Patterns of growth in cold-seep vestimenferans including Seepiophila jonesi: a second species of long-lived tubeworm

Seepiophila jonesi is a vestimentiferan tubeworm (Siboglinidae: Polychaeta) inhabiting the cold seeps of the upper slope of the Gulf of Mexico. It commonly co‐occurs with Lamellibrachia luymesi, which is among the most long‐lived non‐clonal animals known. The growth pattern of S. jonesi is best described by a model including a size‐specific probability of growth and an average growth rate that does not vary with individual size. This model, based on growth data from in situ staining and collection approximately 1 year later, predicts that S. jonesi is very slow growing and may attain ages comparable with L. luymesi. The efficacy of this model in describing L. luymesi growth rate was assessed, but the previously employed model of declining growth rate with individual size provided the better fit to the empirical data. Comparisons of both S. jonesi and L. luymesi growth rates among sites and among aggregations within a site indicate that there is some degree of habitat variability contributing to differences in growth rates. However, position of the anterior end of the worm within an aggregation did not have a significant effect on growth rate in comparisons among groups of L. luymesi from different distances from the center of an aggregation. The evolution of longevity in these species of vestimentiferans was favored by the relative stability of the seep habitat and sulfide sources, in contrast to the hydrothermal vent environment inhabited by relatively short‐lived and fast‐growing vestimentiferan species.     

Importance of seep primary production to Lophelia pertusa and associated fauna in the Gulf of Mexico

To investigate the importance of seep primary production to the nutrition of Lophelia pertusa and associated communities and examine local trophic interactions, we analyzed stable carbon, nitrogen, and sulfur compositions in seven quantitative L. pertusa community collections. A significant seep signature was only detected in one of the 35 species tested (Provanna sculpta, a common seep gastropod) despite the presence of seep fauna at the three sample sites. A potential predator of L. pertusa was identified (Coralliophila sp.), and a variety of other trophic interactions among the fauna occupying the coral framework were suggested by the data, including the galatheid crab Munidopsis sp. 2 feeding upon hydroids and the polychaete Eunice sp. feeding upon the sabellid polychaete Euratella sp. Stable carbon abundances were also determined for different sections of L. pertusa skeleton representing different stages in the growth and life of the aggregation. There was no temporal trend detected in the skeleton isotope values, suggesting that L. pertusa settles in these areas only after seepage has largely subsided. Isotope values of individual taxa that were collected from both L. pertusa and vestimentiferan habitats showed decreasing reliance upon seep primary production with average age of the vestimentiferan aggregation, and finally, no seep signature was detected in the coral collections. Together our data suggest that it is the presence of authigenic carbonate substrata, a product of past seep microbial activity, as well as hydrodynamic processes that drive L. pertusa occurrence at seep sites in the Gulf of Mexico, not nutritional dependence upon primary production by seep microbes.     

Depth-related structure and ecological significance of cold-seep communities—a case study from the Sea of Okhotsk

We discovered and investigated several cold-seep sites in four depth zones of the Sea of Okhotsk off Northeast Sakhalin: outer shelf (160–250 m), upper slope (250–450 m), intermediate slope (450–800 m), and Derugin Basin (1450–1600 m). Active seepage of free methane or methane-rich fluids was detected in each zone. However, seabed photography and sampling revealed that the number of chemoautotrophic species decreases dramatically with decreasing water depth. At greatest depths in the Derugin Basin, the seeps were inhabited by bacterial mats and bivalves of the families Vesicomyidae (Calyptogena aff. pacifica, C. rectimargo, Archivesica sp.), Solemyidae (Acharax sp.) and Thyasiridae (Conchocele bisecta). In addition, pogonophoran tubeworms of the family Sclerolinidae were found in barite edifices. At the shallowest sites, on the shelf at 160 m, the seeps lack chemoautotrophic macrofauna; their locations were indicated only by the patchy occurrence of bacterial mats.Typical seep-endemic metazoans with chemosynthetic symbionts were confined to seep sites at depths below 370 m. A comparative analysis of the structure of seep and background communities suggests that differences in predation pressure may be an important determinant of this pattern. The abundance of predators such as carnivorous brachyurans and asteroids, which can invade seeps from adjacent habitats and efficiently prey on sessile seep bivalves, decreased very pronouncedly with depth. We conclude from the obvious correlation with the conspicuous pattern in the distribution of seep assemblages that, on the shelf and at the upper slope, predator pressure may be high enough to effectively impede any successful settlement of viable populations of seep-endemic metazoans. However, there was also evidence that other depth-related factors, such as bottom-water current, sedimentary regimes, oxygen concentrations and the supply of suitable settling substrates, may additionally regulate the distribution of seep fauna in the area.As a consequence of the pronounced pattern in the distribution of seep communities, their ecological significance as food sources of surrounding background fauna increased with water depth. Isotopic analyses suggest that in the Derugin Basin seep colonists feed on chemoautotrophic seep organisms, either directly or by preying on metazoans with chemosynthetic symbionts. In contrast, seep organisms apparently do not contribute to the nutrition of the adjacent background fauna on the shelf and at the slope. In this area, elevated epifaunal abundances at seep sites were caused primarily by the availability of suitable settling substrates rather than by an enrichment of food supply.     

