Reproductive success of Calanus pacificus during diatom blooms in Dabob Bay, Washington

While numerous laboratory studies in the last decade have shown that diatoms can induce reproductive failure in copepods, field evidence for a negative diatom effect is equivocal. To unambiguously elucidate the effects diatoms have on copepod reproduction in situ, we undertook a study of the abundance, distribution, grazing rates, and reproductive success of Calanus pacificus in Dabob Bay, Washington, USA, during two spring bloom periods. We simultaneously measured the phytoplankton composition, abundance, and distribution. Here we present results for the reproductive success of C. pacificus using four measurements: egg production rate, clutch size, egg hatching success, and naupliar survival (to the first feeding stage). Egg production rate was positively correlated with chlorophyll a concentration, and egg hatching success and naupliar survival were usually greater than 80%. However, in February 2002 and 2003 – during blooms of diatoms of the genus Thalassiosira – either egg hatching success, naupliar survival, or both were significantly depressed compared to other times in spring and summer. These effects, combined with evidence that C. pacificus was grazing aldehyde-producing Thalassiosira at the time of their blooms, indicate that diatoms can negatively affect copepod reproduction in the field, albeit only under specific circumstances and for brief periods.     

The balance between microzooplankton grazing and phytoplankton growth in a highly productive estuarine fjord

During 24, three-day cruises to Dabob Bay, Washington State, USA, from February 4 to April 26, 2002, and February 4 to May 1 2003, we examined the relative growth and grazing rates of phytoplankton and microzooplankton using dilution experiments. Experiments were conducted over two time intervals: 8–10 h during the nighttime only, or 24 h from noon to noon. We used water from two depths during each cruise: from the surface mixed layer, and from a deep layer below the seasonal thermocline. During 2002, there was one mid-sized bloom consisting mainly of Thalassiosira spp. in early February, and a larger bloom in April comprised of two Chaetoceros spp. and Phaeocystis sp. During 2003, there were also two blooms, one in early February, which was again dominated by Thalassiosira spp., and a second larger bloom in mid-April, comprised mainly of Thalassiosira spp. and Chaetoceros spp. During all four of these blooms, and for both water source depths, specific grazing rates of microzooplankton were most often as high or higher than the calculated phytoplankton specific growth rates. The major microzooplankton categories that could have accounted for this were (1) a large Gyrodinium spp., (2) a group of fusiform-shaped mid-sized Protoperidinium species, and (3) three loosely defined taxonomic groups consisting of naked ciliates, tintinnids, and unidentified heterotrophic dinoflagellates. Based on our measurements, it appears that the microzooplankton community grazing pressure can often exert significant control on phytoplankton biomass, even during the extremely productive spring bloom periods and under several different diatom-dominated bloom types. These results suggest that even in highly productive estuarine ecosystems, which are often nurseries to economically important fisheries species, microzooplankton play a critical role and may significantly alter the availability and efficiency of transfer of energy to higher trophic levels.     

Copepod grazing during spring blooms: Does Calanus pacificus avoid harmful diatoms?

During late winter and spring of 2002 and 2003, 24, 2–3 day cruises were conducted to Dabob Bay, Washington State, USA, to examine the grazing, egg production, and hatching success rates of adult female Calanus pacificus and Pseudocalanus newmani. The results of the copepod grazing experiments for C. pacificus are discussed here. Each week, copepod grazing incubation experiments from two different depth layers were conducted. Grazing was measured by both changes in chlorophyll concentration and cell counts. In 2002, there was one moderate bloom consisting mainly of Thalassiosira spp. in early February, and a larger bloom in April comprised of two Chaetoceros species and Phaeocystis sp. Similarly, in 2003, there were two blooms, an early one dominated by Thalassiosira spp., and a later one consisting of Chaetoceros spp. and Thalassiosira spp. Clearance rates on individual prey species, as calculated by cell counts, showed that C. pacificus are highly selective in their feeding, and may have much higher clearance rates on individual taxa than rates calculated from bulk chlorophyll disappearance. During weeks of high phytoplankton concentration, the copepods generally ate phytoplankton. However, they often rejected the most abundant phytoplankton species, particularly certain Thalassiosira spp., even though the rejected prey were often of the same genus and similar size to the preferred prey. It is speculated that this avoidance may be related to the possible deleterious effects that certain of these diatom species have on the reproductive success of these copepods. During weeks of medium to low phytoplankton concentration, the copepods selectively ate certain species of phytoplankton, and often had high electivity for microzooplankton. The selection mechanism must consist of active particle rejection most likely based on detection of surface chemical properties, since the diatoms that were selected were of the same genus, nearly the same size, and at lower numerical abundance than those cells that were avoided. The grazing choices made by these copepods may have important consequences for the overall ecosystem function within coastal and estuarine systems through changes in the transfer efficiency of energy to higher trophic levels.     

