence and distribution of bacteria indicators,chemical tracers and pathogenic vibrios in Singapore coastal waters

Water quality in Singapore's coastal area was evaluated with microbial indicators, pathogenic vibrios, chemical tracers and physico-chemical parameters. Sampling sites were grouped into two clusters (coastal sites at (i) northern and (ii) southern part of Singapore). The coastal sites located at northern part of Singapore along the Johor Straits exhibited greater pollution. Principal component analysis revealed that sampling sites at Johor Straits have greater loading on carbamazepine, while turbidity poses greater influence on sampling sites at Singapore Straits. Detection of pathogenic vibrios was also more prominent at Johor Straits than the Singapore Straits. This study examined the spatial variations in Singapore's coastal water quality and provided the baseline information for health risk assessment and future pollution management.     

Late quaternary glacial stades in the Cordillera Central,Colombia, based on glacial geomorphology,tephra–soil stratigraphy,palynology, and radiocarbon dating

Using data from glacial geomorphology, tephra–soil stratigraphy and mineralogy, palynology, and radiocarbon dating, a sequence of glacial and bioclimatic stades and interstades has been identified for the last ca. 50000 yr in the Ruiz-Tolima massif, Cordillera Central, Colombia. Six Pleistocene cold stades separated by warmer interstades occurred: before 48000, between 48000 and 33000, between 28000 and 21000, from ≥16000 to ca. 14000, ca. 13000–12400, and ca. 11000–10000 yr BP. Although these radiocarbon ages are minimum-limiting ages obtained from tephra layers on top of tills, the tills are not significantly older because most are bracketed by dated tephra sets in measured stratigraphic sections. Two minor moraine stages likely reflect glacier standstill during cold intervals ca. 7400 yr BP and slightly earlier. Finally, glaciers readvanced between the seventeenth and nineteenth centuries. In contrast to the ice-clad volcanoes of the massif, ca. 34 km² in area above an altitude of ca. 4800 m, the ice cover expanded to 1200 km² during the Last Glacial Maximum (LGM) and was still 800 km² during Late-glacial time (LGT). Glacier reconstructions based on the moraines suggest depression of the equilibrium line altitude (ELA) by ca. 1100 m during the LGM and 500–600 m during LGT relative to the modern ELA, which lies at ca. 5100 m in the Cordillera Central. Glaciers in this region apparently reached their greatest extent when the climate was cold and wet, e.g. during stades corresponding to Oxygen Isotope Stage 3; glaciers were still expanding during the LGM ca. 28000–21000 yr BP, but they shrank considerably after 21000 yr BP because of greatly reduced precipitation. © 1997 John Wiley & Sons, Ltd.     

Forests and floods: Using field evidence to reconcile analysis methods

The extent to which forests, relative to shorter vegetation, mitigate flood peak discharges remains controversial and relatively poorly researched, with only a few significant field studies. Considering the effect purely of change of vegetation cover, peak flow magnitude comparisons for paired catchments have suggested that forests do not mitigate large floods, whereas flood frequency comparisons have shown that forests mitigate frequencies over all magnitudes of flood. This study investigates the apparent inconsistency using field-based evidence from four contrasting field programmes at scales of 0.34–3.1 km². Repeated patterns are identified that provide strong evidence of real effects with physical explanations. Magnitude and frequency comparisons are both relevant to the impact of forests on peak discharges but address different questions. Both can show a convergence of response between forested and grassland/logged states at the highest recorded flows but the associated return periods may be quite variable and are subject to estimation uncertainty. For low to moderate events, the forested catchments have a lower peak magnitude for a given frequency than the grassland/logged catchments. Depending on antecedent soil saturation, a given storm may nevertheless generate peak discharges of the same magnitude for both catchment states but these peaks will have different return periods. The effect purely of change in vegetation cover may be modified by additional forestry interventions, such as road networks and drainage ditches which, by effectively increasing the drainage density, may increase peak flows for all event magnitudes. For all the sites, forest cover substantially reduces annual runoff.     

Density effects on solute release from streambeds

Contaminants that entered the streambed during previous surface water pollution events can be released to the stream, causing secondary pollution of the stream and impacting its eco-environmental condition. By means of laboratory experiments and numerical simulations, we investigated density effects on the release of solute from periodic bedforms. The results show that solute release from the upper streambed is driven by bedform-induced convection, and that density effects generally inhibit the solute release from the lower streambed. Density gradients modify the pore water flow patterns and form circulating flows in the area of lower streambed. The formation of circulating flows is affected by density gradients associated with the solute concentration and horizontal pressure gradients induced by stream slope. The circulating flows near the bottom of the streambed enhance mixing of the hyporheic zone and the ambient flow zone.     