Monterey Bay cold-seep biota: Assemblages,abundance, and ultrastructure of living foraminifera

Although there is a growing body of evidence indicating benthic foraminifera inhabit hydrocarbon and cold seep environments, biochemical and ultrastructural data on seep foraminiferal communities are not available. Therefore, sediments collected from cold seeps in Monterey Bay, CA (900–1000 m), were examined for the presence of live benthic foraminifera. Results from three independent methods (ATP assay, ultrastructural analysis, rose Bengal staining) indicate that certain species inhabit the Clam Flat and Clam Field seeps. Abundances in our seep samples were lower than in comparable non-seep sites, although not atypical for these bathyal depths. Of 38 species represented at these two seep sites by cytoplasm-containing specimens, only Spiroplectammina biformis was restricted to the seep environment. However, because S. biformis is also known from non-seep sites in other areas, it should not be considered as endemic to seeps. Ultrastructural studies show abundant peroxisomes in seep specimens, which may allow inhabitation of such environments. One specimen of Uvigerina peregrina had prokaryotes nestled in test pores, suggesting that bacteria may play a role in the survival of foraminifera in this seep environment.     

Deep-sea habitat heterogeneity influence on meiofaunal communities in the Gulf of Guinea

To estimate the degree of spatial heterogeneity of benthic deep-sea communities, we carried out a multiple-scale (from m's to 200 km) investigation in the Congo-Angola margins (Equatorial West African margin, 3150–4800 m) in which we examined the metazoan meiofauna at a variety of habitats along the Congo Channel system and in the associated cold seep. We investigate the structure, density, vertical distribution patterns in the sediment and biomass of meiofaunal communities in the Gulf of Guinea and how they are controlled by hydrologic and biogeochemical processes. The meiofaunal communities in the Gulf of Guinea were shaped by heterogeneous conditions on the margin, and reflect the multiple-scale spatial variability that corresponds with the different identified habitats. The two control sites, located at >100 km away from the canyon, were inhabited by very dense and the most diverse meiobenthic communities. Similar meiobenthic communities inhabited the transition zone between the canyon and the cold seep. Sites located along the Congo Channel were obviously affected by the local high-velocity bottom currents and unstable sedimentary conditions in this active submarine system. Extremely low meiobenthic densities and very low proportions in the most surficial sediment layers provided evidence for recently highly disturbed sediments at these sites. The remote operated vehicle (ROV) Victor 6000 provided images of the cold seep, showing a patchy distribution of several types of patchy distributed megafaunal communities dominated by three key symbiotic taxa (Mytilidae, Vesicomyidae and Siboglinidae). These cold seep sediments were colonised by a unique meiobenthic community, characterised by a high small-scale (m's) patchiness, low species richness and the prominent dominance of two large-sized nematode species: Sabatieria mortenseni, which is a cosmopolitan nematode known from littoral habitats, and an undescribed Desmodora species. The high individual body weight of S. mortenseni and its dominance at the cold seep site resulted in a significantly higher nematode biomass at the seep compared to the surrounding sites. In addition, the vertical nematode profiles, with maximum proportions in subsurficial layers, points to a chemosynthesis-based meiobenthic community in this cold seep, in contrast to the phytodetritus-based communities at the control sites and at the transition zone.     

