Attenuation of photosynthetically available radiation (PAR) in Florida Bay: Potential for light limitation of primary producers

Light attenuation in marine ecosystems can limit primary production and determine the species composition and abundance of primary producers. In Florida Bay, the importance of understanding the present light environment has heightened as major upstream water management restoration projects have been proposed and some are already being implemented. We analyzed a 2-yr (2001–2003) data set of the light attenuation coefficient (K_t) and its principal components (water, chromophoric dissolved organic matter [CDOM], tripton, phytoplankton) obtained at 40 stations within Florida Bay, calibrated synoptic underway data to produce high spatial resolution maps, examined the potential for light limitation, and quantified the individual effect of each component upon light attenuation. Tripton was the dominant component controlling light attenuation throughout Florida Bay, whereas the contribution of chlorophylla and CDOM to K_t was much smaller in all regions of Florida Bay. It was possible to accurately estimate the light attenuation coefficient from component concentrations, using either a mechanistic or a statistical model with root mean square errors of 0.252 or 0.193 m⁻¹, respectively. Compared to other estuaries, Florida Bay had the lowest overall K_t and the greatest relative contribution from tripton. Comparing the recent data to a study of Florida Bay’s light environment conducted in 1993–1994, we found that overall water clarity in the Bay increased significantly, indicated by a nearly 3-fold decrease in K_v as a result of lower tripton concentrations, although the percent contribution of each of the components to K_t is unchanged. Only the northwest corner of Florida Bay, an area comprised of approximately 8% of the Bay’s total area, was found on average to have sufficient light attenuation to limit the growth of seagrasses. This is much less extensive than in 1993–1994, when seagrass growth was potentially limited by light at over 50% of the stations sampled.     

The relative importance of chlorophyll and colored dissolved organic matter (CDOM) to the prediction of the diffuse attenuation coefficient in shallow estuaries

The availability of underwater light is a critical factor in the growth and abundance of primary producers in shallow embayments. The goal of this study was to examine the relative importance of factors influencing light availability in this type of water body. Many simulation models of aquatic ecosystems predict light attenuation from chlorophyll or phytoplankton stock. In the three southern New England sites studied here, no useful relationship was found to exist between chlorophyll and K_PAR (the diffuse attenuation coefficient of photosynthetically active radiation; Kirk 1994; Mobley 1994). In 40 of 53 cases, a regression of chlorophyll versus K_PAR was not statistically significant. Variation in K_PAR did demonstrate a correlation to salinity, implicating a freshwater source of light attenuating material. This was true even in a system with little freshwater inflow. Colored dissolved organic matter (CDOM) is one such terrestrial input that enters estuaries from their watersheds and can strongly influence the availability of light to aquatic primary producers. This study demonstrated that over 70% of the variability in the K_PAR coefficient can be attributed to CDOM in the shallow estuaries studied. This illustrates the need for improved model formulations that include CDOM in the prediction of light attenuation in shallow coastal systems. A new equation has been developed to predict K_PAR with CDOM.     

Water column light attenuation estimation to simulate phytoplankton population in tidal estuary

The penetration of sunlight into the water column plays a critical role in the aquatic ecosystem. The irradiance available for primary production in a water body depends on the incident light at the water surface, light extinction in the water column, and depth. In this study, the light attenuation through the water column of the Danshuei River–Keelung River estuary was estimated. The measurement of photosynthetically active radiation (PAR) indicates that the conventional exponential attenuation of light with depth is a very good model. A light attenuation coefficient may be derived from the PAR measurements at each location. The regression with salinity yields a good correlation, indicating that the fraction of seawater should be a good parameter for estimating the water column light attenuation coefficient (K _d ). A laterally averaged two-dimensional finite difference model for hydrodynamic and water quality model was performed and applied to simulate the phytoplankton population at the lower reach of the Danshuei River estuary. In the process of phytoplankton population simulation, the regression model of K _d and salinity was incorporated in the water quality model. The simulated results show that the modeled concentration of chlorophyll a matched the measured values at the lower reach of the Danshuei River estuary.     

