Trophic pathways and carbon flux patterns in the Laptev Sea

The Laptev Sea is a high-Arctic epicontinental sea north of Siberia (Russia) that is one of the least understood regions of the world’s ocean. It is characterized by a shallow and broad shelf plateau, high influx of river water, sediments and nutrients during summer, long-lasting sea-ice cover from October to May, and the formation of a narrow flaw-lead polynya off the fast-ice edge during winter.Here, we describe results of a German–Russian research project (1993-present), presenting the distribution patterns and dynamics of its marine flora and fauna, as well as pathways and processes of coupling between sea-ice, water-column and sea-floor biota.Three ecological zones are distinguished along a combined east–west and Lena-impact gradient, differing in the composition of pelagic and benthic communities. In general, high Chl a concentrations in the sediments indicate a tight coupling between sympagic and pelagic primary production and nutrient supply to the benthos throughout the entire Laptev Sea. However, there were pronounced regional differences between the ecological zones in magnitude of primary production and trophic dynamics. Primary production during the ice-free summer was highest in the estuarine zone most strongly influenced by the Lena River (210 mg C m⁻² day⁻¹). The western and northeastern Laptev Sea yielded 55 and 95 mg C m⁻² day⁻¹, respectively. Moreover, the zones differed in the partitioning of carbon flux between zooplankton and benthic food webs. In the Lena zone zooplankton carbon demand was about 31 mg C m⁻² day⁻¹ whereas in the western zone it was 21 mg C m⁻² day⁻¹ and in the eastern zone 4 mg C m⁻² day⁻¹. Total benthic carbon demand was 32 mg C m⁻² day⁻¹ for the Lena zone, 56 mg C m⁻² day⁻¹ in the western zone and 100 mg C m⁻² day⁻¹ in the northeastern zone.A carbon budget constructed for the Laptev Sea indicates that (1) a high proportion of primary production is channelled through the benthic trophic web, bypassing the pelagic trophic web, and (2) autochthonous primary production in the northeastern and western Laptev Sea might not be sufficient to fuel both pelagic and benthic secondary production and, hence, input of allochthonous organic carbon is required to balance the overall carbon demand.     

A comparative study of microalgal production in a marine versus a river-dominated temporarily open/closed estuary, South Africa

Temporarily open/closed estuaries (TOCEs) account for almost 71% of the total number of South African estuarine systems. To date the dynamics of microalgal production and biomass in TOCEs is poorly understood. A survey was therefore conducted in two TOCEs along the KwaZulu-Natal coast: the river-dominated Mdloti and the marine-dominated Mpenjati. The aims of this investigation were: (1) to compare the variability of benthic and pelagic microalgal production and biomass in these two contrasting systems; (2) to determine the key environmental parameters influencing primary production in these TOCEs. Results show a similar pattern of primary production and biomass in both estuaries. High benthic microalgal biomass with low primary production and low phytoplankton biomass with high rates of pelagic primary production were observed in both estuaries. Possible explanations for this include: (a) optimum light conditions in the water column, compared to the sediment surface; (b) high impact of grazing by zooplankton in the water column; and (c) settling of phytoplankton. Significant correlations were observed between primary production and environmental parameters (K_d, PAR, temperature, DIN and DIP), during the open and closed phases of both estuaries. A BIOENV (PRIMER) analysis showed that patterns of primary production in both estuaries were influenced primarily by interactions of multiple independent parameters. Comparisons between measured hourly pelagic primary production rates at the Mpenjati and Mdloti and the composite parameter (P_c) of Cole and Cloern (1987) revealed highly significant relationships (r² = 0.8; p < 0.001) between these differently derived variables.     

Microalgal productivity in an estuarine lake during a drought cycle: The St. Lucia Estuary,South Africa

The St. Lucia estuarine lake on the north coast of KwaZulu-Natal, South Africa, is one of the largest estuarine systems in Africa and of unique importance for the adjacent marine and terrestrial ecosystems. The area regularly experiences periods of drought, resulting in hypersaline conditions in its shallow lakes and the closure of the estuarine mouth. This study aimed to assess the primary production rates of phytoplankton and microphytobenthos throughout an annual cycle of this drought phase. Primary production rates were assessed at representative sites, namely the Mouth, Narrows, South and North Lakes from June 2006 to May 2007. Because of the drought, the salinity gradient from the mouth to the head of the estuary was reversed by comparison to estuarine systems with a steady freshwater inflow and regular marine exchange. In March 2007, during the study, the mouth opened as a result of rough seas, and the marine influence broke the existing reversed gradient, producing a marine salinity throughout the system. Microphytobenthic primary productivity varied between 0 and 34 mg C m⁻² h⁻¹ and showed strong correlations with salinity, DIN:DIP ratios and irradiance. Benthic productivity was high across the system after breaching of the mouth. Pelagic primary productivity (between 0 and 180 mg C m⁻² h⁻¹), showed a correlation with temperature and irradiance and was highest across the system in February 2007 when the mouth was still closed. There was no significant correlation between production rates and biomass (chl-a) in either the benthic or pelagic habitats. The negative correlation between DIN:DIP ratio and benthic primary productivity indicated that phosphorus was the limiting nutrient. This study shows that salinity, along with seasonally dependent parameters such as temperature and irradiance, correlates with the rate of microalgal production. Hence, in these shallow lakes, the largest primary productivity can occur in either the pelagic or benthic subsystems, depending on prevailing conditions at the time.     