Cold seeps of the deep Gulf of Mexico: Community structure and biogeographic comparisons to Atlantic equatorial belt seep communities

Quantitative collections of tubeworm- and mussel-associated communities were obtained from 3 cold seep sites in the deep Gulf of Mexico: in Atwater Valley at 1890 m depth, in Alaminos Canyon at 2200 m depth, and from the Florida Escarpment at 3300 m depth. A total of 50 taxa of macro- and megafauna were collected including 2 species of siboglinid tubeworms and 3 species of bathymodiolin mussels. In general, the highest degree of similarity was between communities collected from the same site. Most of the dominant families at the well-characterized upper Louisiana slope seep sites of the Gulf of Mexico were present at the deep sites as well; however, there was little overlap at the species level between the upper and lower slope communities. One major difference in community structure between the upper and lower slope seeps was the dominance of the ophiuroid Ophioctenella acies in the deeper communities. The transition between upper and lower slope communities appears to occur between 1300 and 1700 m based on the number of shared species with the Barbados seeps at either end of this depth range. Seep communities of the deep Gulf of Mexico were more similar to the Barbados Accretionary Prism seep communities than they were to either the upper slope Gulf of Mexico or Blake Ridge communities based on numbers of shared species and Bray–Curtis similarity values among sites. The presence of shared species among these sites suggests that there is ongoing or recent exchange among these areas. An analysis of bathymodioline mussel phylogeography that includes new collections from the west coast of Africa is presented. This analysis also suggests recent exchange across the Atlantic equatorial belt from the Gulf of Mexico to the seeps of the West Nigerian margin.     

Isolation via enrichment and characterization of ten polymorphic microsatellite loci in the cuttlefish, Sepiella maindroni de Rochebruns

Ten novel polymorphic microsatellite loci were developed using an enrichment and colony hybridization protocol and characterized for the cuttlefish, Sepiella maindroni. Polymorphism was explored by using 30 individuals from the coastal waters of Zhanjiang, Guangdong province, China, in December 2007. The number of alleles ranged from 5 to 13. The ranges of observed and expected heterozygosity were from 0.578 9 to 1.000 0 and 0.682 8 to 0.925 7, respectively, and the average polymorphic information content (PIC) was 0.778 5. These microsatellite loci will certainly facilitate the detection of the genetic variation and population structure of S. maindroni.     

Genetic diversity and adaptability of two species of Mugilidae (Teleostei: Perciformes) of the Po river delta coastal lagoons

Molecular polymorphisms (allozyme and amplified fragment length polymorphisms (AFLP)) were investigated in the mullet specie's Liza ramada and Liza saliens to determine levels of genetic variability and assess possible correlations between the population genetic structure and the specie's adaptability to shallow water environments. The thinlipped (L. ramada) and the sharpnose (L. saliens) mullets are diadromous species that enter coastal lagoons during early life stages to complete growth previous to sexual maturation. Bi-monthly samples (n = 30–50) were collected in the period 2000–2002 in different sites of the Sacca di Goro (Po river delta) and a nearby aquaculture lagoon (Valle Bertuzzi). Biochemical analyses were carried out by means of starch gel electrophoresis (SGE) on 24 genetic loci corresponding to 15 gene–enzyme systems. In addition, molecular species-specific AFLP (15 primer combinations) were obtained by means of capillary electrophoresis. The degree of allozyme variability determined at three polymorphic loci, GPI-A, GPI-B and G3PDH in L. saliens and L. ramada (polymorphic loci P = 0.08; mean heterozygosity H = 0.010–0.022) and AFLP diversity (P = 0.110–0.430), seems lower than the one reported in the literature for ecologically similar teleost species. The identification of diagnostic alleles at GPI-A, G3PDH, AK-2, CK-A, CK-B, AAT, IDH, PGM-1, PGM-2 loci in the two mullet species was used for the taxonomic classification of L. saliens and L. ramada. Molecular taxonomy (allozyme and AFLP) demonstrated that the presence of small individuals inside the lagoons previously identified according to morphological characters has often been misinterpreted. The results are discussed in relation to the adaptive role of genetic variation and the migratory characteristics of Mugilidae.     