Copepod grazing during spring blooms: Can Pseudocalanus newmani induce trophic cascades?

During late winter and spring of 2002 and 2003, 24 two- to three-day cruises were conducted to Dabob Bay, Washington State, USA, to examine the grazing, egg production, and hatching success rates of adult female Calanus pacificus and Pseudocalanus newmani. Here, we discuss the results of our grazing experiments for P. newmani. Each week, we conducted traditional microzooplankton dilution experiments and “copepod dilution” experiments, each from two different layers. Grazing was measured by changes in chlorophyll concentration and direct cell counts. Clearance rates on individual prey species, as calculated by cell counts, showed that Pseudocalanus are highly selective in their feeding, and may have much higher grazing rates on individual taxa than calculated from bulk chlorophyll disappearance. The grazing rates of the copepods, however, are typically an order of magnitude lower than the grazing rates of the microzooplankton community, or the growth rates of the phytoplankton. P. newmani ingested diatoms, but, at certain times fed preferentially on microzooplankton, such as ciliates, tintinnids, and larger dinoflagellates. Removal of the microzooplankton may have released the other phytoplankton species from grazing pressure, allowing those species’ abundance to increase, which was measured as an apparent “negative” grazing on those phytoplankton species. The net result of grazing on some phytoplankton species, while simultaneously releasing others from grazing pressure resulted in bulk chlorophyll-derived estimates of grazing which were essentially zero or slightly negative; thus bulk chlorophyll disappearance is a poor indicator of copepod grazing. Whether copepods can significantly release phytoplankton from the grazing pressure by microzooplankton in situ, thus causing a trophic cascade, remains to be verified, but is suggested by our study.     

Responses of the chaetognath, Sagitta elegans, and larval Pacific hake, Merluccius productus, to spring diatom and copepod blooms in a temperate fjord (Dabob Bay, Washington)

As part of a broader field study examining the potentially deleterious effects of diatoms on planktonic food webs, we examined the abundance, stage composition, diet, and feeding success of the chaetognath, Sagitta elegans, and the abundance and morphometric condition of larval Pacific hake, Merluccius productus. Our objective was to look for a relationship between spring phytoplankton blooms and planktonic predators, as mediated by their copepod prey, with special reference to possible deleterious effects of diatoms. Zooplankton were collected weekly during February–May and in mid-summer of 2002 and 2003 in Dabob Bay, Washington State, USA. S. elegans abundance was high in summer of both years and was higher in spring 2003 than spring 2002. Larval chaetognaths dominated the population in early spring and remained present throughout sampling. S. elegans consumed mostly copepods. The abundance of larval S. elegans was correlated with the abundance of copepodites, although no relationship between chaetognath feeding success and prey abundance was found. Larval Pacific hake abundance was high (1200 larvae per square meter) in late February and early March of 2002 and 2003 and decreased rapidly in late spring. The morphometric condition of M. productus was not significantly related to copepod abundance. These results indicate that any deleterious effects of diatoms on copepod abundance, at the scale seen during spring 2002 and 2003 in Dabob Bay, did not greatly affect the next higher trophic level.     