Habitat requirements for submerged aquatic vegetation in Chesapeake Bay: Water quality, light regime, and physical-chemical factors

We developed an algorithm for calculating habitat suitability for seagrasses and related submerged aquatic vegetation (SAV) at coastal sites where monitoring data are available for five water quality variables that govern light availability at the leaf surface. We developed independent estimates of the minimum light required for SAV survival both as a percentage of surface light passing though the water column to the depth of SAV growth (PLW _min) and as a percentage of light reaching reaching leaves through the epiphyte layer (PLL _min). Value were computed by applying, as inputs to this algorithm, statistically dervived values for water quality variables that correspond to thresholds for SAV presence in Chesapeake Bay. These estimates ofPLW _min andPLL _min compared well with the values established from a literature review. Calcultations account for tidal range, and total light attenuation is partitioned into water column and epiphyte contributions. Water column attenuation is further partitioned into effects of chlorophylla (chla), total suspended solids (TSS) and other substances. We used this algorithm to predict potential SAV presence throughout the Bay where calculated light available at plant leaves exceededPLL _min. Predictions closely matched results of aerial photographic monitoring surveys of SAV distribution. Correspondence between predictions and observations was particularly strong in the mesohaline and polythaline regions, which contain 75–80% of all potential SAV sites in this estuary. The method also allows for independent assessment of effects of physical and chemical factors other than light in limiting SAV growth and survival. Although this algorithm was developed with data from Chesapeake Bay, its general structure allows it to be calibrated and used as a quantitative tool for applying water quality data to define suitability of specific sites as habitats for SAV survival in diverse coastal environments worldwide.     

Estimation of colored dissolved organic matter and salinity fields in case 2 waters using SeaWiFS: Examples from Florida Bay and Florida Shelf

Estimates of water quality variables such as chlorophylla concentration (Chl), colored dissolved organic matter (CDOM), or salinity from satellite sensors are of great interest to resource managers monitoring coastal regions such as the Florida Bay and the Florida Shelf. However, accurate estimates of these variables using standard ocean color algorithms have been difficult due to the complex nature of the light field in these environments. In this study, we process SeaWiFS satellite data using two recently developed algorithms; one for atmospheric correction and the other a semianalytic bio-optical algorithm and compare the results with standard SeaWiFS algorithms. Overall, the two algorithms produced more realistic estimates of Chl and CDOM distributions in Florida Shelf and Bay waters. Estimates of surface salinity were obtained from the CDOM absorption field assuming a conservative mixing behavior of these waters. A comparison of SeaWiFS-derived Chl and CDOM absorption with field measurements in the Florida Bay indicated that although well correlated, CDOM was underestimated, while Chl was overestimated. Bottom reflectance appeared to affect these estimates at the shallow central Bay stations during the winter. These results demonstrate the need for new bio-optical algorithms or tuning of the parameters used in the bio-optical algorithm for local conditions encountered in the Bay.     

Calculating optical water quality targets to restore and protect submersed aquatic vegetation: Overcoming problems in partitioning the diffuse attenuation coefficient for photosynthetically active radiation