Influence of basin-scale and mesoscale physical processes on biological productivity in the Bay of Bengal during the summer monsoon

Physical forcing plays a major role in determining biological processes in the ocean across the full spectrum of spatial and temporal scales. Variability of biological production in the Bay of Bengal (BoB) based on basin-scale and mesoscale physical processes is presented using hydrographic data collected during the peak summer monsoon in July–August, 2003. Three different and spatially varying physical processes were identified in the upper 300 m: (I) anticyclonic warm gyre offshore in the southern Bay; (II) a cyclonic eddy in the northern Bay; and (III) an upwelling region adjacent to the southern coast. In the warm gyre (>28.8 °C), the low salinity (33.5) surface waters contained low concentrations of nutrients. These warm surface waters extended below the euphotic zone, which resulted in an oligotrophic environment with low surface chlorophyll a (0.12 mg m⁻³), low surface primary production (2.55 mg C m⁻³ day⁻¹) and low zooplankton biovolume (0.14 ml m⁻³). In the cyclonic eddy, the elevated isopycnals raised the nutricline upto the surface (NO₃–N > 8.2 μM, PO₄–P > 0.8 μM, SiO₄–Si > 3.5 μM). Despite the system being highly eutrophic, response in the biological activity was low. In the upwelling zone, although the nutrient concentrations were lower compared to the cyclonic eddy, the surface phytoplankton biomass and production were high (Chl a – 0.25 mg m⁻³, PP – 9.23 mg C m⁻³ day⁻¹), and mesozooplankton biovolume (1.12 ml m⁻³) was rich. Normally in oligotrophic, open ocean ecosystems, primary production is based on ‘regenerated’ nutrients, but during episodic events like eddies the ‘production’ switches over to ‘new production’. The switching over from ‘regenerated production’ to ‘new production’ in the open ocean (cyclonic eddy) and establishment of a new phytoplankton community will take longer than in the coastal system (upwelling). Despite the functioning of a cyclonic eddy and upwelling being divergent (transporting of nutrients from deeper waters to surface), the utilization of nutrients leading to enhanced biological production and its transfer to upper trophic levels in the upwelling region imply that the energy transfer from primary production to secondary production (mesozooplankton) is more efficient than in the cyclonic eddy of the open ocean. The results suggest that basin-scale and mesoscale processes influence the abundance and spatial heterogeneity of plankton populations across a wide spatial scale in the BoB. The multifaceted effects of these physical processes on primary productivity thus play a prominent role in structuring of zooplankton communities and could consecutively affect the recruitment of pelagic fisheries.     