Biological components of Ross Sea short-term particle fluxes in the austral summer of 1995–1996

The Ross Sea, a region of high seasonal production in the Southern Ocean, is characterized by blooms of the haptophyte Phaeocystis antarctica and of diatoms. The different morphology, structural composition and consumption of these two phytoplankton by grazing zooplankton may result in different carbon cycling dynamics and carbon flux from the euphotic zone. We sampled short-term (2 days) particle flux at 5 sites from 177.6°W to 165°E along a transect at 76.5°S with traps placed below the euphotic zone at 200 m during December 1995–January 1996. We estimated carbon flux of as many eucaryotic organisms and fecal pellets as possible using microscopy for counts and measurements and applying volume:carbon conversions from the literature. Eucaryotic organisms contributed about 20–40% of the total organic carbon flux in both the central Ross Sea polynya and in the western polynya, and groups of organisms differed in contribution to the carbon flux at the different sites. Algal carbon flux ranged from 4.5 to 21.1 mg C m⁻² day⁻¹ and consisted primarily of P. antarctica (cell plus mucus) and diatom carbon at all sites. Different diatom species dominated the diatom flux at different sites. Carbon fluxes of small pennate diatoms may have been enhanced by scavenging, by sinking senescent P. antarctica colonies. Heterotrophic carbon flux ranged from 9.2 to 37.6 mg C m⁻² day⁻¹ and was dominated by athecate heterotrophic dinoflagellate carbon in general and by carbon flux of a particular large athecate dinoflagellate at two sites. Fecal pellet carbon flux ranged from 4.6 to 54.5 mg C m⁻² day⁻¹ and was dominated by carbon from ovoid/angular pellets at most sites. Analysis of fecal pellet contents suggested that large protozoans identified by light microscopy contributed to ovoid/angular fecal pellet fluxes. Carbon flux as a percentage of daily primary production was lowest at sites where P. antarctica predominated in the water column and was highest at sites where fecal pellet flux was highest. This indicates the importance of grazers in carbon export.     

Responses of diatoms to iron-enrichment (SEEDS) in the western subarctic Pacific, temporal and spatial comparisons

Phytoplankton species composition was analyzed inside and outside of the iron-enriched patch during the SEEDS experiment. Before the iron-enrichment, the phytoplankton community consisted of similar proportions of pico-, nano- and micro-sized phytoplankton, and the micro-phytoplankton was dominated by the pennate diatom Pseudo-nitzschia turgidula. Although all the diatoms, except the nano-sized Fragilariopsis sp., increased during the two weeks of the observation period, the flora in the patch dramatically changed with the increase of phytoplankton biomass to a centric diatom-dominated community. Neritic diatoms, especially Chaetoceros debilis, showed higher growth rates than other diatoms, without any delay in the initiation of growth after the enrichment, and accounted for 90% of the micro-phytoplankton after day 9. In contrast, the oceanic diatoms showed distinct delays in the initiation of growth. We conclude that the responses of the diatoms to the manipulation of iron concentration were different by species, and the fast and intensive response of the phytoplankton to iron-enrichment resulted from the presence of a small amount of neritic diatoms at the study site. The important factors that determine the dominant species in the bloom are the potential growth rates under an iron-replete condition and the growth lag. Abundant species in the patch are widely distributed in the North Pacific and their relative contributions in the Oyashio area and at Stn KNOT are high from spring to summer. However, a characteristic difference of species composition between the SEEDS bloom and natural blooms was the lack of Thalassiosira and Coscinodiscus species in the patch, which usually account for a major part of the phytoplankton community under blooming conditions in the western North Pacific.     

Seasonal variations in dissolved organic carbon concentrations and characteristics in a shallow coastal bay

Dissolved organic matter (DOM) composition and dynamics in temperate shallow coastal bays are not well described although these bays may be important as local sources of organic carbon to ocean waters and are often sites of economically-important fisheries and aquaculture. In this study surface water samples were collected on a monthly to bi-monthly basis over two years from a mid-Atlantic coastal bay (Chincoteague Bay, Virginia and Maryland, USA). Dissolved organic carbon (DOC) concentrations and light absorbance characteristics were measured on sterile-filtered water, and high-molecular weight (> 1 kDa) dissolved OM (DOM) was isolated to determine stable isotope composition and molecular-level characteristics. Our time series encompassed both a drought year (2002) and a year of above-average rainfall (2003). During the dry year, one of our sites developed a very intense bloom of the brown tide organism Aureococcus anophagefferens while during the wet year there were brown tide bloom events at both of our sampling sites. During early spring of the wet year, there were higher concentrations of > 1 kDa DOC; this fraction represented a larger proportion of overall DOC and appeared considerably more allochthonous. Based upon colored dissolved organic matter (CDOM) and high-molecular weight DOM analyses, the development of extensive phytoplankton blooms during our sampling period significantly altered the quality of the DOM. Throughout both years Chincoteague Bay had high DOC concentrations relative to values reported for the coastal ocean. This observation, in conjunction with the observed effects of phytoplankton blooms on DOM composition, indicates that Chincoteague Bay may be a significant local source of “recently-fixed” organic carbon to shelf waters. Estimating inputs of DOC from Chincoteague Bay to the Mid-Atlantic Bight suggests that shallow productive bays should be considered in studies of organic carbon on continental shelves.     