Submersed aquatic vegetation (SAV) is an important component of shallow water estuarine systems that has declined drastically in recent decades. SAV has particularly high light requirements, and losses of SAV have, in many cases, been attributed to increased light attenuation in the water column, frequently due to coastal eutrophication. The desire to restore these valuable habitats to their historical levels has created the need for a simple but accurate management tool for translating light requirements into water quality targets capable of supporting SAV communities. A procedure for calculating water quality targets for concentrations of chlorophyll and total suspended solids (TSS) is derived, based on representing the diffuse attenuation coefficient for photosynthetically active radiation, K_d(PAR), as a linear function of contributions due to water plus colored dissolved organic matter (CDOM), chlorophyll, and TSS. It is assumed that K_d(PAR) conforms to the Lambert-Beer law. Target concentrations are determined as the intersection of a line representing intended reduction of TSS and chlorophyll by management actions, with another line describing the dependence of TSS on chlorophyll at a constant value of K_d(PAR). The validity of applying the Lambert-Beer law to K_d(PAR) in estuarine waters was tested by comparing the performance of a linear model of K_d(PAR) with data simulated using a more realistic model of light attenuation. The linear regression model tended to underestimate K_d(PAR) at high light attenuation, resulting in erroneous predictions of target concentrations at shallow restoration depths. The errors result more from the wide spectral bandwidth of PAR, than from irrecoverable nonlinearities in the diffuse attenuation coefficient per se. In spite of the failure of the Lambert-Beer law applied to K_d(PAR), the variation of TSS with chlorophyll at constant K_d(PAR) determined by the more mechanistic attenuation model was, nevertheless, highly linear. Use of the management tool based on intersecting lines is still possible, but coefficients in the line describing the dependence of TSS on chlorophyll at constant K_d(PAR) must be determined empirically by application of an optical model suitably calibrated for the region of interest. An example application of the procedure to data from the Rhode River, Maryland, indicates that approximately 15% reduction in both TSS and chlorophyll concentrations, or 50% reduction in chlorophyll alone, will be needed to restore conditions for growth of SAV to levels that existed in the late 1960s.     

Suspended Matter,Chl-a,CDOM, Grain Sizes,and Optical Properties in the Arctic Fjord-Type Estuary,Kangerlussuaq, West Greenland During Summer

Optical constituents as suspended particulate matter (SPM), chlorophyll (Chl-a), colored dissolved organic matter (CDOM), and grain sizes were obtained on a transect in the arctic fjord-type estuary Kangerlussuaq (66°) in August 2007 along with optical properties. These comprised diffuse attenuation coefficient of downwelling PAR (K _d(PAR)), upwelling PAR (K _u(PAR)), particle beam attenuation coefficient (c _p), and irradiance reflectance R(−0, PAR). PAR is white light between 400 and 700 nm. The estuary receives melt water from the Greenland Inland Ice and stations covered a transect from the very high turbid melt water outlet to clear marine waters. Results showed a strong spatial variation with high values as for suspended matter concentrations, CDOM, diffuse attenuation coefficient K _d(PAR), particle beam attenuation coefficients (c _p), and reflectance R(−0, PAR) at the melt water outlet. Values of optical constituents and properties decreased with distance from the melt water outlet to a more or less constant level in central and outer part of the estuary. There was a strong correlation between inorganic suspended matter (SPMI) and diffuse attenuation coefficient K _d(PAR) (r ² = 0.92) and also for particle beam attenuation coefficient (c _p; r ² = 0.93). The obtained SPMI specific attenuation—K _d^*(PAR) = 0.13 m² g⁻¹ SPMI—and the SPMI specific particle beam attenuation—c _p^* = 0.72 m² g⁻¹—coefficients were about two times higher than average literature values. Irradiance reflectance R(−0, PAR) was comparatively high (0.09−0.20) and showed a high (r ² = 0.80) correlation with K _u(PAR). Scattering dominated relative to absorption—b(PAR)/a(PAR) = 12.3. Results strongly indicated that the high values in the optical properties were related to the very fine particle sizes (mean = 2–6 μm) of the suspended sediment. Data and results are discussed and compared to similar studies from both temperate and tropical estuaries.     