Carbon cycling in a high-arctic marine ecosystem – Young Sound, NE Greenland

Young Sound is a deep-sill fjord in NE Greenland (74°N). Sea ice usually begins to form in late September and gains a thickness of 1.5 m topped with 0–40 cm of snow before breaking up in mid-July the following year. Primary production starts in spring when sea ice algae begin to flourish at the ice–water interface. Most biomass accumulation occurs in the lower parts of the sea ice, but sea ice algae are observed throughout the sea ice matrix. However, sea ice algal primary production in the fjord is low and often contributes only a few percent of the annual phytoplankton production. Following the break-up of ice, the immediate increase in light penetration to the water column causes a steep increase in pelagic primary production. Usually, the bloom lasts until August–September when nutrients begin to limit production in surface waters and sea ice starts to form. The grazer community, dominated by copepods, soon takes advantage of the increased phytoplankton production, and on an annual basis their carbon demand (7–11 g C m⁻²) is similar to phytoplankton production (6–10 g C m⁻²). Furthermore, the carbon demand of pelagic bacteria amounts to 7–12 g C m⁻² yr⁻¹. Thus, the carbon demand of the heterotrophic plankton is approximately twice the estimated pelagic primary production, illustrating the importance of advected carbon from the Greenland Sea and from land in fuelling the ecosystem.In the shallow parts of the fjord (<40 m) benthic primary producers dominate primary production. As a minimum estimate, a total of 41 g C m⁻² yr⁻¹ is fixed by primary production, of which phytoplankton contributes 15%, sea ice algae <1%, benthic macrophytes 62% and benthic microphytes 22%. A high and diverse benthic infauna dominated by polychaetes and bivalves exists in these shallow-water sediments (<40 m), which are colonized by benthic primary producers and in direct contact with the pelagic phytoplankton bloom. The annual benthic mineralization is 32 g C m⁻² yr⁻¹ of which megafauna accounts for 17%. In deeper waters benthic mineralization is 40% lower than in shallow waters and megafauna, primarily brittle stars, accounts for 27% of the benthic mineralization. The carbon that escapes degradation is permanently accumulated in the sediment, and for the locality investigated a rate of 7 g C m⁻² yr⁻¹ was determined.A group of walruses (up to 50 adult males) feed in the area in shallow waters (<40 m) during the short, productive, ice-free period, and they have been shown to be able to consume <3% of the standing stock of bivalves (Hiatella arctica, Mya truncata and Serripes Groenlandicus), or half of the annual bivalve somatic production. Feeding at greater depths is negligible in comparison with their feeding in the bivalve-rich shallow waters.     

Atmospherically-promoted photosynthetic activity in a well-mixed ecosystem: Significance of wet deposition events of nitrogen compounds

Wet atmospheric deposition of dissolved N, P and Si species is studied in well-mixed coastal ecosystem to evaluate its potential to stimulate photosynthetic activities in nutrient-depleted conditions. Our results show that, during spring, seawater is greatly depleted in major nutrients: Dissolved Inorganic Nitrogen (DIN), Dissolved Inorganic Phosphorus (DIP) and Silicic acid (Si), in parallel with an increase of phytoplanktonic biomass. In spring (March–May) and summer (June–September), wet atmospheric deposition is the predominant source (>60%, relative to riverine contribution) for nitrates and ammonium inputs to this N-limited coastal ecosystem. During winter (October–February), riverine inputs of DIN predominate (>80%) and are annually the most important source of DIP (>90%). This situation allows us to calculate the possibility for a significant contribution to primary production in May 2003, from atmospheric deposition (total input for DIN ≈300 kg km⁻² month⁻¹). Based on usual Redfield ratios and assuming that all of the atmospheric-derived N (AD-N) in rainwater is bioavailable for phytoplankton growth, we can estimate new production due to AD-N of 950 mg C m⁻² month⁻¹, during this period of depletion in the water column. During the same episode (May 2003), photosynthetic activity rate, considered as gross primary production, was estimated to approximately 30 300 mg C m⁻² month⁻¹. Calculation indicates that new photosynthetic activity due to wet atmospheric inputs of nitrogen could be up to 3%.     

Impact of freshwater influx on microzooplankton mediated food web in a tropical estuary (Cochin backwaters – India)

The diversity, abundance and biomass of microzooplankton in Cochin backwaters were studied for the first time during pre-summer monsoon to peak of summer monsoon (April–July 2003) to understand the impact of large freshwater influx. Microzooplankton abundance and biomass were highest during pre-summer monsoon (av. 3817 ind. L⁻¹ and 146 μg C L⁻¹) that declined with the onset (av. 2052 ind. L⁻¹ and 45 μg C L⁻¹) and peak (av. 409 ind. L⁻¹ and 10 μg C L⁻¹) summer monsoon. Species diversity, richness and evenness of microzooplankton also showed similar trends as that of abundance and biomass. Grazing experiment showed that microzooplankton consumes 43 ± 1% of the daily phytoplankton standing stock during the high saline condition (27.5). Low abundance of microzooplankton during summer monsoon period (1/8 of the pre-summer monsoon value) along with the concomitant occurrence of low mesozooplankton (1/8 times of pre-summer monsoon value) suggests that there could be a general lack of planktonic grazers. This would result in a weak transfer of primary and bacterial carbon to higher trophic levels, eventually leaving behind much unconsumed basic food in the estuary during summer monsoon. Thus a major portion of the primary carbon either settles down or gets transported to the coastal regions during monsoon. High flushing of Cochin backwaters also facilitates faster removal of primary producers to the coastal regions during monsoon.     

