Bacterial and Virus‐Like Particle Abundances in Purged and Unpurged Groundwater Depth Profiles

Bacteria and viruses are ubiquitous in subterranean aquatic habitats. Bacterial abundance is known to vary with depth in aquifers; however, whether viral abundance varies with depth is less well known. Here we use flow cytometry (FCM) to enumerate bacteria and virus‐like particles (VLP) from groundwater depth profiles. Groundwater samples were obtained from a set of nested piezometers from depths of 15, 30, 45, 60, 80, and 90 m and bacteria and VLP abundances were determined in purged aquifer water and unpurged water at each slot depth. Mean bacterial abundance (cells / mL) was not significantly different in unpurged water (3.2 × 10⁵) compared to purged water (1.4 × 10⁵); however, mean VLP abundance (particles / mL) was significantly greater in unpurged water (4.4 × 10⁵) compared to purged water (2.3 × 10⁵). Purged water was used to investigate the aquifer depth profile and bacterial and VLP abundances were observed to vary significantly between depths. The virus‐bacteria ratio was determined and was observed to steadily increase with depth. Overall, our data indicate the dynamic nature of bacterial and viral abundances in subsurface environments which should be considered when designing groundwater microbial sampling methodologies.     

蒙新高原岱海夏季叶绿素a浓度空间分布及影响因子

基于2019年夏季(8月)对岱海水样的实测数据分析,通过运用克里金插值、相关性分析、多元线性逐步回归、主成分分析方法,探究了叶绿素a(Chl.a)的空间分布特征及其与水环境因子的相关关系,并讨论了相应的防治措施。研究显示:Chl.a空间分布呈现由岸边向湖心递减的趋势,总氮(TN)、总磷(TP)、氨氮(NH₃-N)、硝态氮(NO^-₃-N)、正磷酸盐(PO^3-₄-P)空间分布特征与Chl.a空间分布特征相近,采样期内岱海湖局部区域水质状况已达到富营养状态;Chl.a与浊度(Turbidity)、TP、TN、悬浮物(SS)、pH、NO^-₃-N、NH₃-N、PO^3-₄-P、蓝绿藻丰度(CYANO)呈极显著正相关,与溶解氧(DO)呈显著负相关,与电导率(Cond.)呈正相关、与氮磷比(TN/TP)呈负相关;各湖区Chl.a与环境因子相关关系不同,全湖逐步线性回归方程为Y_Chl.a=-21.42+8.658X_pH-0.865X_DO+0.779X_NH3-N+0.699X_Turbidity+0.502X_CYANO;岱海不同湖区因子对Chl.a浓度的影响存在差异,各湖区Chl.a与环境因子相关关系不同,通过岱海与我国其他湖泊Chl.a与环境因子的相关性关系对比分析,湖泊地理属性差异及营养物质输入浓度是影响Chl.a变化的重要因素;本研究岱海的TN/TP平均值为12.23,说明夏季岱海湖Chl.a变化为氮磷共同限制。     

Phytoplankton biomass size structure and its regulation in the Southern Yellow Sea (China): Seasonal variability

