Fast genetic mapping in barley: case studies of cuticle mutants using RNA-sequencing

Barley(Hordeum vulgare L.) is one of the earliest domesticated crop species and ranked as the fourth largest cereal production worldwide. Forward genetic studies in barley have greatly advanced plant genetics during the last century; however, most genes are identified by the conventional mapping method. Array genotyping and exome-capture sequencing have also been successfully used to target the causal mutation in barley populations, but these techniques are not widely adopted because of associated costs and partly due to the huge genome size of barley. This review summarizes three mapping cases of barley cuticle mutants in our laboratory with the help of RNA-sequencing. The causal mutations have been successfully identified for two of them and the target genes are located in the pericentromeric regions. Detailed information on the mapping-by-sequencing, mapping-and-sequencing, and RNA-sequencing assisted linkage mapping are presented and some limitations and challenges on the mapping assisted by RNA sequencing are also discussed. The alternative and elegant methods presented in this review may greatly accelerate forward genetics of barley mapping, especially for laboratories without large funding.     

流星暴的航天定义

定义ZHR^*以每小时穿过1000平方公里天顶截面的，能在铝质表面打出直径不小于1厘米的弹坑的流星体数，作为流星群对航天安全威胁强度的定量标志，给出了从ZHR到ZHR^*的换算公式．用ZHR^*取代ZHR来评价20世纪90年代以来的一些强流星雨，发现1998年的贾可比尼(天龙座)流星雨对航天安全来说，是比公认的1999、2001、2002年3次狮子座流星暴强数倍的更强流星暴．     

SDSS J143030.22-001115.1： A Misclassified Narrow-line Seyfert 1 Galaxy with Flat X-ray Spectrum

We used multi-component profiles to model the Hβ and [OⅢ]λλ4959,5007 lines of SDSS J143030.22-001115.1, a narrow-line Seyfert 1 galaxy (NLS1) in a sample of 150 NLS1 candidates selected from the Sloan Digital Sky Survey (SDSS), Early Data Release (EDR). After subtracting the Hβ contribution from narrow line regions (NLRs), we found that its full width half maximum (FWHM) of broad Hβ line is nearly 2900km s~(-1) , significantly larger than the customarily adopted criterion of 2000 km s~(-1) . With its weak Fe Ⅱ multiples, we believe that SDSS J143030.22-001115.1 should not be classified as a genuine NLS1. When we calculate the virial black hole masses of NLS1s, we should use the Hβ linewidth after subtracting the NLR component.     

Multistep matched-field inversion for broad-band data from ASIAEX2001

This paper discusses the results of geoacoustic inversion carried out using explosive charge data from the Asian Seas International Acoustic Experiment (ASIAEX) East China Sea (ECS) Experiment. A multifrequency incoherent matched-field inversion processor and a genetic algorithm (GA) are used for the inversion. A multistep matched field inversion approach is presented, which makes use of the varying sensitivities of wave fields at various frequencies to reduce the inversion problem into a sequence of smaller inversions with fewer unknowns to estimate at each stage. Different parameters are estimated using data at different frequencies according to their sensitivities. Inversion results for different areas in the ECS region are summarized and compared with core data.     

Theory of stability, and regulation and control of ecological system in oasis

Starting with analysis on the evolving course of oasis and the characteristics and evolution of transitional zone between oasis and desert, in consideration of ecological elements including plant stomata resistance, area covered by vegetation, and physical elements including albedo of vegetation and bare soil, atmosphere temperature, and humidity, under the condition of the balance among net radiation flux, latent heat flux, and sensible heat flux, the following are calculated: temperatures of vegetation and bare soil in different conditions, as well as the evapotranspiration rate of ecosystem. Analysis on evapotranspiration rate indicates that it depends on both the climate of environment and the physiological and ecological conditions of plants. On certain conditions, the evapotranspiration rate of transitional zone between oasis and desert (i.e. area covered by vegetation less than 20%), in some parameter domains, appears in bifurcation or multiequilibrium state. Meanwhile, in such area, ecosystem is extremely unstable. Any minor change to the balance will cause either increase or reduction of area covered by vegetation in ecosystem, on the basis of discussion on the emergency of these phenomena. This paper is attempting to propose an effective way of destruction and rebuilt ecosystem in transitional zone. The way is to control the evaporation of plant through selecting anti-drought country plant with big stomata resistance, and modify the roughness of the underlying surface in ecosystem by establishing rational interspace structure of plant community, so as to put the degenerative ecosystem into the natural succession track. This primary theory is being verified through observation and analysis on historical data.     