Mesozooplankton dynamics in nearshore waters of the Great Barrier Reef

Zooplankton dynamics (community composition, juvenile somatic growth rate, adult egg production, secondary production) were studied in coastal waters of the Great Barrier Reef. Two sectors were compared, one adjacent to a catchment of near-pristine land use patterns, the other to a more intensively farmed catchment. Sampling was conducted in the austral winter (August) and summer (January–March) of two succeeding years. Gradients in zooplankton community composition were weak, with only moderate effects of season and sector. Overall, 37% of zooplankton biomass was in the 73–150 μm size fraction, 26% in the 150–350 μm fraction, and 38% was >350 μm. There was no biomass difference and only small differences in community composition between samples taken during the day and at night; ostracods and large calanoid copepods were occasionally more common at night. Carbon-specific growth rates averaged 0.29 d⁻¹ for cyclopoid copepods and 0.35 d⁻¹ for calanoid copepods, with no difference between sectors. Calanoid copepod growth showed a significant relationship to chlorophyll concentration, but cyclopoid copepods did not. Copepod egg production was low (7.9 ± 5.9 eggs female⁻¹ d⁻¹) and apparently food-limited. Copepod secondary production was lower in August (mean = 2.6, range 1.4–4.0 mg C m⁻² d⁻¹) than in January–March (mean = 8.5, range 2.4–15.5 mg C m⁻² d⁻¹). Secondary production by mesozooplankton in the 73–100 μm size range averaged 0.9% of total phytoplankton production.     

Dynamics of microphytobenthic biomass in a coastal area of western Seto Inland Sea, Japan

This study focused on the causes of the variation in microphytobenthic biomass and the effects of this variation on macrobenthic animals in the western Seto Inland Sea, Japan, where the importance of microphytobenthos as the primary food source for benthic animals has been recently reported. We investigated the microphytobenthic biomass together with light attenuation of seawater, phytoplanktonic biomass, macrobenthic density and biomass at eight stations (water depth = 5–15 m) during four cruises in 1999–2000. The increased light attenuation coefficient of the water column associated with increased concentration of the phytoplanktonic Chl-a caused a decrease in light flux that reached the seafloor. The biomass of the microphytobenthos within the upper 1 cm of the sediment, 1.9–46.5 mg Chl-a m⁻², was inversely correlated with the phytoplanktonic biomass in the overlying water column, 10.9–65.0 mg Chl-a m⁻². Thus, interception of light by phytoplankton is considered to be a main cause of the variation in the microphytobenthic biomass. The microphytobenthos biomass showed a significant positive correlation with the macrobenthic density (78–9369 ind. m⁻²) and biomass (0.4–78.8 gWW m⁻²). It appears that the increase in oxygen production by the microphytobenthos allowed macrobenthic animals to become more abundant, as a consequence of oxygenation of the organically enriched muddy sediments (14.5 ± 2.69 mg TOC g⁻¹). This study suggests that the variation in the microphytobenthic biomass is influenced by the phytoplanktonic biomass due to shading effect, and the balance between these two functional groups might affect the variability in the macrobenthic density and biomass.     

Amphipod prey of gray whales in the northern Bering Sea: Comparison of biomass and distribution between the 1980s and 2002–2003

The ampeliscid amphipod community in the Chirikov Basin of the northern Bering Sea was a focus of study during the 1980s because they were a major food for the Eastern North Pacific (ENP) population of gray whales Eschrichtius robustus. Information from the 1980s benthic investigations, published accounts of ENP gray whale population trends and the occurrence in 1999–2000 of an unusual number of gray whale mortalities prompted concern that the whale population may have exceeded the carrying capacity of its food base. Therefore, during two cruises per year between June and September, 2002 and 2003, we resampled the 20 stations occupied during the 1980s, to determine if there had been any significant changes in ampeliscid abundance and biomass. During 2002–2003, average ampeliscid dry weight biomass was about 28±10 g m⁻² (95% confidence interval), a decline of nearly 50% from maximum values in the 1980s. Amphipod length measurements indicated that the declines were due mainly to the absence of the larger animals (20–30 mm length). Two hypotheses were considered regarding the amphipod declines: gray whale predation and climate. Ampeliscid production (105 kcal m⁻² yr⁻¹) and gray whale energy requirements (1.6×10⁸ kcal individual⁻¹ yr⁻¹) indicated that as little as 3–6% of the current estimate of the ENP gray whale population could remove 10–20% of the annual ampeliscid production from the study site in 2002–2003, a finding consistent with the hypothesis that top-down control by foraging whales was the primary cause of the observed declines. A 10-yr time series of temperature near the bottom in the Bering Strait and northward transport did not reveal a consistent trend between 1990 and 2001, suggesting that climate influences were not the major cause of the observed declines. Arctic ampeliscids have slow growth rates and long generation times; therefore the ampeliscid community may require decades to recover to densities observed in the 1980s. Predicted warming trends in the northern Bering Sea could impact ampeliscid recovery by lowering primary production or altering the community composition of the benthos.     