The ecology and distribution of benthic foraminifera at the Håkon Mosby mud volcano (SW Barents Sea slope)

To investigate a possible influence of submarine methane seepage on benthic foraminiferal communities, Rose Bengal stained (“live”) and empty tests of benthic foraminifera were studied from the sediment surface down to 15 cm sub-bottom depth of 12 sites at the Håkon Mosby mud volcano (HMMV). In addition, one reference site well away from the seep sites, but from similar water depths and the same general hydrographic setting was occupied for comparison. The HMMV is located at 1265 m water depth on the SW Barents Sea continental slope. Distinct living foraminiferal associations at the HMMV are linked to specific sedimentary, microbial, and macrofaunal habitats. In the center of the crater, and in crater areas completely covered by bacterial mats, Cassidulina reniforme is the only, albeit rare, living species. Below the top few millimeters, sediments are anoxic and devoid of living specimens. At the rim of the mud volcano, at sites densely populated by pogonophoran tube worms, three benthic foraminiferal associations are found; (i) a Fontbotia wuellerstorfi–Lobatula lobatula association living attached to the upper parts of pogonophoran tubes, which protrude into oxic water, (ii) a diverse Cassidulina neoteretis association populating dysoxic sediments of the surface centimeter, and (iii) a species-poor Bolivina pseudopunctata association colonizing the subsurface sediments down to four centimeters. Generally, we did not find endemic or seep indicative species or associations at the HMMV. However, the HMMV live faunas dominated by B. pseudopunctata are not found at the reference site nor are they described from comparable water depths and environments without gas seepages from the Norwegian-Greenland Seas.In the center and outer rim of the mud volcano, a C. neoteretis–Reophax guttifer dead association, similar to the one at the reference site, characterizes an assemblage of strongly corroded and partly displaced tests. At bacterial mat sites, a C. reniforme dead association corresponds to the living one. Thus both the living and the dead associations are indicative of a specific bacterial mat environment at the HMMV.     

Discovery of prolific natural methane seeps at Gullfaks, northern North Sea

The Gullfaks and Kvitebjørn fields are located on the North Sea Plateau (135 m water depth), and on an ancient beach (135–190 m) deposited during the sea-level lowstand during the Last Glacial Maximum (LGM). There are several continuous seeps of mainly methane gas, where large patches of Beggiatoa bacterial mats occur. The ‘Heincke’ seep area, which is named after the German research vessel Heincke, has been targeted by scientists studying seep-associated processes and microbiology. The Gullfaks area has a long history of shallow gas and seepage. In 1980, well no. 34/10–10 had a blowout from a reservoir located 230 m below seafloor. The active Heincke seep location has no topographic expression, probably because the seabed consists of dense sand and gravel. Extensive bacterial mats (Beggiatoa sp.) are found on the seafloor at this seep site. Organisms such as hermit crabs were seen ingesting pieces of such mat, indicating ‘trophic bypass,’ where carbon derived directly from seeping methane is evidently feeding directly into higher trophic organisms. Ongoing and future research at this seep location in the North Sea can answer some important questions on the environmental impact of natural methane seeps on continental shelves.     

Isotope ratios of Pb/Pb in eelgrass, Zostera marina, indicate sources of Pb in an estuary

We deployed hydroponic eelgrass, Zostera marina L., to test its use as a sentinel accumulator and indicator of the source of water-borne lead (Pb) contamination in the marine environment. Eelgrass was deployed unrooted in the water column in the vicinity of the Portsmouth Naval Shipyard, located on Seavey Island in Portsmouth Harbor of New Hampshire and Maine, offshore from seepage sites near the Jamaica Island landfill (JIL). Deployed eelgrass, water samples from seepage sites, and sediment from the deployment sites were analyzed for Pb concentration and stable Pb isotopic composition. Isotopic composition was used to distinguish recent anthropogenic Pb inputs from background Pb in the estuary. Isotope ratios indicated that two groundwater seeps were a source of recent anthropogenic Pb (i.e. industrial Pb from the landfill) to Jamaica Cove. The eelgrass that showed the strongest presence of industrial Pb (having the lowest ²⁰⁶Pb/²⁰⁷Pb) was closest to a high volume seep that drained from the JIL and had a similar isotope signature as well as elevated Pb concentrations. These data confirm a source of water-borne industrial Pb in the estuary and show that eelgrass can function as a sentinel accumulator of Pb from anthropogenic sources.     