Optical Changes in a Eutrophic Estuary During Reduced Nutrient Loadings

Loss of water clarity is one of the consequences of coastal eutrophication. Efforts have therefore been made to reduce external nutrient loadings of coastal waters. This paper documents improvements to water clarity between 1985 and 2008–2009 at four stations in the microtidal estuary Roskilde Fjord and find significant relationships to freshwater nutrient loadings. The paper then investigates to which extent changes in phytoplankton biomass (chlorophyll a (Chl a)), non-algal particulate organic matter (POM*), and residual attenuation in the water (K _b), respectively, can account for this optical improvement. Vertical light attenuation (K _d) declined, on average, by 34 %, accompanying a 71 % reduction of Chl a and an 80 % reduction of POM*. Residual attenuation declined by 26 % over the period in accordance with a measured 34 % decline of dissolved organic nitrogen. Analysis of simultaneous changes in light attenuation and Secchi depth also suggested a reduction of the scatter-to-absorption ratio over time. Considering the stronger reductions of particle concentrations than dissolved organic matter, the contribution of residual attenuation to vertical attenuation increased from 54 to 74 % in 1985 to 78 to 85 % in 2008–2009. Overall, efforts to reduce nutrient loading and improve water clarity appeared to have had a larger impact on POM* than on Chl a and colored dissolved organic matter concentrations in the estuary, which can account for the decrease in the scatter-to-absorption ratio. These optical changes lead to larger improvements of Secchi depth than of vertical light attenuation. The consequence of this is an overestimation (0.45–1.48 m) of the predicted increase of potential seagrass depth limits when based on Secchi depth rather than K _d.     

Calibration of a Bio-optical Model in the North River, North Carolina (Albemarle–Pamlico Sound): A Tool to Evaluate Water Quality Impacts on Seagrasses

Seagrasses are typically light limited in many turbid estuarine systems. Light attenuation is due to water and three optically active constituents (OACs): nonalgal particulates, phytoplankton, and colored dissolved organic matter (CDOM). Using radiative transfer modeling, the inherent optical properties (IOPs) of these three OACs were linked to the light attenuation coefficient, K _PAR, which was measured in North River, North Carolina, by profiles of photosynthetically active radiation (PAR). Seagrasses in the southern portion of Albemarle-Pamlico Estuarine System (APES), the second largest estuary in the USA, were found to be light limited at depths ranging from 0.87 to 2 m. This corresponds to a range of K _PAR from 0.54 to 2.76 m^?1 measured during a 24-month monitoring program. Turbidity ranged from 2.20 to 35.55 NTU, chlorophyll a from 1.56 to 15.35 mg m^?3, and CDOM absorption at 440 nm from 0.319 to 3.554 m^?1. The IOP and water quality data were used to calibrate an existing bio-optical model, which predicted a maximum depth for seagrasses of 1.7 m using annual mean water quality values and a minimum light requirement of 22% surface PAR. The utility of this modeling approach for the management of seagrasses in the APES lies in the identification of which water quality component is most important in driving light attenuation and limiting seagrass depth distribution. The calibrated bio-optical model now enables researchers and managers alike to set water quality targets to achieve desired water column light requirement goals that can be used to set criteria for seagrass habitat protection in North Carolina.     

Long-Term Trends of Nutrients and Phytoplankton in Chesapeake Bay

Climate effects on hydrology impart high variability to water-quality properties, including nutrient loadings, concentrations, and phytoplankton biomass as chlorophyll-a (chl-a), in estuarine and coastal ecosystems. Resolving long-term trends of these properties requires that we distinguish climate effects from secular changes reflecting anthropogenic eutrophication. Here, we test the hypothesis that strong climatic contrasts leading to irregular dry and wet periods contribute significantly to interannual variability of mean annual values of water-quality properties using in situ data for Chesapeake Bay. Climate effects are quantified using annual freshwater discharge from the Susquehanna River together with a synoptic climatology for the Chesapeake Bay region based on predominant sea-level pressure patterns. Time series of water-quality properties are analyzed using historical (1945–1983) and recent (1984–2012) data for the bay adjusted for climate effects on hydrology. Contemporary monitoring by the Chesapeake Bay Program (CBP) provides data for a period since mid-1984 that is significantly impacted by anthropogenic eutrophication, while historical data back to 1945 serve as historical context for a period prior to severe impairments. The generalized additive model (GAM) and the generalized additive mixed model (GAMM) are developed for nutrient loadings and concentrations (total nitrogen—TN, nitrate?+?nitrate—NO₂?+?NO₃) at the Susquehanna River and water-quality properties in the bay proper, including dissolved nutrients (NO₂?+?NO₃, orthophosphate—PO₄), chl-a, diffuse light attenuation coefficient (K _D (PAR)), and chl-a/TN. Each statistical model consists of a sum of nonlinear functions to generate flow-adjusted time series and compute long-term trends accounting for climate effects on hydrology. We present results identifying successive periods of (1) eutrophication ca. 1945–1980 characterized by approximately doubled TN and NO₂?+?NO₃ loadings, leading to increased chl-a and associated ecosystem impairments, and (2) modest decreases of TN and NO₂?+?NO₃ loadings from 1981 to 2012, signaling a partial reversal of nutrient over-enrichment. Comparison of our findings with long-term trends of water-quality properties for a variety of estuarine and coastal ecosystems around the world reveals that trends for Chesapeake Bay are weaker than for other systems subject to strenuous management efforts, suggesting that more aggressive actions than those undertaken to date will be required to counter anthropogenic eutrophication of this valuable resource.     