Structure and photosynthetic properties of phytoplankton assemblages in a highly dynamic system, the Northern Adriatic Sea

The photosynthetic properties of phytoplankton populations as related to physical–chemical variations on small temporal and spatial scales and to phytoplankton size structure and pigment spectra were investigated in the Northern Adriatic Sea off the Po River delta in late winter 1997. Large diatoms (fucoxanthin) dominated the phytoplankton in the coastal area whereas small phytoflagellates (mainly 19′-hexanoyloxyfucoxanthin, chlorophyll b, 19′-butanoyloxyfucoxanthin) occurred outside the front. The front was defined by the steep gradient in density in the surface layer separating low-salinity coastal waters from the offshore waters.Physical features of the area strongly influenced phytoplankton biomass distributions, composition and size structure. After high volumes of Po River discharge several gyres and meanders occurred in the area off the river delta in February. Decreasing river discharge and the subsequent disappearance of the gyres and the spreading dilution of the river plume was observed in March. The dynamic circulation of February resulted in high photosynthetic capacity of the abundant phytoplankton population (>3.40 mg m⁻³). In March, the slow circulation and an upper low-salinity water layer, segregated from the deeper layers, resulted in lack of renewal of this water mass. The huge phytoplankton biomass, up to 15.77 mg chl a m⁻³, became nutrient depleted and showed low photosynthetic capacity. In February, an exceptionally high P_max^B, 20.11 mg C (mg chl a)⁻¹ h⁻¹ was recorded in the Po River plume area and average P_max^B was three-fold in February as compared to the March recordings, 10.50 mg C (mg chl a)⁻¹ h⁻¹ and 3.22 mg C (mg chl a)⁻¹ h⁻¹, respectively.The extreme variability and values of phytoplankton biomass in the innermost plume area was not always reflected in primary production. Modeling of circulation patterns and water mass resilience in the area will help to predict phytoplankton response and biomass distributions. In the frontal area, despite a considerable variability in environmental conditions, our findings have shown that the phytoplankton assemblages will compensate for nutrient depression and hydrographic constraints, by means of size and taxonomic composition and, as a result, the variability in the photosynthetic capacity was much less pronounced than that observed for other parameters.     

Remotely sensed sea-surface chlorophyll and POC flux at Deep Gulf of Mexico Benthos sampling stations

Biweekly composite averages of the standing stock of sea-surface chlorophyll (SSC) were derived from SeaWiFS satellite ocean-color data at 44 benthic sampling stations occupied along the continental slope and rise by the Deep Gulf of Mexico Benthos (DGoMB) program. At the 22 DGoMB sites north of 26°N and west of 91°W in the NW Gulf of Mexico, annual average SSC was 0.19 mg m⁻³, ranging at most locations from annual highs of about 0.3 mg m⁻³ in November–February to lows of about 0.1 mg m⁻³ in May–August. Comparison of three years of SeaWiFS data (January 1998–December 2000) showed little inter-annual variation at these NW Gulf stations. In contrast, at the 22 NE Gulf sites north of 26°N and east of 91°W, SSC averaged 2.8 times higher than in the NW Gulf, showing also strong inter-annual variation. Maxima in the NE region occurred in November–February and also during summers. The summer maxima were associated with Mississippi River water transported offshore to the east and southward by anticyclonic eddies in the NE Gulf. The apparent increases in SSC in June–August at NE Gulf stations reached average monthly concentrations >50% greater than in November–February. Based on a primary productivity model and a vertical flux model, the calculated export of particulate organic carbon (POC flux reaching the seafloor) was estimated as 18 mg C m⁻² day⁻¹ at the 22 NE Gulf stations, and 9 mg C m⁻² day⁻¹ at the 22 NW Gulf stations. These estimates are comparable to fluxes measured by benthic lander by others in the DGoMB program, which may drive the differences in west versus east bathymetric zonation and community structure of macrobenthos that were sampled with large box corers by others in the DGoMB program.     

Downward carbon transport by diel vertical migration of the copepods Metridia pacifica and Metridia okhotensis in the Oyashio region of the western subarctic Pacific Ocean