Community structure of infaunal macrobenthos around vestimentiferan thickets at the San Clemente cold seep,NE Pacific

The San Clemente cold seep lies within 100–200 km of other reducing habitats in the NE Pacific, offering an opportunity to compare diversity and species overlap among reducing habitats (i.e. whale‐, kelp‐, and wood‐falls) at similar depths within a single region. Video observations from the research submersible Alvin at the San Clemente seep (1800 m depth) indicated clumps (‘thickets’) of vestimentiferans distributed as meter‐scale patches interspersed with vesicomyid clam beds and black sediments. Sediment‐core samples were collected at distances of 0 to 80–200 m along randomly oriented transects radiating outward from vestimentiferan thickets to evaluate changes in macrofaunal community structure from thickets into the background community. Macrofaunal abundance was elevated at distances of 0–1 m compared to 80–200 m (i.e. the ‘background’ community). The tube‐building frenulate worms Siboglinum spp., along with peracarid crustaceans, dominated sediments within 1 m of vestimentiferan thickets. Species diversity was depressed within 1 m of thickets but with high rates of species accumulation, suggesting that seep sites greatly increase sediment heterogeneity and facilitate colonization by non‐background macrofaunal species. Stable isotope data indicate chemosynthetic nutrition for some dominant macrofaunal species within 1 m of tubeworm thickets. The macrofaunal community near vestimentiferan thickets in San Clemente seep contains intermediate levels of species richness and diversity compared to other deep‐sea seep areas in the northeast Pacific. There was low species overlap between the San Clemente seep macrofauna and communities in reducing habitats near wood‐, whale‐, and kelp‐falls at similar depths within the region, suggesting that seeps harbor a distinct infaunal community.     

Biologic and geologic characteristics of cold seeps in Monterey Bay, California

Cold seep communities discovered at three previously unknown sites between 600 and 1000 m in Monterey Bay, California, are dominated by chemoautotrophic bacteria (Beggiatoa sp.) and vesicomyid clams (5 sp.). Other seep-associated fauna included galatheid crabs (Munidopsis sp.), vestimentiferan worms (Lamellibrachia barhami?), solemyid clams (Solemya sp.), columbellid snails (Mitrella permodesta, Amphissa sp.), and pyropeltid limpets (Pyropelta sp.). More than 50 species of regional (i.e. non-seep) benthic fauna were also observed at seeps. Ratios of stable carbon isotopes (δ¹³C) in clam tissues near 36‰ indicate sulfur-oxidizing chemosynthetic production, rather than non-seep food sources, as their principal trophic pathway. The “Mt Crushmore” cold seep site is located in a vertically faulted and fractured region of the Pliocene Purisima Formation along the walls of Monterey Canyon ( 635 m), where seepage appears to derive from sulfide-rich fluids within the Purisima Formation. The “Clam Field” cold seep site, also in Monterey Canyon ( 900 m) is located near outcrops in the hydrocarbon-bearing Monterey Formation. Chemosynthetic communities were also found at an accretionary-like prism on the continental slope near 1000 m depth (Clam Flat site). Fluid flow at the “Clam Flat” site is thought to represent dewatering of accretionary sediments by tectonic compression, or hydrocarbon formation at depth, or both. Sulfide levels in pore waters were low at Mt Crushmore (ca 0.2 mM), and high at the two deeper sites (ca 7.011.0 mM). Methane was not detected at the Mt Crushmore site, but ranged from 0.06 to 2.0 mM at the other sites.     

Seep mounds on the Southern Vøring Plateau (offshore Norway)

