The Philippine National Collection of Microorganisms (PNCM): Repository of microbial diversity of the country

The prime function of the Philippine National Collection of Microorganisms (PNCM), being the national repository of microbial strains, is to collect and preserve strains for their continued viability and availability for future use. To date, a total of 2144 strains of bacteria (1357), yeasts (250), filamentous, fungi (377), algae (14), and strains still to be identified (146) are maintained at the PNCM. These are preserved and maintained using various methods which include modified liquid drying (lyophilization), ultra-low temperature (−70°C) storage in 10% glycerol, storage in sterile soil, distilled water and overlaying with mineral oil. Periodic viability testing is done to assess the stability of these preserved cultures under storage. Aside from preservation and maintenance of cultures, the PNCM is also involved in several research activities. One of these is the isolation, characterization and identification of some Vibrio isolates from the Philippines. Details on this particular study is presented in this report.     

COMPARISON OF HEAVY METAL CONCENTRATIONS IN SURFACE SEDIMENT OF TANJUNG PIAI WETLAND WITH OTHER SITES RECEIVING ANTHROPOGENIC INPUTS ALONG THE SOUTHWESTERN COAST OF PENINSULAR MALAYSIA

1 INTRODUCTIONOur sampling trip to Tanjung Piai wetland in2002 showed that the site had not been developed andrecognized yet as a wetland of international importance(Ramsar). Recently, our field trip in January 2005to the same site to collect sediment sam…     

The air flow number in flotation machine scale-up

The flotation cell is quantified as a mixing device for one, two, and three phase systems using combinations of water, air, and solids. To do this, power consumption was measured as a function of impeller speed, rate of aeration, and solids concentration. Initial suspension of solids and dispersion of suspended solids throughout the water or water/air system were also studied as influenced by impeller speed, particle size and solids concentration. The power number and air flow number were used to correlate the data.Flotation studies with a zinc ore using three sizes of cells of the same design, showed that aeration had to be controlled in the smaller cells to duplicate the results in the cell of commercial size. For optimum results the flow number range in the smallest cell was less than the critical value for suspension of coarse particles. Operating flow numbers for the three cell sizes under optimum conditions were close; commercial cells of the same size operating elsewhere appear to have two to three times higher flow numbers.The general relationships among air flow, impeller speed, particle suspension and flotation are discussed with particular reference to scale-up problems and coarse particle flotation. Both impeller speed and aeration should be considered as variables requiring systematic study and independent adjustment.     

Experimental studies of the development of quasi-two-dimensional turbulence in stably stratified fluid

Quasi-two-dimensional turbulence was generated by towing an array of vertical cylinders through a tank which was filled with a two-layer stratified fluid. Sugar and Epsom salts were used, to give matching refractive indices for the two layers. The interface between the two layers was seeded with approximately 1000 neutrally buoyant particles. The evolution of this quasi-two-dimensional turbulence was visualized by photographing the fluorescent particles illuminated by a horizontal laser sheet traversing in the vertical direction. The three-dimensional particle velocity was obtained by digitizing the streaks. The evolution of the velocity correlations, length scales, one-dimensional and two-dimensional velocity and vorticity spectra were obtained for N = 5.72 s⁻¹, N = 4.43 s⁻¹, and N = 2.55 s⁻¹ (where N is the Brunt-Väisälä frequency). The results showed the physical process of inverse energy cascading and the formation of dominant vortical structures under the influence of density stratification. Compared with idealized two-dimensional turbulence, the flow is highly dissipative at high N, as a result of the frictional dissipation between the interface and the unstratified layers.     

Effects of natural gas condensate - water accommodated fraction on coral larvae

The toxic effects of the water accommodated fraction (WAF) of a natural gas condensate on the larvae of five brooding coral species of the Family Pocilloporidae were examined in short term (96 h) bioassays. Lethality was observed in some larvae of Seriatopora hystrix and Seriatopora guttatus upon exposure to high concentrations of the condensate WAF, while those of Stylophora pistillata, Pocillopora damicornis and Pocillopora verrucosa did not experience mortality. Furthermore, increasing concentrations of WAF produced either delayed or impeded metamorphosis for all species except P. damicornis. Growth of juveniles, exposed to different WAF treatments for 96 h during their larval/early juvenile stages, was measured after 30 d. Marked decrease in subsequent growth rate (polyp count) was observed for S. hystrix, S. guttatus and S. pistillata with increasing WAF concentration. The results showed differential susceptibility of larvae of closely related coral species to oil stress, with the following sensitivity ranking: S. guttatus>S. hystrix>S. pistillata>P. verrucosa>P. damicornis. Oil exposure during the planktonic, larval stage of susceptible corals can adversely affect survivorship, recruitment and/or subsequent colony growth, thereby having profound consequences for the abundance of these corals in space and time.     

The community composition and production of phytoplankton in fish pens of Cape Bolinao, Pangasinan: a field study

From 1995 up to the present, fish pens proliferated in the municipal waters of Bolinao, northern Philippines. Since then, fish kills and phytoplankton blooms have been recurrent. Have fishpens altered the phytoplankton community composition and production of these waters? The phytoplankton community in Cape Bolinao, Lingayen Gulf is typical of a tropical coastal area where diatoms alternate with dinoflagellates during the dry and wet seasons. In the nutrient-rich fish pens, phytoplankton in this study showed a lower diatom/dinoflagellate ratio and unusually high phytoplankton counts of 10(4) cells/l and even as high as 10(5) cells/l. Correlations between physico-chemical parameters, phytoplankton production and community composition were made in 2001. This paper tried to explain the occurrence of a Cylindrotheca closterium bloom (10(5) cells/l), during the dry season of the same year and a Prorocentrum minimum bloom (4.7 x 10(5) cells/l), which accompanied a massive fish kill during January 2002.     

Effects of turbidity caused by nutrient loading on benthic dynamics

The benthic response to nutrient loading of the water column was determined in the transition from early to mid-summer in a semi-enclosed, shallow estuarine ecosystem of the Baltic Sea. The procedure involved the inoculation of an in situ mesocosm with nitrogen and phosphorus to induce hypertrophic conditions, and comparison of this treated compartment with an untreated control. Sediment activity was assessed as oxygen turn-over, and measured in the laboratory with a simulated in situ polarographic flow-through method. Nutrient addition induced the development of pelagic organisms, particularly phytoplankton and protozoa, which resulted in turbidity within the water column. The latter appeared to depress benthic primary productivity. On the other hand, the greater organic matter load, upon sedimenting, caused increased biological respiration of the sediment. Chemical oxygen demand was unaffected by the increased organic matter input.