Seasonal change in the downward carbon transport due to respiration and mortality through diel vertical migration (DVM) of the calanoid copepods Metridia pacifica and Metridia okhotensis was estimated in the Oyashio region, western subarctic Pacific during six cruises from June 2001 to June 2002. M. pacifica (C4, C5 and adult females) was an active migratory species throughout the year though its DVM amplitude varied among seasons and stages. The mean distribution depths of adult females during the daytime were positively related with the illumination level in the water column, being shallowest in April and deepest in January. M. okhotensis generally showed less-extensive migrations than M. pacifica. Therefore, together with their lower abundance, this species is considered to be a less-important mechanism of downward transport of carbon except for April when their DVM was more active and descended deeper than M. pacifica, which remained in the upper 150 m even during the daytime. The mean migrating biomass of the two Metridia species was 558 mg C m⁻² d⁻¹ and was high during summer to winter (263–1676 mg C m⁻² d⁻¹) and low during spring (59–63 mg C m⁻² d⁻¹). Total downward flux through DVM fluctuated between 1.0 and 20.0 mg C m⁻² d⁻¹ with an annual mean of 8.0 mg C m⁻² d⁻¹. Contribution of the respiratory flux was greater than the mortality flux and accounted for 64–98% of total migratory flux throughout the year except for January when contribution of both fluxes was equal. Overall the annual carbon transport by DVM of Metridia spp. was estimated as 3.0 g C m⁻² year⁻¹, corresponding to 15% of the annual total POC flux at 150 m at the study site, suggesting that DVM is a significant process for carbon export in the subarctic region as well as that in tropical and subtropical oceanic regions. Since DVM in M. pacifica is more active during the non-bloom season when the gravitational flux of particulate matter is low, this species plays an important role in driving the biological pump in the subarctic Pacific during summer to winter.     

Microphytobenthos vertical migratory photoresponse as characterised by light-response curves of surface biomass

The migratory response of intertidal microphytobenthos to changes in irradiance was studied on undisturbed estuarine sediments. Two non-destructive optical techniques were used to trace variations in vivo of surface biomass: PAM fluorometry, for measuring the minimum fluorescence level (F_o); and spectral reflectance analysis, for quantifying the normalized difference vegetation index (NDVI). Following the formation of a dense biofilm at the surface, replicated sediment samples were simultaneously exposed to six different irradiance levels, ranging from 50 to 1500 μmol m⁻² s⁻¹, during a period of 120 min. The migratory photoresponse of the biofilms was characterised by constructing biomass vs. light curves (BLC), relating the accumulation of microalgal biomass after that period (estimated by F_o or NDVI) to the irradiance level incident on the surface. BLCs allow characterising the main features of the migratory photoresponse of intact biofilms. Typical BLC showed a clear biphasic pattern, with an increase in microalgal accumulation under irradiances below 100 μmol m⁻² s⁻¹, maximum values under 100–250 μmol m⁻² s⁻¹, and a gradual decrease of surface biomass under higher irradiances, indicating a strong photophobic downward migratory response. Similar BLC patterns were obtained when measuring F_o or NDVI. The construction of BLCs for biofilms from intertidal sites with distinctive sediment characteristics and diatom taxonomic composition allowed to detected significant differences in the migratory photoresponse. Biofilms from a muddy sediment exhibited considerably larger amplitude in the migratory photoresponse than the biofilms from a sandy mud site, especially under high irradiances. The photophobic migratory response to high light was found to vary among diatom species, particularly in the case of the biofilms from the muddy sediments.     

Benthic microalgal biomass in sediments of Onslow Bay, North Carolina

Sediment samples were collected at stations along cross-shelf transects in Onslow Bay, North Carolina, during two cruises in 1984 and 1985. Station depths ranged from 11 to 285 m. Sediment chlorophyll a concentrations ranged from 0·06 to 1·87 μg g⁻¹ sediment (mean, 0·55), or 2·6–62·0 mg m². Areal sediment chlorophyll a exceeded water column chlorophyll a a at 16 of 17 stations, especially at inshore and mid-shelf stations. Sediment ATP concentrations ranged from 0 to 0·67 μg g⁻¹ sediment (mean, 0·28). Values for both biomass indicators were lowest in the depth range including the shelf break (50–99 m). Organic carbon contents of the sediments were uniformly low across the shelf, averaging 0·159% by weight. Photography of the sediments revealed extensive patches of microalgae on the sediment surface.Our data suggest that viable benthic microalgae occur across the North Carolina continental shelf. The distribution of benthic macroflora on the North Carolina shelf indicates that sufficient light and nutrients are available to support primary production out to the shelf break. Frequent storm-induced perturbations do not favour settling of phytoplankton, an alternative explanation for the presence of microalgal pigments in the sediments. Therefore, we propose that a distinct, productive benthic microflora exists across the North Carolina continental shelf.     