Germination of phytoplankton resting cells from surface sediments in two areas of the Southern Chinese coastal waters

To understand the role of phytoplankton resting cells in the outbreak of algal blooms, particularly harmful algal blooms, surface sediments were collected monthly from April 2007 to March 2008 from two bays near the international ports in the Southern Chinese coastal waters. Sieved sediments were incubated for 20 and 40 days, and germinated vegetative cells were observed. Altogether, 97 taxa were recorded, of which 50 were diatoms and 35 dinoflagellates. Vegetative cells of cyanobacteria, chlorophytes, dictyophytes, euglenophytes, haptophytes, and raphidophytes were also observed. Centric diatoms such as Chaetoceros, Melosira, Skeletonema, and Thalassiosira dominated. Scrippsiella, Gymnodinium, and Alexandrium were common dinoflagellate taxa. Diatom spores germinated in samples from all seasons but were abundant in the autumn and winter samples. Low numbers of dinoflagellate cells germinated in the winter samples. The nanophytoplankton taxa, Gymnodinium corii and Chrysochromulina sp., which have not been recorded in the previous phytoplankton surveys, were abundant, suggesting either their new appearance in the water column or perhaps that they were overlooked in routine phytoplankton monitoring due to their small sizes. Vegetative cells of harmful or potentially harmful taxa were germinated, and some of them such as Amphidinium, Gambierdiscus, Ostreopsis, and Coolia have not previously been reported in the study area. Based on the results of the incubation of sediments from the two bays near the international ports, it is suggested that international shipping increases the risk of the introduction of new phytoplankton species and thus promotes the incidence of harmful algal blooms.     

Diel fluctuations in dissolved free amino acids and monosaccharides in Chesapeake Bay dinoflagellate blooms

The accumulation of phytoplankton biomass in recurring summer dinoflagellate blooms of Chesapeake Bay is accompanied by large pools of dissolved organic matter (DOM). Two fractions of the DOM, free amino acids (DFAA) and monosaccharides (MONO), were measured at 3 h intervals in mixed species dinoflagellate blooms (Katodinium rotundatum, Gymnodinium spp.) and related to productivity, biomass and photoperiod. Peak chlorophyll levels for the three blooms were 28, 65 and 938 μg1⁻¹. In general, DFAA and MONO concentrations increased with increasing biomass of bloom-forming species, reaching 203 and 844 μg1⁻¹. MONO appeared to accumulate during the day while there was no consistent pattern for DFAA. The accumulations of DFAA and MONO in blooms indicate that bloom production might stimulate microheterotrophy, thereby enhancing carbon and nutrient cycling in bloom-impacted regions.     

Low reproductive success for copepods during a bloom of the non‐aldehyde‐producing diatom Cerataulina pelagica in the North Adriatic Sea