Seasonal changes in the abundance and composition of plant pigments in particulate organic carbon in the lower Mississippi and Pearl Rivers

Plant pigments in particulate organic carbon were examined in the lower Mississippi and Pearl Rivers (U.S.), along with physical variables and nutrients to study seasonal changes in the abundance and composition of phytoplankton. Water samples were collected monthly from September 2001 to August 2003 in the lower Mississippi River (MR; no samples were taken in February 2002) and from August 2001 to July 2003 in the Pearl River (PR). High concentrations of total suspended solids (TSS), nutrients, and chlorophylla (chla; dominated by diatoms) were observed in the lower MR. The smaller blackwater PR was characterized by lower nutrients and chla, higher ultraviolet absorbance, and a phytoplankton biomass dominated by chlorophytes. Chla concentrations in the lower MR was high in summer low-flow periods and also during interims of winter and spring, and did not couple with physical variables and nutrients, likely due to a combination of in situ production and inputs from reservoirs, navigation locks and oxbow lakes in the upper MR and Missouri River. Chla concentrations in the PR was only high in summer low-flow periods and were controlled by temperature and concentrations of chromophoric dissolved organic matter 9CDOM). The high, diatom-dominated phytoplankton biomass in the lower MR was likely the result of decreasing TSS (increased damming in the watershed) and increasing nutrients (enhanced agricultural runoff) over the past few decades. Lower phytoplankton biomass (dominated by chlorophytes) in the PR was likely linked with intense shading by CDOM and lower availability of nutrient inputs. An increase in the relative importance of phytoplankton biomass in large turbid rivers, such as the MR, could have significant effects on the age and lability of riverine organic matter entering the ocean, the stoichiometric balance of nutrients delivered to coastal margins, and the sequestration of atmospheric CO₂ in these dynamic regions.     

A particle conveyor belt process in the Columbia River estuary: Evidence from chlorophyll<Emphasis Type="Italic">a</Emphasis> and particulate organic carbon

Using both the photosynthetically active chlorophylla (chla) content of the organic carbon fraction of suspended particulate matter (chla/POC) and the percentage of photosynthetically, active chla in fluorometrically measured chla plus pheophytina (% chla), we determined that under specified hydrodynamic conditions, neap-spring tidal differentiation in particle dynamics could be observed in the Columbia River estuary. During summer time neap tides, when river discharge was moderate, bottom chla/POC remained relatively unchanged from riverine chla/POC over the full 0–30 psu salinity range, suggesting a benign trapping environment. During summertime spring tides, bottom chla/POC decreased at mid range salinities indicating resuspension of chla-poor POC during flood-ebb transitions. Bottom % chla during neap tides tended to average higher than that during spring tides, suggesting that neap particles were more recently hydrodynamically trapped than those on the spring tides. Such differentiation supported the possibility of operation of a particle conveyor belt process, a process in which low-amplitude neap tides favor selective particle trapping in estuarine turbidity maxima (ETM)., while high-amplitude spring tides favor particle resuspension from the ETM. Untrapped river-derived particles at the surface would continue through the estuary to the coastal ocean on the neap tide; during spring tide some particles eroded from the ETM would combine with unsettled riverine particles in transit toward the ocean. Because in tensified biogeochemical activity is associated with ETM, these neap-spring differences may be critical to maintenance and renewal of populations and processes in the estuary. Very high river discharge (15, 000 m³ s⁻¹) tended to overwhelm neap-spring differences, and significant oceanic input during very low river discharge (5,000 m³ s⁻¹) tended to do the same in the estuarine channel most exposed to ocean input. During heavy springtime phytoplankton blooms, development of a thick bottom fluff layer rich in chla also appeared to negate neapspring differentiation because spring tides apparently acted to resuspend the same rich bottom material that was laid down during neap tides. When photosynthetic assimilation numbers [μgC (μgchl,a)⁻¹h⁻¹] were measured across, the full salinity range, no neap-spring differences and no river discharge effects occurred, indicating that within our suite of measurements the compositional distinction of suspended particulate material was mainly a function of chla/POC, and to a lesser extent % chla. Even though these measurements suggest the existence of a conveyor belt process, proof of actual operation of this phenomenon requires scalar flux measurements of chla properties in and out of the ETM on both neap and spring tides.     