Spatial and temporal patterns in bacterial abundance, production and viral infection in a temporarily open/closed southern African estuary

The spatial and temporal patterns in bacterial abundance, biomass, production, nanoflagellate abundance and the loss of bacterial production due to viral lysis were investigated in a temporarily open/closed estuary along the eastern seaboard of southern Africa over the period May 2006 to April 2007. Bacterial abundance, biomass and production ranged between 1.00 × 10⁹ and 4.93 × 10⁹ cells l⁻¹, 32.43 and 108.59 μg C l⁻¹ and 0.01 and 1.99 μg C l⁻¹ h⁻¹, respectively. With a few exceptions there were no significant spatial patterns in the values (P > 0.05). Bacterial abundance, biomass and production, however, demonstrated a distinct temporal pattern with the lowest values consistently recorded during the winter months. Bacterial dynamics showed no effect of mouth opening events. Nanoflagellate and bacterial abundances were significantly correlated to one another (P < 0.05) suggesting a strong predator-prey relationship. The frequency of visibly infected bacterial cells and the number of virus particles within each bacterial cell during the study demonstrated no significant temporal or spatial pattern (P > 0.05) and ranged from 0.5 to 6.1% and 12.0 to 37.5 virus particles per bacterium, respectively. Viral infection and lysis was thus a constant source of bacterial mortality throughout the year. The estimated percentage of bacterial production removed by viral lysis ranged between 7.8 and 88.9% (mean = 30.3%) of the total which suggests that viral lysis represents a very important source of bacterial mortality during the study.     

The sources and accumulation rate of sedimentary organic matter in the Pearl River Estuary and adjacent coastal area, Southern China

In this study, the contents, sources and accumulation rate of sedimentary organic matter (OM) in the Pearl River Estuary (PRE) and adjacent coastal area were investigated. The stable carbon isotopic composition (δ¹³C) is a reliable geochemical proxy and was used to indicate the OM origin here. Nevertheless, the organic carbon and nitrogen molar ratios (TOC/TN) and the stable nitrogen isotopic composition (δ¹⁵N) were affected by diagenesis and could be the supplementary indicators. The sources of OM were estimated based on the two end-member model. The results showed that in the estuary, sedimentary OM originated from terrestrial and aquatic mixing origins, whereas, OM in coastal sediments was dominantly algae-derived. The accumulation rate of sedimentary OM was analyzed based on ²¹⁰Pb dating. Due to the sampling sites and the distinct hydraulic environments, the accumulation rates of TOC, aquatic and terrestrial OC were obviously higher in the estuary than in coastal area. TOC accumulation rates were 18–27 mg cm⁻² y⁻¹ in the estuary, and 0.84–3.6 mg cm⁻² y⁻¹ in coastal area. Aquatic OC accumulation rates were 7.9–11.3, 0.8–1.3, and 2.6–3.1 mg cm⁻² y⁻¹, and terrestrial OC accumulation rates were 9.7–16.3, 0.02–0.14, 0.16–0.42 mg cm⁻² y⁻¹ in cores 2, 5, 6, respectively. It could be seen from the high accumulation rate of organic matter in the estuary that, when nutrients increased in the river, phytoplankton biomass and productivity would also have increased. As a result, phytoplankton sinking and organic matter sedimentation usually increased with primary productivity, resulting in the observed accumulation rate of aquatic OC in the estuary. Furthermore, terrestrial OC accumulation rates in the estuary and coastal area showed an increasing trend with the age.     

Benthic foraminifera living in Gulf of Mexico bathyal and abyssal sediments: Community analysis and comparison to metazoan meiofaunal biomass and density

Benthic foraminiferal biomass, density, and species composition were determined at 10 sites in the Gulf of Mexico. During June 2001 and 2002, sediment samples were collected with a GoMex box corer. A 7.5-cm diameter subcore was taken from a box core collected at each site and sliced into 1-cm or 2-cm sections to a depth of 2 or 3 cm; the >63-μm fraction was examined shipboard for benthic foraminifera. Individual foraminifers were extracted for adenosine triphosphate (ATP) using a luciferin–luciferase assay, which indicated the total ATP content per specimen; that data was converted to organic carbon. Foraminiferal biomass and density varied substantially (2–53 mg C m⁻²; 3600–44,500 individuals m⁻², respectively) and inconsistently with water depth: although two 1000-m deep sites were geographically separated by only 75 km, the foraminiferal biomass at one site was relatively low (9 mg C m⁻²) while the other site had the highest foraminiferal biomass (53 mg C m⁻²). Although most samples from Sigsbee Plain (>3000 m) had low biomass, one Sigsbee site had >20 mg foraminiferal C m⁻². The foraminiferal community from all sites (i.e. bathyal and abyssal locales) was dominated by agglutinated, rather than calcareous or tectinous, species. Foraminiferal density never exceeded that of metazoan meiofauna at any site. Foraminiferal biomass, however, exceeded metazoan meiofaunal biomass at 5 of the 10 sites, indicating that foraminifera constitute a major component of the Gulf's deep-water meiofaunal biomass.     