Egg production rates and/or hatching success in the copepods Acartia clausi, Calanus helgolandicus and Temora longicornis were negatively affected by a late spring (May–June 2003) phytoplankton bloom in the North Adriatic Sea, dominated mainly by the large diatom Cerataulina pelagica. Highest total concentrations of 3.3·10⁴ cells·ml^?1 were located in the vicinity of the Po River, which also corresponded to the area where the highest numbers of phaeophorbides were measured (0.779, 0.528 and 0.419 μg·l^?1, respectively, compared to an average of the remaining stations of 0.183 ± 0.049 SD), suggesting some grazing on the bloom. Phytoplankton biomass in terms of carbon was dominated by diatoms, representing on average 42% of total phytoplankton carbon and more than 80% at several stations. Cerataulina pelagica, Cyclotella spp., Chaetoceros spp. and small unidentified centric diatoms dominated the diatom community numerically but C. pelagica was by far the dominant diatom in terms of carbon due to its large cell size. This species represented more than 60% of the diatom biomass at nine of the 14 stations sampled, and was absent only at one station, which was the most offshore station sampled during the cruise. Although polyunsaturated aldehydes (PUAs) were not detected, other oxylipins which are hydroxy and keto derivatives of eicosapentaenoic and docosahexaenoic acids that affect copepod reproduction were found in these samples. Hence, we can attribute the negative impact of diatoms not only to PUAs, as previously believed, but also to these compounds. This is the first direct evidence of the presence of oxylipins other than PUAs in marine blooms dominated by diatoms.     

中国海洋浮游植物和赤潮物种的生物多样性研究进展(四):长江口

长江口海域是我国的一个典型水域,具有很高的浮游植物物种多样性,其中包括很多种赤潮物种,引起赤潮频发。本文总结了过去40年间长江口海域历次航次调查的研究结果,比较分析了52个航次调查鉴定的浮游植物组成,重点探索了赤潮物种的组成,并详细描述了长江口海域的6种典型赤潮物种:中肋骨条藻、东海原甲藻、旋链角毛藻、夜光藻、米氏凯伦藻和尖刺拟菱形藻。在文献报道的657个浮游植物物种(包括571个物种和86个鉴定到属的未定种)中,硅藻(368个物种和55个未定种)和甲藻(149个物种和15未定种)占绝大多数。这些浮游植物中赤潮物种占125个,包括硅藻69种、甲藻49种、金藻2种、隐藻1种和蓝藻3种。本文为比较研究不同海域赤潮物种的生物多样性,探讨生物多样性的起源与演化,为解读宏基因组学及宏条形码分析结果提供了基础。     

The phytoplankton bloom response to wind events and upwelled nutrients during the CoOP WEST study

In the coastal waters off northern California, seasonal wind-driven upwelling supplies abundant nutrients to be processed by phytoplankton productivity. As part of the Coastal Ocean Processes: Wind Events and Shelf Transport (CoOP WEST) study, nutrients, CO₂, size-fractionated chlorophyll, and phytoplankton community structure were measured in the upwelling region off Bodega Bay, CA, during May–June 2000, 2001 and 2002. The ability of this ecosystem to assimilate nitrate (NO₃) and silicic acid/silicate (Si(OH)₄) and accumulate particulate material (i.e. phytoplankton) was realized in all 3 years, following short events of upwelling-favorable winds, followed by periods of relaxed winds. This was observed as phytoplankton blooms, dominated by chlorophyll in cells greater than 5 μm in diameter, that reduced the ambient nutrients to zero. These communities were located over the near-shore shelf (<100 m depth) and were dominated by diatoms. An optimal window of 3–7 days of relaxed winds, following an upwelling pulse, was required for chlorophyll accumulation. The large-celled phytoplankton that result are likely important players in coastal new production and carbon cycling.     

Seasonal succession of cyanoprokaryotes in a hypereutrophic oligo-mesohaline lagoon from the South of France