Petrophysics and mineral exploration: a workflow for data analysis and a new interpretation framework

As mineral exploration seeks deeper targets, there will be a greater reliance on geophysical data and a better understanding of the geological meaning of the responses will be required, and this must be achieved with less geological control from drilling. Also, exploring based on the mineral system concept requires particular understanding of geophysical responses associated with altered rocks. Where petrophysical datasets of adequate sample size and measurement quality are available, physical properties show complex variations, reflecting the combined effects of various geological processes. Large datasets, analysed as populations, are required to understand the variations. We recommend the display of petrophysical data as frequency histograms because the nature of the data distribution is easily seen with this form of display. A petrophysical dataset commonly contains a combination of overlapping sub-populations, influenced by different geological factors. To understand the geological controls on physical properties in hard rock environments, it is necessary to analyse the petrophysical data not only in terms of the properties of different rock types. It is also necessary to consider the effects of processes such as alteration, weathering, metamorphism and strain, and variables such as porosity and stratigraphy. To address this complexity requires that much more supporting geological information be acquired than in current practice. The widespread availability of field portable instruments means quantitative geochemical and mineralogical data can now be readily acquired, making it unnecessary to rely primarily on categorical rock classification schemes. The petrophysical data can be combined with geochemical, petrological and mineralogical data to derive explanations for observed physical property variations based not only on rigorous rock classification methods, but also in combination with quantitative estimates of alteration and weathering. To understand how geological processes will affect different physical properties, it is useful to define three end-member forms of behaviour. Bulk behaviour depends on the physical properties of the dominant mineral components. Density and, to a lesser extent, seismic velocity show such behaviour. Grain and texture behaviour occur when minor components of the rock are the dominate controls on its physical properties. Grain size and shape control grain properties, and for texture properties the relative positions of these grains are also important. Magnetic and electrical properties behave in this fashion. Thinking in terms of how geological processes change the key characteristics of the major and minor mineralogical components allows the resulting changes in physical properties to be understood and anticipated.     

Symbiosis between the holothurian Scotoplanes sp. A and the lithodid crab Neolithodes diomedeae on a featureless bathyal sediment plain

Vulnerability to predation may be high for many megafaunal taxa in deep‐sea sedimentary habitats where physical heterogeneity is low. During ROV observations in a bathyal sediment plain off Central California, juveniles of the lithodid crab Neolithodes diomedeae were frequently observed on or under the holothurian (sea cucumber) Scotoplanes sp. A, and are hypothesized to benefit from this association as a nursery or refugium from predation. Ninety‐six percent (n = 574 of 599) of the juvenile N. diomedeae observed (density varied from 0.02–0.75/m² among sites and seasons) in the study area were associated with Scotoplanes sp. A. Of the 2596 Scotoplanes sp. A observed (density varied from 0.48 to 25.90/m²), 22% were attended by at least one juvenile crab, and rarely two crabs (n = 4). Solitary N. diomedeae were rarely observed. This decapod–holothurian symbiosis appears to be largely commensal, with juvenile crabs (carapace width = 0.03–0.31 ×  holothurian length) observed on or beneath Scotoplanes sp. A in a habitat with few refugia from epibenthic predators. Other hypotheses may explain or enhance the potential benefits of the association for N. diomedeae, such as elevated food availability due to the activities of Scotoplanes sp. A. The relationship may be mutualistic if there is a benefit for the holothurian, including the removal of epizoic parasites. Ultimately, the nursery or other effects on the population dynamics of N. diomedeae may be minimal in low‐relief, sediment‐dominated habitats, as very few sub‐adult crabs were observed in the study area and were likely consumed upon outgrowing their refugia. While sedimentary habitats may be a sink for N. diomedeae populations, growth of juvenile crabs during their association with Scotoplanes sp. A should increase energy flow to its predator populations. This association has not been reported previously but may be expected in sediment‐dominated habitats where these species overlap.     

Classifying zones of suitability for manual drilling using textural and hydraulic parameters of shallow aquifers: a case study in northwestern Senegal

A method is proposed that uses analysis of borehole stratigraphic logs for the characterization of shallow aquifers and for the assessment of areas suitable for manual drilling. The model is based on available borehole-log parameters: depth to hard rock, depth to water, thickness of laterite and hydraulic transmissivity of the shallow aquifer. The model is applied to a study area in northwestern Senegal. A dataset of boreholes logs has been processed using a software package (TANGAFRIC) developed during the research. After a manual procedure to assign a standard category describing the lithological characteristics, the next step is the automated extraction of different textural parameters and the estimation of hydraulic conductivity using reference values available in the literature. The hydraulic conductivity values estimated from stratigraphic data have been partially validated, by comparing them with measured values from a series of pumping tests carried out in large-diameter wells. The results show that this method is able to produce a reliable interpretation of the shallow hydrogeological context using information generally available in the region. The research contributes to improving the identification of areas where conditions are suitable for manual drilling. This is achieved by applying the described method, based on a structured and semi-quantitative approach, to classify the zones of suitability for given manual drilling techniques using data available in most African countries. Ultimately, this work will support proposed international programs aimed at promoting low-cost water supply in Africa and enhancing access to safe drinking water for the population.     