Phytoplankton size structure plays a significant role in controlling the carbon flux of marine pelagic ecosystems. The mesoscale distribution and seasonal variation of total and size-fractionated phytoplankton biomass in surface waters, as measured by chlorophyll a (Chl a), was studied in the Southern Yellow Sea using data from four cruises during 2006–2007. The distribution of Chl a showed a high degree of spatial and temporal variation in the study area. Chl a concentrations were relatively high in the summer and autumn, with a mean of 1.42 and 1.27 mg m⁻³, respectively. Conversely, in the winter and spring, the average Chl a levels were only 0.98 and 0.99 mg m⁻³. Total Chl a showed a clear decreasing gradient from coastal areas to the open sea in the summer, autumn and winter cruises. Patches of high Chl a were observed in the central part of the Southern Yellow Sea in the spring due to the onset of the phytoplankton bloom. The eutrophic coastal waters contributed at least 68% of the total phytoplankton biomass in the surface layer. Picophytoplankton showed a consistent and absolute dominance in the central region of the Southern Yellow Sea (>40%) in all of the cruises, while the proportion of microphytoplankton was the highest in coastal waters. The relative proportions of pico- and nanophytoplankton decreased with total biomass, whereas the proportion of the micro-fraction increased with total biomass. Relationships between phytoplankton biomass and environmental factors were also analysed. The results showed that the onset of the spring bloom was highly dependent on water column stability. Phytoplankton growth was limited by nutrient availability in the summer due to the strong thermocline. The combined effects of P-limitation and vertical mixing in the autumn restrained the further increase of phytoplankton biomass in the surface layer. The low phytoplankton biomass in winter was caused by vertical dispersion due to intense mixing. Compared with the availability of nutrients, temperature did not seem to cause direct effects on phytoplankton biomass and its size structure. Although interactions of many different environmental factors affected phytoplankton distributions, hydrodynamic conditions seemed to be the dominant factor. Phytoplankton size structure was determined mainly by the size-differential capacity in acquiring resource. Short time scale events, such as the spring bloom and the extension of Yangtze River plume, can have substantial influences, both on the total Chl a concentration and on the size structure of the phytoplankton.     

Harmful algal blooms (HABs) in Daya Bay, China: An in situ study of primary production and environmental impacts

A month-long investigation of phytoplankton biomass and primary production (PP) was carried out during a harmful algal bloom (HAB) in Daya Bay, China, in 2003. During the bloom, the phytoplankton community was dominated by Scrippsiella trochoidea and Chattonella marina. The phytoplankton biomass (Chl a) and PP reached peak levels of 519.21 mg m⁻³ and 734.0 mgC m⁻³ h⁻¹, respectively. Micro-phytoplankton was the key contributor to Chl a and PP in a cage-culture area and in the adjacent HAB-affected waters, with percentages of up to 82.91% and 84.94%, respectively. The HAB had complicated relationships with hydrological and meteorological factors in Daya Bay. However, the water around the cage-culture area always showed statistically greater phytoplankton biomass and nutrient loadings than in adjacent waters, suggesting that this was the “trigger area” of the bloom. The spatial and temporal distribution of diverse HABs in Daya Bay, their ecological characteristics, and their environmental impacts are also discussed in this paper.     

Dynamics and sources of dissolved organic carbon during phytoplankton bloom in hypereutrophic Lake Taihu (China)

To establish the influence of phytoplankton blooms on the dynamics and sources of dissolved organic carbon (DOC) in Lake Taihu, the concentrations and stable carbon isotope values (δ¹³C) of DOC and particulate organic carbon (POC) were analyzed, along with environmental factors, including water temperature, chlorophyll a (Chl a) concentration, phytoplankton community and total bacterial abundance, from March to August 2013 at five sites in Lake Taihu. Significant differences were observed in the DOC concentrations and δ¹³C_DOC values at the sampling sites. On average, the proportion of DOC in the total organic carbon (TOC) pool ranged from 30% ± 10% to 81% ± 7%. POC was positively associated with both Chl a concentration and cyanobacteria biomass, suggesting that cyanobacteria blooms contribute to the POC pool in Lake Taihu. Depleted ¹³C in DOC relative to POC was observed in August, indicating that DOC was partially derived from POC in August. However, Chl a explained only 40% of the variation in DOC in the entirety of Lake Taihu, and at two sites far from the estuary, the contribution of allochthonous carbon was less than 50% in August. These results suggested a greater influence of allochthonous sources on the DOC pool. Moreover, the biodegradability of DOC was further determined by the total dissolved carbohydrates to DOC ratio (TCHO/DOC), specific UV absorbance (SUVA₂₅₄), and the concentrations of bioavailable DOC (BDOC). On average, 17% of the variation in DOC was attributable to the BDOC pool, and the BDOC concentration correlated positively with Chl a, cyanobacteria biomass, and total bacterial abundance, suggesting that cyanobacteria–derived DOC is biodegradable and is preferentially utilized by bacteria.     