The Bolmon lagoon (South of France) is an oligo-mesohaline coastal lagoon that has undergone intense eutrophication in the past decades, resulting from a strong concentration of human activities in its drainage basin. Consequently, it exhibits some characteristics typical of an advanced trophic state; namely, the disappearance of submerged vegetation, the permanently intense phytoplankton growth and the recurrence of cyanoprokaryote blooms. As cyanoprokaryote dominance in south-temperate saline lagoons is little reported, we carried out this study in order to understand the seasonal variations in the phytoplankton composition and biomass, and to analyse the influence of environmental parameters such as salinity, nutrients and climate on the seasonal succession of species. In this lagoon, the phytoplankton was permanently dominated by cyanoprokaryotes, probably because of high availability of nutrients, low light penetration in the water column and frequent turbulent mixing induced by wind. The two most abundant species Planktothrix agardhii (in winter–spring) and Pseudanabaena limnetica (in summer) have low light requirements and are well adapted to a high mixing frequency, which defines the S1 functional group in Reynolds' typology for phytoplankton. Although widely studied in north-temperate lakes, blooms of these typically freshwater species are almost unreported in the Mediterranean area, especially in brackish ecosystems that are not their normal habitat. In the Bolmon lagoon, all their requirements for nutrients, light and mixing are satisfied and they seem to cope with a moderate presence of salt but P. agardhii was less competitive than P. limnetica at highest salinities, the latter being probably more halophytic. Contrary to the observations in lakes located at higher latitudes, the Mediterranean climate seems to induce a typical seasonal pattern of succession characterised by the dominance of P. agardhii (winter) – Chroococcales (spring) – Pseudanabaenaceae (summer) – P. agardhii (autumn, winter). The warm temperatures seemed to have a major influence on the phytoplankton succession, being responsible for the survival of Planktothrix during winter and its rapid and intense development in early spring. Intense mixing and high irradiance in summer promoted the development of Pseudanabaenaceae, as reported in another south-temperate lagoon, the Albufera of Valencia (Spain). The ecological success of Oscillatoriales observed in the Bolmon lagoon is a perfect example of a shift to the “turbid stable state” as proposed for freshwater shallow lakes only. Our work demonstrated that hypereutrophic Mediterranean lagoons can function very similarly to shallow lakes at higher latitudes; but the warmer climate and higher irradiances are probably responsible for differences in the seasonal pattern of species dominance.     

Population dynamics of phytoplankton, heterotrophic bacteria, and viruses during the spring bloom in the western subarctic Pacific

We characterized the community composition of phytoplankton in the western subarctic Pacific from the pre-bloom to the decline phase of the spring bloom with special reference to decreases in the silicic acid concentration in surface waters as an index for diatom bloom development. Furthermore, responses of heterotrophic bacteria and viruses to the spring bloom were also concomitantly investigated. Under pre-bloom conditions when nutrients were abundant but the surface mixed layer depth was relatively deep, chlorophyll (Chl) a concentrations were consistently low and green algae (chlorophytes and prasinophytes), cryptophytes, and diatoms were predominant in the phytoplankton assemblages as estimated by algal pigment signatures. Together with the shallowing of the mixed layer depth and the decrease in silicic acid concentration, diatoms bloomed remarkably in the Oyashio region, though the magnitude of the bloom in the Kuroshio-Oyashio transition (hereafter Transition) region was relatively small. A total of 77 diatom species were identified, with the bloom-forming diatoms mainly consisting of Thalassiosira, Chaetoceros, and Fragilariopsis species. It has become evident that the carotenoid fucoxanthin can serve as a strong indicator of the diatom carbon biomass during the spring diatom bloom. Differences in the species richness of diatoms among stations generally enabled us to separate the Oyashio bloom stations from the Transition and the Oyashio pre-bloom stations. Relatively high values of the Shannon-Wiener index for the diatom species were also maintained during the Oyashio bloom, indicating that a wide variety of species then shared dominance. In the decline phase of the Oyashio bloom when surface nutrient concentrations decreased, senescent diatom cells increased, as inferred from the levels of chlorophyllide a. Although the cell density of heterotrophic bacteria changed little with the development of the diatom bloom, viral abundance increased toward the end of the bloom, suggesting an increased likelihood of mortality among organisms including diatoms resulting from viral infection. This is the first report on the microbial trophodynamics, including viruses, during the spring diatom bloom in the western subarctic Pacific.     