High‐temporal resolution fluvial sediment source fingerprinting with uncertainty: a Bayesian approach

This contribution addresses two developing areas of sediment fingerprinting research. Specifically, how to improve the temporal resolution of source apportionment estimates whilst minimizing analytical costs and, secondly, how to consistently quantify all perceived uncertainties associated with the sediment mixing model procedure. This first matter is tackled by using direct X‐ray fluorescence spectroscopy (XRFS) and diffuse reflectance infrared Fourier transform spectroscopy (DRIFTS) analyses of suspended particulate matter (SPM) covered filter papers in conjunction with automatic water samplers. This method enables SPM geochemistry to be quickly, accurately, inexpensively and non‐destructively monitored at high‐temporal resolution throughout the progression of numerous precipitation events. We then employed a Bayesian mixing model procedure to provide full characterization of spatial geochemical variability, instrument precision and residual error to yield a realistic and coherent assessment of the uncertainties associated with source apportionment estimates. Applying these methods to SPM data from the River Wensum catchment, UK, we have been able to apportion, with uncertainty, sediment contributions from eroding arable topsoils, damaged road verges and combined subsurface channel bank and agricultural field drain sources at 60‐ and 120‐minute resolution for the duration of five precipitation events. The results presented here demonstrate how combining Bayesian mixing models with the direct spectroscopic analysis of SPM‐covered filter papers can produce high‐temporal resolution source apportionment estimates that can assist with the appropriate targeting of sediment pollution mitigation measures at a catchment level. © 2015 The Authors. Earth Surface Processes and Landforms published by John Wiley & Sons Ltd.     

Hydro‐meteorological drivers and sources of suspended sediment flux in the pro‐glacial zone of the retreating Castle Creek Glacier,Cariboo Mountains,British Columbia,Canada

Glaciers are major agents of erosion that increase sediment load to the downstream fluvial system. The Castle Creek Glacier, British Columbia, Canada, has retreated ~1.0 km in the past 70 years. Suspended sediment concentration (SSC) and streamflow (Q) were monitored independently at five sites within its pro‐glacial zone over a 60 day period from July to September 2011, representing part of the ablation season. Meteorological data were collected from two automatic weather stations proximal to the glacier. The time‐series were divided into hydrologic days and the shape and magnitude of the SSC response to hydro‐meteorological conditions (‘cold and wet’, ‘hot and dry’, ‘warm and damp’, and ‘storm’) were categorized using principal component analysis (PCA) and cluster analysis (CA). Suspended sediment load (SSL) was computed and summarized for the categories. The distribution of monitoring sites and results of the multivariate statistical analyses describe the temporal and spatial variability of suspended sediment flux and the relative importance of glacial and para‐glacial sediment sources in the pro‐glacial zone. During the 2011 study period, ~ 60% of the total SSL was derived from the glacial stream and sediment deposits proximal to the terminus of the glacier; during ‘storm’ events, that contribution dropped to ~40% as the contribution from diffuse and point sources of sediment throughout the pro‐glacial zone and within the meltwater channels increased. While ‘storm’ events accounted for just 3% of the study period, SSL was ~600% higher than the average over the monitoring period, and ~20% of the total SSL was generated in that time. Determining how hydro‐meteorological conditions and sediment sources control sediment fluxes will assist attempts to predict how pro‐glacial zones respond to future climate changes. Copyright © 2015 John Wiley & Sons, Ltd.     

Deep-sea faunal communities associated with a lost intermodal shipping container in the Monterey Bay National Marine Sanctuary,CA

Carrying assorted cargo and covered with paints of varying toxicity, lost intermodal containers may take centuries to degrade on the deep seafloor. In June 2004, scientists from Monterey Bay Aquarium Research Institute (MBARI) discovered a recently lost container during a Remotely Operated Vehicle (ROV) dive on a sediment-covered seabed at 1281 m depth in Monterey Bay National Marine Sanctuary (MBNMS). The site was revisited by ROV in March 2011. Analyses of sediment samples and high-definition video indicate that faunal assemblages on the container’s exterior and the seabed within 10 m of the container differed significantly from those up to 500 m. The container surface provides hard substratum for colonization by taxa typically found in rocky habitats. However, some key taxa that dominate rocky areas were absent or rare on the container, perhaps related to its potential toxicity or limited time for colonization and growth. Ecological effects appear to be restricted to the container surface and the benthos within ∼10 m.