东江惠州河流段人工基质附着硅藻群落的季节性动态

硅藻群落结构特征是反映河流水生态状态的重要生物指标,但我国多数河流中还缺少硅藻种类组成与季节变化的基本数据.2010年用瓷砖片作为人工基质研究东江惠州河流段附着硅藻群落结构的季节性变化,共鉴定出附着硅藻40属153种(包括亚种和变种),主要的优势属有曲壳藻属(Achnanthidium)、异极藻属(Gomphonema)、直链藻属(Melosira)、舟形藻属(Navicula)、菱形藻属(Nitzschia)、脆杆藻属(Synedra)等.Gomphonema parvulum和Nitzschia palea为该河流段的广泛性藻种,且相对丰度的季节性变化明显.RDA分析表明,水温、DO、NH4+-N、PO34--P、电导率、pH值等对附着硅藻群落结构有重要影响.在丰水期,水量对于运动能力较强的N.palea的相对丰度具有明显的影响.     

Effect of mid-oceanic ballast water exchange on virus-like particle abundance during two trans-Pacific voyages

Ballast water is a potential source of invasive species, including viruses that target a variety of hosts. We sampled ballast during two trans-Pacific voyages and analyzed the efficacy of mid-oceanic exchange in reducing virus-like particle (VLP) abundance. Exchange did not significantly reduce virus abundance during the first voyage (P = 0.874), whereas it reduced viral abundance 3.9-fold from 1.8 × 10⁷ to 0.47 × 10⁷ VLP mL⁻¹ during the second voyage (P < 0.0001). Despite the impact of exchange during the second voyage, virus abundances were not significantly different between exchanged and unexchanged tanks upon arrival in Canada (P = 0.363) and Canadian port water samples (P = 0.502). Regressions between environmental parameters and VLP abundance uncovered negative correlations between salinity and viral abundance during one, and dissolved oxygen and viral abundance during the second voyage. In summary, ballast tanks are highly variable with respect to total virus abundance, and the efficacy of exchange requires investigation into the dynamics of specific viruses.     

喀斯特筑坝河流中生物碳泵效应的碳施肥及对水化学时空变化的影响——以贵州平寨水库及红枫湖为例

耦联水生光合作用的碳酸盐风化碳汇是全球碳循环的重要组成部分,而生物碳泵效应是稳定碳酸盐风化碳汇的关键机制.河流筑坝后,生物碳泵效应的变化、控制因素及对水化学影响的研究甚少.本研究对2个喀斯特筑坝河流平寨水库和红枫湖进行系统采样,以研究河流筑坝后生物碳泵效应的变化、控制因素及对水化学的影响.研究结果表明,入库河流的水化学变化不明显,而2个水库的水化学则表现出显著的季节变化特征,具体表现为水库的水温和pH均呈现出夏季高、冬季低的变化特征,而电导率（EC）、HCO₃^-浓度和pCO₂则表现出夏季低、冬季高的季节变化特征.以叶绿素a（Chl.a）浓度和溶解氧（DO）饱和度指代的生物碳泵效应则是在夏季最强、冬季最弱.生物碳泵效应利用溶解性无机碳（DIC）,形成有机质并释放出氧气,是造成夏季水库pH值和DO饱和度升高,电导率（EC）、HCO₃^-浓度和pCO₂降低的主要因素.空间上,水库的Chl.a浓度及DO饱和度均大于河水,EC、HCO₃^-浓度和pCO₂均小于河水,这表明河流筑坝后,由于水库的“湖泊化”导致水库的生物碳泵效应显著提高.通过对Chl.a与碳、氮和磷浓度及化学计量比的相关性分析发现,平寨水库和红枫湖的生物碳泵效应受到碳施肥的影响.平寨水库和红枫湖水库生物碳泵效应碳施肥机制的发现,表明在喀斯特地区,生物碳泵效应不仅受到氮磷元素的控制,也受到碳元素的控制,因此在富营养化湖泊治理时,也应考虑碳的影响.     