中国海洋浮游植物和赤潮物种的生物多样性研究进展(三):南海

中国南海是世界上最大的边缘海之一,位于印太交汇区的北端。独特的地理环境和气候条件使其生态环境极其复杂,使得南海海域的赤潮具有特殊性和典型性。近20年来,南海赤潮现象呈攀升态势,对水产养殖业、滨海旅游业、海洋生态系统及人类健康都有着严重的危害。为了系统了解南海海域浮游植物,尤其是赤潮物种的种类组成、相对丰度及年际变化,本文对近30年间(1987—2018)南海海域涉及浮游植物调研的44个航次数据进行了统计和比较分析,共记录到500种浮游植物、65个鉴定到属的未定种和1个未定类的三深碎裂藻。其中,硅藻(289种和37个未定种)和甲藻(186种和21个未定种)占绝大多数,包括赤潮物种149种。其中大部分浮游植物尚未得到系统的分子鉴定。比较发现不同航次报道的物种数目相差较大,种类相似度不高,硅藻和甲藻的相对优势地位无明显演替现象。南海海域最常见的赤潮物种以硅藻为主,包括菱形海线藻、中肋骨条藻、洛氏角毛藻、尖刺拟菱形藻、柔弱拟菱形藻、球形棕囊藻、夜光藻和锥状斯氏藻。本文将为比较研究不同海域赤潮物种的生物多样性,解读宏基因组学及宏条形码分析结果提供参考。     

印度尼西亚北部苏拉维斯蓝碧海峡2012-2015年东南季风期间浮游植物的变化

2013年4月，2014年5月，2012年6月和2015年10月在印度尼西亚北部苏拉维斯蓝碧海峡（Lembeh Strait）进行了4个航次的海洋生态调查，研究了蓝碧海峡的浮游植物种类组成，以及浮游植物群落结构的季节变化及其驱动因子。四个航次的调查中记录了5类浮游植物和416个种（类）。调查区浮游植物密度平均为2348cells/L，硅藻和甲藻种类最多。蓝藻种类最少，但丰度很高。季风转换期的4月份和10月份浮游植物丰度总量较低，东南季风期间5月份和6月份的浮游植物丰度较高。除了束毛藻（Trichodesmium）之外，常见种是浮游硅藻。浮游植物的丰度和多样性的季节性变化明显。海链藻（Thalassionema）、拟菱形藻（Pseudo-nitzschia）和蓝藻类的束毛藻对群落的不相似性贡献最大。由于蓝碧海峡南部营养盐浓度较高，南部水域的硅藻和甲藻密度稍高于海峡北部。虽然，南北两个水体中蓝藻的分布趋于均匀，但蓝碧海峡南部也有较高密度。与雅加达湾以及中国的一些海湾相比，蓝碧海峡的浮游植物丰度相当低。分析表明，SE季风期间上升流营养盐是左右浮游植物丰度月变化的重要因素。蓝碧海峡浮游生态系原始，且接近天然本底，人类活动背景噪声低，能够清晰地响应大环境的变化，是研究浮游生态系统的理想区域。     

Seasonal variability of living benthic foraminifera from the outer continental shelf of the Bay of Biscay

Living benthic foraminiferal faunas of six stations from the continental shelf of the Bay of Biscay have been investigated during three successive seasons (spring, summer and autumn 2002). For the three investigated stations, bottom water oxygen concentration, oxygen penetration into the sediment and sediment organic carbon contents are all relatively similar. Therefore, we think that the density and the composition of the foraminiferal faunas is mainly controlled by the quantity and quality of organic input resulting from a succession of phytoplankton bloom events, occurring from late February to early September. The earliest blooms are positioned at the shelf break, late spring and early summer blooms occur off Brittany, whereas in late summer and early autumn, only coastal blooms appear, often in the vicinity of river outlets. In spring, the benthic foraminiferal faunas of central (B, C and D) and outer (E) continental shelf stations are characterised by strong dominance in the first area and strong presence in the second area of Nonionella iridea. In fact, station E does not serve as a major depocenter for the remains of phytoplankton blooms. If station E is not considered, the densities of this taxon show a clear gradient from the shelf-break, where the species dominates the assemblages, to the coast, where it attains very low densities. We explain this gradient as a response to the presence, in early spring, of an important phytoplankton bloom, mainly composed of coccolithophorids, over the shelf break. This observation is supported by the maximum particles flux values at stations close to the shelf break (18.5 g m^− 2 h^− 1) and lower values in a station closer to the coast (6.8 g m^− 2 h^− 1). In summer, the faunal density is maximum at station A, relatively close to more varied phytoplancton blooms that occur off Brittany until early June. We suggest that the dominant species, Nonion fabum, Cassidulina carinata and Bolivina ex. gr. dilatata respond to phytodetritus input from these blooms. In autumn, the rich faunas of inner shelf station G are dominated by N. fabum, B. ex. gr. dilatata, Hyalinea balthica and Nonionella turgida. These taxa seem to be correlated with the presence of coastal blooms phenomena, in front of river outlets. They may be favoured by an organic input with a significant contribution of terrestrial, rather low quality organic matter.     