N2O Production, Nitrification and Denitrification in an Estuarine Sediment

The mechanisms regulating N₂O production in an estuarine sediment (Tama Estuary, Japan) were studied by comparing the change in N₂O production with those in nitrification and denitrification using an experimental continuous-flow sediment–water system with¹⁵N tracer (¹⁵N-NO−3 addition). From Feburary to May, both nitrification and denitrification in the sediment increased (246 to 716 μmol N m⁻² h⁻¹and 214 to 1260 μmol N m⁻² h⁻¹, respectively), while benthic N₂O evolution decreased slightly (1560 to 1250 nmol N m⁻² h⁻¹). Apparent diffusion coefficients of inorganic nitrogen compounds and O₂at the sediment–water interface, calculated from the respective concentration gradients and benthic fluxes, were close to the molecular diffusion coefficients (0·68–2·0 times) in February. However, they increased to 8·8–52 times in May except for that of NO−2, suggesting that the enhanced NO−3 and O₂supply from the overlying water by benthic irrigation likely stimulated nitrification and denitrification. Since the progress of anoxic condition by the rise of temperature from February to May (9 to 16 °C) presumably accelerated N₂O production through nitrification, the observed decrease in sedimentary N₂O production seems to be attributed to the decrease in N₂O production/occurrence of its consumption by denitrification. In addition to the activities of both nitrification and denitrification, the change in N₂O metabolism during denitrification by the balance between total demand of the electron acceptor and supply of NO−3+NO−2 can be an important factor regulating N₂O production in nearshore sediments.     

A Trophic Flow Model of the Caeté Mangrove Estuary (North Brazil) with Considerations for the Sustainable Use of its Resources

The Caeté Estuary lies within the world's second largest mangrove region, 200 km south-east of the Amazon delta. It has an extension of about 220 km²and is subjected to a considerable human impact through intensive harvest of mangrove crabs (Ucides cordatus) and logging of mangroves. In order to integrate available information on biomass, catches, food spectrum and dynamics of the main species populations of the system, a trophic steady state model of 19 compartments was constructed using the ECOPATH II software (Christensen & Pauly, 1992). Ninety-nine percent of total system biomass is made up by mangroves (Rhizophora mangle, Avicennia germinans andLaguncularia racemosa ), which are assumed to cover about 45% of the total area and contribute about 60% to the system's primary production. The remaining biomass (132 g m⁻²) is distributed between the pelagic and benthic domains in proportions of 10% and 90% respectively. Through litter fall, mangroves inject the main primary food source into the system, which is either consumed directly by herbivores (principally land crabs, Ucides cordatus) or, when already metabolized by bacteria, by detritivors (principally fiddler crabs, Uca spp.). These two groups are prominent in terms of biomass (80 g and 14·5 g m⁻²), and food intake (1120 g m⁻² yr⁻¹and 1378 g m⁻² yr⁻¹respectively). According to the model estimates, energy flow through the fish and shrimp compartments is of relatively low importance for the energy cycling within the system, a finding which is contrary to the situation in other mangrove estuaries reported in the literature. The dominance of mangrove epibenthos is attributed to the fact that a large part of the system's production remains within the mangrove forest as material export to the estuary is restricted to spring tides, when the forest is completely indundated. This is also the reason for the low abundance of suspension feeders, which are restricted to a small belt along the Caeté River and the small creeks which are watered daily. Phytoplankton, temporarily refloating benthic diatoms, neritic zooplankton and small pelagic fish dominate the (low) pelagic biomass. Total system throughput (10 559 g m⁻² yr⁻¹) and mean transfer efficiency between trophic levels (9·8%) calculated by the model fit well into the range reported for other tropical coastal ecosystems. The very high gross efficiency of the fishery (catch/net primary production) of 8·6% and its low trophic level (2·1) is explained by a high harvesting rate of mangroves and the fact that the main animal resource in the system are the mangrove crabs (Ucides cordatus), which feed at the first trophic level. The model was balanced asuming a turnover rate for the land crabs of P/B=0·25 (P/B: production per unit of biomass) which is possibly too high. If this value was replaced by a (possibly more realistic) lower value, the model would not balance, suggesting a situation in which more biomass is being harvested than produced, which hints to an overexploitation of this resource A ranking of the various system components in terms of their contribution to the system function (ascendency sensu Ulanowicz, 1997) revealed that detritus and associated bacteria contribute 34%, mangroves 19%, fiddler crabs 13%, phytoplankton and microphytobenthos 10%, mangrove crabs 10%, and the remaining 14 groups 14% to the total ascendency. Summary statistics of the model are given and compared with those of other coastal ecosystems.