Composition of particulate organic matter in the southern Chesapeake Bay: Sources and Reactivity

The distribution of two classes of lipid biomarker compounds (fatty acids and sterols) was used in conjunction with several bulk parameters (total suspended solids, chlorophyll a, and particulate carbon and nitrogen concentrations) to examine spatial and temporal variability in the sources of particulate organic matter (POM) important to southern Chesapeake Bay. Based on these geochemical parameters, we found that suspended and sedimentary organic matter in the southern Chesapeake Bay is derived from autochthonous sources including a mixture of fresh and detrital phytoplankton, zooplankton, and bacteria. The dominant factor contributing to temporal variability during our study was phytoplankton productivity. Enrichments in particulate organic carbon, chlorophyll a, total fatty acids, total sterols, and a number of biomarkers specific to phytoplankton sources were found in particles collected from surface (1 m) and deep (1 m above the bottom) portions of the water column at several sites during the spring bloom in March 1996 and during a localized bloom in July 1995. Comparison of sites at the mouths of two tributaries (York and Rappahannock rivers) to southern Chesapeake Bay with two sites located in the bay mainsterm indicates spatial variation in the composition of POM was not significant in this region of the bay. The energetic nature of this region of the Chesapeake Bay most likely contributes to the observed homogeneity. Comparison with biomarker studies conducted in other estuaries suggests the high levels of productivity characteristic of the Chesapeake Bay contribute to high background levels of POM.     

Sedimentation of particulate matter in the Dona Paula Bay, West Coast of India during November to May 1995–1997

Data on hydrography, nutrients, suspended particles, and sedimented particles were collected at weekly intervals from November to May during 1995 to 1997 at a station in the coastal waters of Dona Paula Bay, India. Suspended and sedimented particles were analyzed for total suspended matter (SPM), total sedimented particulate matter (TPM), particulate organic carbon (POC), particulate organic nitrogen (PON), chlorophylla (chla), and diatom abundance. Variations in hydrography and nutrients influenced the quantity and composition of sedimented particles. The TPM, POC, PON, and chla fluxes showed small-scale seasonal variations and were higher in the summer (February to May) than in the winter (November to January). Resuspension of carbon accounted for approximately 25% of the gross POC and was highest in April 1997 (45%). The mean net POC flux was 197±90 mg C m⁻² d⁻¹ and accounts for 4.6% of the TPM. The average C∶N (w∶w) ratio of the sedimented material was 13.2±6.6. The POC:chla ratio was relatively higher in the sedimented material as compared to the suspended material. The particulate carbon reaching the bottom sediment was 39% of the primary production. The low organic carbon concentration (approximately 0.1% of dry sediment) in the sediments implies that about 98% of the sedimented carbon was either consumed at the sedimentwater interface or resuspended/advected before it was finally buried into the sediments.     