2007-2019年太湖藻型和草型湖区叶绿素a变化特征及影响因子

基于太湖31个站点的逐月监测数据,分析了2007-2019年太湖藻型湖区和草型湖区的叶绿素a变化特征,并分析研究不同环境因子对不同类型湖区叶绿素a的影响.结果表明,近年来太湖不同类型湖区的总磷浓度和叶绿素a浓度变化基本一致,均呈波动上升趋势.不同类型湖区的总磷浓度拐点均为2015年,叶绿素a浓度拐点均为2016年.最低月平均水温、前冬积温、年平均水温、年均风速与藻型湖区和草型湖区叶绿素a浓度均呈显著相关.沉水植物分布面积与草型湖区叶绿素a浓度之间呈显著相关.湖西区年内和年度降雨剧烈变化,湖西区年降雨量与不同类型湖区当年叶绿素a浓度的关系不明显,5日极端降雨量与不同类型湖区下年度叶绿素a浓度均呈显著正相关.太湖蓝藻水华强度在短期内可能仍会处于较高水平,迫切需要高度重视高温时段太湖蓝藻打捞处置工作,保障饮用水安全;同时,要进一步加强湖西区强降雨期间的非点源污染防控措施研究,推动入湖污染通量稳步降低,并探索东西山之间及东茭咀附近水域沉水植物生态修复技术,降低风浪扰动作用,尽快恢复相关重要水域的沉水植物.     

太湖悬浮颗粒物细菌碱性磷酸酶编码基因的分布特征

颗粒态有机磷的碱性磷酸酶矿化是水生态系统磷循环的重要环节,对细菌碱性磷酸酶编码基因的解析有利于揭示浅水富营养化湖泊有机磷矿化的微生物驱动机制.本文以太湖不同生态类型湖区悬浮颗粒物为研究对象,运用荧光定量PCR技术,探究太湖水体中悬浮颗粒物细菌碱性磷酸酶phoX和phoD基因的时空分布特征,以及影响两类基因丰度的主要环境因子.结果表明：太湖不同生态类型湖区中phoD基因丰度是phoX基因的6~42倍,且二者均存在显著的时空分布差异.6月,河口区phoX（9.18×10⁴ copies/L）和phoD（1.88×10⁶ copies/L）基因丰度均最高,其次分别为草型区、湖心区和藻型区.与6月相比,9月各湖区phoD基因丰度显著降低,而phoX基因丰度在藻型区和草型区则有所升高.9月,草型区phoX基因丰度最高（5.70×10⁴ copies/L）,河口区最低（1.49×10⁴ copies/L）.水生植物对phoX和phoD基因丰度具有重要贡献.悬浮颗粒物细菌phoX基因丰度可能被低估.溶解氧、总氮和总磷是影响太湖phoX和phoD基因丰度的主要环境因子.     

微囊藻水华期间水体及藻体上细菌的动态

通过对水体中及附着在藻类上的细荫数量、代谢活性细菌、Chl.a浓度等的研究,探讨了藻类与细菌之间的代谢耦联关系,结果表明:1)水体中细菌的丰度随着Chl.a浓度的增加而逐渐增大(r2=0.466,P<0.05),但其峰值滞后于Chl.a;附在藻体表面上的细菌也呈现出相似的变化规律;2)水体中代谢活性细菌数量与总细菌数量显著相关(r2=0.678,P<0.05);附着在藻体上的代谢活性细菌虽然总数量低于水体中的代谢活性细菌,但二者之间亦存在显著的相关性(r2=0.836,P<0.05).3)藻类表面附着细菌的数量取决与藻类的生长状况,附着在藻类体上的代谢活性细菌的比率均高于水体中代谢活性细菌的比率,且在水华盛行期间呈逐渐增加的趋势.     

Crustacean zooplankton distribution patterns and their biomass as related to trophic indicators of 29 shallow subtropical lakes