造山带中富集型上地幔的成因——以萨尔托海蛇绿岩块为例

发育于造山带中的蛇绿岩,其剖面下部的地幔橄榄岩部分是造山带地区富集型上地幔的直接标本。其地球化学特点是:主要元素Al_2O_3、TiO_2、CaO、Na_2O、K_2O强烈亏损,而REE,痕量元素和87Sr/86Sr则强烈富集;同时,143Nd/144Nd<0.511836,亦表明它们属于一个富集型的源区。 形成富集型上地幔的主要机制是地幔交代作用,富含不相容元素的低熔岩浆和富Ca-LREE流体与已亏损的地幔橄榄岩发生脉状交代和渗透交代反应,从而造成上地幔中不相容元素的富集。造山带富集型上地幔形成的构造环境是:洋壳从扩张脊向两侧运移并最终拼入造山带这段时间内。富集型上地幔不但存在于大陆区,而且亦存在于造山带地区,它可能是一种全球性的地球内部的化学作用。     

Zircon U–Pb and Hf isotopic study of gneissic rocks from the Chinese Altai: Progressive accretionary history in the early to middle Palaeozoic

Gneissic rocks in the Chinese Altai Mountains have been interpreted as either Paleozoic metasedimentary rocks or Precambrian basement. This study reports geochemical and geochronological data for banded paragneisses and associated gneissic granitoids collected along a NE–SW traverse in the northwestern Chinese Altai. Petrological and geochemical data suggest that the protoliths of the banded gneisses were possibly immature sediments with significant volcanic input and that the gneissic granitoids were derived from I-type granites formed in a subduction environment. Three types of morphological features can be recognized in zircons from the banded gneisses and are interpreted to correlate with different sources. Zircons from five samples of banded paragneiss cluster predominantly between 466 and 528 Ma, some give Neoproterozoic ages, and a few yield discordant Paleoproterozoic to Archean ages. Zircon Hf isotopic compositions indicate that both juvenile/mantle and crust materials were involved in the generation of the source rocks from which these zircons were derived. In contrast, zircons occur ubiquitously as elongated euhedral prismatic crystals in the four samples of the gneissic granitoids, and define single populations for each sample with mean ages between 380 and 453 Ma. The general absence of Precambrian inheritance and positive zircon ?Hf values for these granitoids suggest insignificant crustal contribution to the generation of the precursor magmas. Our data can be interpreted in terms of a progressive accretionary history in early to middle Palaeozoic times, and the Chinese Altai may possibly represent a magmatic arc built on a continental margin dominated by Neoproterozoic rocks.     

新疆黑英山-查汗沙拉-地那达坂地区锑矿成矿远景评价

我国西天山南段的黑英山-查汗沙拉-地那达坂锑多金属矿化区为中亚南天山成矿带的东延部分,区内广泛分布有泥盆系滨浅海含碳碎屑岩和碳酸盐岩,岩石具有较高的Sb背景场,异常多呈Sb、Au、As、Hg等元素组合异常出现,异常区内已发现有查汗沙拉、阿特达坂和地那达坂等多个锑矿(点)床.区内锑矿化及异常均受近Nw向大型逆冲推覆构造系统控制,具有良好的成矿条件和较大的找矿潜力.     

攀西地区铂族元素地球化学异常分布及其筛选

攀西地区不同时代地层的水系沉积物中铂族元素地球化学背景值具有明显的规律性分布.笔者通过对该地区铂族元素含量在各地层中的分布以及地球化学异常的圈定、归并和分类,结合有关铂族矿床地球化学特征的认识,通过对水系沉积物中Pt、Pd综合异常的筛选,在铂族元素综合衬值异常图的基础上共划分出Ⅰ类异常4个、Ⅱ类异常19个、Ⅲ类异常23个以及Ⅳ类异常14个.初步筛选出的19个Ⅱ类异常子区可为进一步开展铂族矿床找矿工作提供依据.     

三道通铜矿地质特征与找矿前景浅析

三道通铜矿位于吉林省桦甸市,华北地台北缘东段之辉南-桦甸-和龙成矿带上,产于高级变质区会全栈穹形构造的北西缘,夹皮沟矿田和王家店矿区之间.产于一定的围岩条件内,受北西向剪切带严格控制,与脉岩有着密切的关系,矿石类型为多金属含重晶石石英脉型,其规模为小型矿床,伴生铅、金、钨、钴等元素,以往找矿工作程度很低.通过对地质特征和成因类型的论述及成矿条件分析,指出了找矿方向并预测了发展前景.