Human development is linked to multiple water body impairments along the California coast

To elucidate relationships between land cover and water quality along the central California coast, we collected monthly samples from 14 coastal waterway outlets representing various degrees of human development. Sites were distributed between three salinity categories, freshwater, estuarine, and marine, to better understand land cover-water quality relationships across a range of coastal aquatic ecosystems. Samples were analyzed for fecal indicator bacteria (FIB), dissolved nutrients, stable nitrogen isotopes in particulate organic matter, and chlorophylla (chla). Sediment samples from 11 sites were analyzed for the concentration of the anthropogenic organic contaminant perfluorooctane sulfonate and its precursors (ΣPFOS). While the data indicated impairment by nutrient, microbial, and organic contaminants at both agricultural and urban sites, the percentage of agricultural land cover was the most robust indicator of impairment, showing significant correlations (p<0.05) to FIB, nutrient, chla, and ΣPFOS levels. FIB densities were strongly influenced by salinity and were highest at sites dominated by agriculture and urbanization. Nutrient levels and chla correlated to both agricultural and urban land use metrics as well. Positive correlations among FIB, nutrients, chla, and ΣPFOS suggest a synergy between microbial, nutrient, and organic pollution. The results emphasize the importance of land management in protecting coastal water bodies and human health, and identify nutrient, microbial, and organic pollution as prevalent problems in coastal California water bodies.     

Quantifying Contributions to Light Attenuation in Estuaries and Coastal Embayments: Application to Narragansett Bay,Rhode Island

In Narragansett Bay, light attenuation by total suspended sediments (TSS), colored dissolved organic matter (CDOM), and phytoplankton chlorophyll-a (chl-a) pigment is 129, 97, and 70%, respectively, of that by pure seawater. Spatial distribution of light attenuation indicates higher values in the upper Bay, where rivers with sediment and nutrient-rich waters enter and elevate TSS, CDOM, and chl-a concentrations. The temporal trends of light attenuation during the summer months (July–August) differed at various locations in the Bay, having the highest values in July. For the same period, spectral methods overestimated attenuation throughout the Bay. These findings quantify the behavior of light attenuation in space and time, providing information that can guide decisions related to improving water clarity and help understanding the effects of various environmental and management scenarios on it.     

Biogeochemical characteristics of the lower Mississippi River, USA, during June 2003

During June 2003, a period of mid level discharge (17,400 m⁻³ s⁻¹), a parcel of water in the lower Mississippi River was sampled every 2 h during its 4-d transit from river km 362 near Baton Rouge to km 0 at Head of Passes, Louisiana, United States. Properties measured at the surface during each of the 48 stations were temperature, salinity, dissolved organic carbon (DOC), total dissolved nitrogen, dissolved macronutrients (NO₃+NO₂, PO₄, Si(OH)₄), chlorophylla (chla; three size fractions: < 5 μm, 5–20 μm, and > 20 μm) pigment composition by HPLC, total suspended matter (TSM), particulate organic carbon (POC), and particulate nitrogen (PN). Air-water CO₂ flux was calculated from surface water dissolved inorganic carbon and pH. During the 4 d transit, large particles appeared to be settling out of the surface water. Concentrations of chla containing particles > 20 μm declined 37%, TSM declined 43%, POC declined 42% and PN declined 57%. Concentrations of the smaller chla containing particles did not change suggesting only large particulate materials were settling. There was no measurable loss of dissolved NO₃, PO₄, or Si(OH)₄, consistent with the observation that chla did not increase during the 4-d transit. DOC declined slightly (3%). These data indicate there was little autotrophic or heterotrophic activity in the lower Mississippi River at this time, but the system was slightly net heterotrophic.     