A comparative limnological study was carried out to present a snapshot of crustacean zooplankton communities and their relations to environmental factors to test whether there is a consistent relationship between crustacean biomass and trophic indicators among lake groups with similar trophic conditions. The study lakes showed a wide range of trophic status, with total phosphorus (TP) ranging from 0.008 to 1.448 mg L⁻¹, and chlorophyll a from 0.7 to 146.1 μg L⁻¹, respectively. About 38 species of Crustacea were found, of which Cladocera were represented by 25 taxa (20 genera), and Copepoda by 13 taxa (11 genera). The most common and dominant species were Bosmina coregoni, Moina micrura, Diaphanosoma brachyurum, Cyclops vicinus, Thermocyclops taihokuensis, Mesocyclops notius and Sinocalanus dorrii. Daphnia was rare in abundance. Canonical correspondence analysis showed that except for four species (D. hyalina, S. dorrii, C. vicinus and M. micrura), almost all the dominant species had the same preference for environmental factors. Temperature, predatory cyclopoids and planktivorous fishes seem to be the key factors determining species distribution. TP was a relatively better trophic indicator than chlorophyll a to predict crustacean biomass. Within the three groups of lakes, however, there was no consistent relationship between crustacean biomass and trophic indicators. The possible reason might be that top-down and bottom-up control on crustaceans vary with lake trophic state. The lack of significant negative correlation between crustacean biomass and chlorophyll a suggests that there was little control of phytoplankton biomass by macrozooplankton in these shallow subtropical lakes.     

Sr fluxes and isotopic compositions of the eleven rivers originating from the Qinghai-Tibet Plateau and their contributions to <Superscript>87</Superscript>Sr/<Superscript>86</Superscript>Sr evolution of seawater

To evaluate influence of chemical weathering of the Qinghai-Tibet Plateau (QTP) on seawater ⁸⁷Sr/⁸⁶Sr variation, river water and sediment samples were collected, and their Sr concentrations and isotopic compositions analyzed, from the seven large rivers that originated from the QTP. By combining these with the data of the Ganges, Brahmaputra, Indus and Irrawaddy originated in the southern QTP, the total Sr flux of the eleven rivers reaches 3.47×10⁹ mol·a⁻¹, which accounts for 10.2% of the total Sr flux transported by the global rivers. The weighted mean ⁸⁷Sr/⁸⁶Sr is 0.71694, higher than the average value of the global rivers. The ⁸⁷Sr_ex (⁸⁷Sr flux in excess of the seawater ⁸⁷Sr/⁸⁶Sr ratio) of the Chinese seven rivers is 1.55×10⁶ mol·a⁻¹, only accounting for about 6% of the value of the eleven rivers originated from QTP, and the Ganges-Brahmaputra system accounts for 86%. We assume that the QTP rivers have no strontium contributions to the oceans before ∼40 Ma and the Sr fluxes of the global rivers, except the QTP eleven rivers, are constant, then a maximum linear increase in Sr fluxes of the QTP rivers from zero to the modern value in response to tectonic uplift can explain ∼69% increase of seawater ⁸⁷Sr/⁸⁶Sr over the past ∼40 Ma and the remainder of 31% is perhaps provided from other factors. Supported by National Natural Science Foundation of China (Grant Nos. 40473009, 40331001, 40873001)     

Viriobenthos in aquatic sediments: variability in abundance and production and impact on the C-cycle

In the last 15 years viruses have been acknowledged as important components of the benthic microbial community, but our understanding of their role in the functioning of aquatic systems remains poor. Viruses can affect bacterial assemblages and mineralization activities, but the extent of their influence remains unclear. We synthesised available data on viriobenthos dynamics to understand which factors drive the variability in their abundance and production and to quantify their influence on the benthic carbon cycle. Results highlighted a large variability in viral abundance (from 2 × 10⁸ to 7 × 10⁹ virus ml^?1) and production estimates (from 1 × 10⁷ to 5 × 10⁸ virus ml^?1 h^?1) obtained with different techniques. This variability limits the comparability of data across studies and indicates the need to improve protocols and develop standard methods. The dynamics of viruses infecting prokaryotes appeared linked to prokaryotic metabolism, supporting the hypothesis that benthic viruses originate directly in the sediment as a result of infection events rather than sinking from the water column. Sediment characteristics (porosity, temperature, depth) appeared to effect viral production, mostly indirectly by influencing bacterial productivity and abundance, but possibly also interfering with the rate of virus–host encounter. Conversely, trophic status appeared unrelated to viral parameters. Viral contribution to carbon turnover appeared low and unrelated to temperature, water depth, trophic status and salinity. More detailed studies are needed to understand the pelagic contribution to the viriobenthos and the extent to which dissolved organic carbon released by viruses is effectively used by bacteria.     