Alkaline phosphatase activity of water column fractions and seagrass in a tropical carbonate estuary, Florida Bay

Few phosphorus-depleted coastal ecosystems have been examined for their ability to hydrolyze phosphomonoesters. We examined seasonal (August 2006–April 2007) alkaline phosphatase activity in Florida Bay, a phosphorus-limited shallow estuary, using fluorescent substrate at low concentrations (≤2.0 μM). In situ dissolved inorganic and organic phosphorus levels and phosphomonoester concentrations were also determined. Water column alkaline phosphatase activity was partitioned into two particulate size fractions (>1.2 and 0.2–1.2 μm) and freely dissolved enzymes (<0.2 μm). Water column alkaline phosphatase activity was also compared to leaf and epiphyte activity of the dominant tropical seagrass Thalassia testudinum. Our results indicate: (1) potential alkaline phosphatase activity in Florida Bay is high compared to other marine ecosystems, resulting in rapid phosphomonoester turnover times (2 h). (2) Water column alkaline phosphatase activity dominates, and is split equally between particulate and dissolved fractions. (3) Alkaline phosphatase activity was highest during cyanobacterial blooms, but not when normalized to chl a. These results suggest that dissolved, heterotrophic and autotrophic alkaline phosphatase activity is stimulated by phytoplankton blooms. (4) The dissolved alkaline phosphatase activity is relatively constant, while the particulate activity is seasonally and spatially dynamic, typically associated with phytoplankton blooms. (5) Phosphomonoester concentrations throughout the bay are low, even though potential hydrolysis rates are high. We propose that bioavailable dissolved organic P is hydrolyzed by dissolved and microbial alkaline phosphatase enzymes in Florida Bay. High alkaline phosphatase activity in the bay is also promoted by long hydraulic residence times. This background activity is primarily driven by carbon and phosphorus limitation of microorganisms, and regeneration of enzymes associated with cell lysis. Pulses of inorganic phosphorus and labile organic phosphorus and nitrogen may stimulate autotrophs, particularly cyanobacteria, which in turn promote biological activity that increase alkaline phosphatase activity of both autotrophs and heterotrophs in the bay.     

Satellite-derived measurements of spatial and temporal chlorophyll-a variability in Funka Bay, southwestern Hokkaido, Japan

Chlorophyll-a (chl-a) concentration has an important economic effect in coastal and marine environments on fisheries resources and marine aquaculture development. Monthly climatologies the Sea-viewing Wide Field-of-view Sensor (SeaWiFS) derived chl-a from February 1998 to August 2004 around Funka Bay were used to investigate the spatial and temporal variability of chl-a concentrations. SeaWiFS-derived suspended sediment, MODIS derived sea surface temperature (SST), solar radiation and wind data were also analyzed. Results showed two distinct chlorophyll blooms in spring and autumn. Chl-a concentrations were relatively low (<0.3 mg m⁻³) in the bay during summer, with high concentrations occurring along the coast, particularly near Yakumo and Shiraoi. In spring, chl-a concentrations increased, and a large (>2 mg m⁻³) phytoplankton bloom occurred. The spatial and temporal patterns were further confirmed by empirical orthogonal function (EOF) analysis. About 83.94% of the variability could be explained by the first three modes. The first chl-a mode (77.93% of the total variance) explained the general seasonal cycle and quantified interannual variability in the bay. The spring condition was explained by the second mode (3.89% of the total variance), while the third mode (2.12% of the total variance) was associated with autumn condition. Local forcing such as the timing of intrusion of Oyashio water, wind condition and surface heating are the mechanisms that controlled the spatial and temporal variations of chlorophyll concentrations. Moreover, the variation of chlorophyll concentration along the coast seemed to be influenced by suspended sediment caused by resuspension or river discharge.