A decade of change in the Skidaway River estuary II. Particulate organic carbon, nitrogen, and chlorophylla

A sampling program was initiated in 1986 in the Skidaway River estuary, a tidally dominated subtropical estuary in the southeastern USA. Hydrography, nutrients, particulate organic matter (POM), and microbial and plankton abundance and composition were measured at weekly intervals at high and low tide on the same day at a single site. Hydrographic and nutrient data during 1986–1996 were given in Verity (2002); particulate organic carbon (POC), nitrogen (PON) and chlorophylla (chla) are presented here; plankton data will be presented elsewhere. Chla was fractionated into <8 μm and >8 μm size classes. All classes of POM exhibited distinct seasonal patterns superimposed upon significant long-term increases during the study period. Total chla, <8 μm chla, and >8 μm chla increased 36%, 61%, and 18%, respectively, however the fraction of total biomass attributable to small phytoplankton (<8 μm) increased 25%. The annual amplitude between minimum and maximum stock sizes increased significantly, meaning that bloom events became larger. POC and PON also increased 16% over the decade and, as observed with patterns in chla, exhibited increases in annual amplitude. The C:N ratio was typically 6.4–6.6 (wt:wt) and did not change significantly, while the annual mean C:Chla ratio decreased 19% from 165 to 140. These characteristics indicated highly labile POM composed of significant amounts of detritus, but which became increasingly autotrophic with time. Averaged over the decade, temperature explained 45–50% of the variance in POM. Nutrients were even better predictors of POM, as 60–75% of the variance in chla, POC, and PON were explained by ambient concentrations of DIN, or PO₄. Combined with significant increases in NO₃, NH₄, PO₄, Si(OH)₄, and DON during 1986–1996, these data strongly suggest that anthropogenic activities contributed to increased loading of dissolved nutrients, which became incorporated into living and nonliving particulate organic matter.     

Importance of CDOM Distribution and Photoreactivity in a Shallow Texas Estuary

This study examined freshwater discharge of dissolved organic matter (DOM) to the shallow Lavaca–Matagorda (LM) Bay estuarine system along the central Texas coast and investigated whether chromophoric DOM (CDOM) photochemical reactions have the potential to stimulate microbial activity within LM estuarine waters. Dissolved organic carbon (DOC) concentrations ranged from 3 to 10 mg C l⁻¹ and CDOM levels (reported as a ₃₀₅) ranged from 8 to 77 m⁻¹ during April and July, 2007, when the LM system was experiencing very high freshwater inputs. DOC and CDOM levels were well-correlated with salinities > 3, but exhibited considerable variability at salinities < 3. CDOM photobleaching rates (i.e., decrease in a ₃₀₅ resulting from exposure to solar radiation) for estuarine samples ranged from 0.014 to 0.021 h⁻¹, corresponding to photobleaching half-lives of 33–50 h. Our data indicate when Matagorda Bay waters photobleach; dissolved organic carbon utilization is enhanced perhaps due to enhanced microbial respiration of biologically labile photoproducts (BLPs). Net ecosystem metabolism calculations indicate that most of the LM system was net heterotrophic during our study. We estimate that BLP formation could support up to 20% of the daily microbial respiratory C demand in LM surface waters and combined with direct photochemical oxygen consumption could have an important influence on O₂ cycles in the LM system.     

Spectral Irradiance and Phytoplankton Community Composition in a Blackwater-Dominated Estuary,Winyah Bay,South Carolina,USA

We investigated spatial and temporal relationships between spectral irradiance and phytoplankton community composition in the blackwater-influenced estuary Winyah Bay, South Carolina. Upstream, high concentrations of chromophoric dissolved organic matter (CDOM) absorbed blue wavelengths, resulting in a predominantly red light field. Green light prevailed downstream near the lower-CDOM coastal ocean, and phytoplankton community composition was distinct from upstream and mid-estuarine communities. Diatoms were abundant throughout the estuary in January, August, and October, cryptophytes dominated in July, and chlorophytes were abundant in December 2006. Only diatoms and chlorophytes showed significant covariation with the spectral attenuation coefficient (k(λ)): Chlorophytes showed positive relationships with k(442) (blue light) while diatoms were negatively correlated with k(442) and k(490) (violet to blue). Phytoplankton community composition in Winyah Bay appears to be driven by strong horizontal flow rather than gradients in spectral irradiance, but results indicate that water color is likely to play a greater role in blackwater-influenced estuaries with longer residence times.