Seasonal dynamics of zooplankton in Lake Huetzalin, Xochimilco (Mexico City, Mexico)

We quantified the seasonal changes in the zooplankton abundances collected from the Huetzalin Lake (Mexico City, Mexico) for two years (February 2003–January 2004 and then March 2005–February 2006). Selected physicochemical variables (Secchi depth, temperature, pH, conductivity, dissolved oxygen, phosphorus, nitrogen, carbon and chlorophyll a concentration) were also measured at the time of zooplankton collection. The data on zooplankton abundances and the physicochemical variables were subjected to multiple correlation analysis and we also derived Shannon–Wiener species diversity index. Secchi depth ranged from 9 to 65 cm. Generally the lake was alkaline (pH 7–12). The conductivity ranged from 500–1000 mS cm⁻¹, while the mean water temperature was 20.5 °C. Dissolved oxygen levels were generally >3 mg L⁻¹ and were higher in the winter than warmer months. Nitrates (90–95 μg L⁻¹) and phosphates (.2–.5 mg L⁻¹) indicated that the water was eutrophic. Chlorophyll a levels ranged from 143 to 696 μg L⁻¹ during the study period. The zooplankton community was dominated by rotifers (46 species), followed by cladocerans (9 species) and there were only two copepod species. The dominant rotifer species were Brachionus angularis, Brachionus calyciflorus, Brachionus havanaensis, Brachionus quadridentatus, Lecane bulla and Polyarthra vulgaris. Rare rotifer species in Lake Huetzalin were Lecane ohioensis, Dicranophorus forcipatus, Lecane pyriformis, Lindia torulosa, Pleurotrocha petromyzon and Brachionus durgae. Highest densities (occasional peaks of 400 ind L⁻¹) of B. quadridentatus occurred between April and December, while B. havanaensis reached peak densities, during June to October. B. calyciflorus reached densities higher than 1240 ind L⁻¹ during May–September. Cladoceran and copepod densities in Lake Huetzalin were much lower than that of the rotifers. This study confirmed the earlier findings that Xochimilco system of canals is dominated by rotifers and the crustacean zooplankton have much lower abundances possibly due to predation from fish.     

Interactions between freshwater input, light, and phytoplankton dynamics on the Louisiana continental shelf

We examined the effects of freshwater flow and light availability on phytoplankton biomass and production along the Louisiana continental shelf in the region characterized by persistent spring–summer stratification and widespread summer hypoxia. Data were collected on 7 cruises from 2005 to 2007, and spatially-averaged estimates of phytoplankton and light variables were calculated for the study area using Voronoi polygon normalization. Shelf-wide phytoplankton production ranged from 0.47 to 1.75 mg C m⁻² d⁻¹ across the 7 cruises. Shelf-wide average light attenuation (k_d) ranged from 0.19–1.01 m⁻¹ and strongly covaried with freshwater discharge from the Mississippi and Atchafalaya Rivers (R²=0.67). Interestingly, we observed that the euphotic zone (as defined by the 1% light depth) extended well below the pycnocline and to the bottom across much of the shelf. Shelf-wide average chlorophyll a (chl a) concentrations ranged from 1.4 to 5.9 mg m⁻³ and, similar to k_d, covaried with river discharge (R²=0.83). Also, chl a concentrations were significantly higher in plume versus non-plume regions of the shelf. When integrated through the water-column, shelf-wide average chl a ranged from 26.3 to 47.6 mg m⁻², but did not covary with river discharge, nor were plume versus non-plume averages statistically different. The high integrated chl a in the non-plume waters resulted from frequent sub-pycnocline chl a maxima. Phytoplankton production rates were highest in the vicinity of the Mississippi River bird's foot delta, but as with integrated chl a were not statistically different in plume versus non-plume waters across the rest of the shelf. Based on the vertical distribution of light and chl a, a substantial fraction of phytoplankton production occurred below the pycnocline, averaging from 25% to 50% among cruises. These results suggest that freshwater and nutrient inputs regulate shelf-wide k_d and, consequently, the vertical distribution of primary production. The substantial below-pycnocline primary production we observed has not been previously quantified for this region, but has important implications about the formation and persistence of hypoxia on the Louisiana continental shelf.