Multidisciplinary study of seep-related structures on Southern Vøring Plateau has been performed during several UNESCO/IOC TTR cruises on R/V Professor Logachev. High-resolution sidescan sonar and subbottom profiler data suggest that most of the studied fluid discharge structures have a positive relief at their central part surrounded by depression. Our data shows that the present day fluid activity is concentrated on the top of these “seep mounds”. Number of high hydrocarbon (HC) gas saturated sediment cores and 5 cores with gas hydrate presence have been recovered from these structures. δ¹³C of methane (between −68 and −94.6‰ VPDB) and dry composition of the gas points to its biogenic origin. The sulfate depletion generally occurs within the upper 30–200 cm bsf and usually coincides with an increase of methane concentration. Pore water δ¹⁸O ranges from 0.29 to 1.14‰ showing an overall gradual increase from bottom water values (δ¹⁸O ∼ 0.35‰). Although no obvious evidence of fluid seepage was observed during the TV surveys, coring data revealed a broad distribution of living Pogonophora and bacterial colonies on sea bottom inside seep structures. These evidences point to ongoing fluid activity (continuous seepage of methane) through these structures. From other side, considerable number and variety of chemosynthetic macro fauna with complete absence of living species suggest that present day level of fluid activity is significantly lower than it was in past. Dead and subfossil fauna recovered from various seep sites consist of solemyid (Acharax sp.), thyasirid and vesicomyid (cf. Calyptogena sp.) bivalves belonging to chemosymbiotic families. Significant variations in δ¹³C (−31.6‰ to −59.2‰) and δ¹⁸O (0.42‰ and 6.4‰) of methane-derived carbonates collected from these structures most probably related to changes in gas composition and bottom water temperature between periods of their precipitation. This led us to ideas that: (1) seep activity on the Southern Vøring Plateau was started with large input of the deep thermogenic gas and gradually decries in time with increasing of biogenic constituent; (2) authigenic carbonate precipitation started at the near normal deep sea environments with bottom water temperature around +5 °C and continues with gradual cooling up to negative temperatures recording at present time.     

Characterization of hydrocarbons in a subsurface oil-rich layer in the Sargasso Sea

The hydrocarbon composition of seawater samples collected within a subsurface oil-rich layer in the southwest North Atlantic Ocean (Sargasso Sea) during February–March, 1978, has been examined in detail. Chromatograms generated through gas chromatographs/mass spectrometry (GC/MS) analyses of saturated and aromatic hydrocarbons are characterized by a narrow unresolved envelope (UCM or unresolved complex mixture) containing isoprenoids as major resolved peaks, suggesting a petroleum source which has undergone moderate biodegradative weathering. Distributions of terpanes, steranes and polycyclic aromatic hydrocarbons corroborate the inferred fossil origin. Stable carbon isotopic compositions (δ¹³C) suggest that the source of these hydrocarbons is enriched in ¹³C in comparison with most petroleums. The results support the previous suggestions (Harvey et al., 1979) that this layer is part of a massive submarine oil seep originating somewhere on the Venezuelan shelf, although its origin cannot be attributed to seepage of a specific oil formation.     

Community structure and nutrition of deep methane-seep macrobenthos from the North Pacific (Aleutian) Margin and the Gulf of Mexico (Florida Escarpment)

Methane seeps occur at depths extending to over 7000 m along the world's continental margins, but there is little information about the infaunal communities inhabiting sediments of seeps deeper than 3000 m. Biological sampling was carried out off Unimak Island (3200–3300 m) and Kodiak Island (4500 m) on the Aleutian margin, Pacific Ocean and along the Florida Escarpment (3300 m) in the Gulf of Mexico to investigate the community structure and nutrition of macrofauna at these sites. We addressed whether there are characteristic infaunal communities common to the deep‐water seeps or to the specific habitats (clam beds, pogonophoran fields, and microbial mats) studied here, and ask how these differ from background communities or from shallow‐seep settings sampled previously. We also investigated, using stable isotopic signatures, the utilization of chemosynthetically fixed and methane‐derived organic matter by macrofauna from different regions and habitats. Within seep sites, macrofaunal densities were the greatest in the Florida microbial mats (20,961 ± 11,618 ind·m⁻²), the lowest in the Florida pogonophoran fields (926 ± 132 ind·m⁻²), and intermediate in the Unimak and Kodiak seep habitats. Seep macrofaunal densities differed from those in nearby non‐seep sediments only in Florida mat habitats, where a single, abundant species of hesionid polychaete comprised 70% of the macrofauna. Annelids were the dominant taxon (>60%) at all sites and habitats except in Florida background sediments (33%) and Unimak pogonophoran fields (27%). Macrofaunal diversity (H′) was lower at the Florida than the Alaska seeps, with a trend toward reduced richness in clam bed relative to pogonophoran field or non‐seep sediments. Community composition differences between seep and non‐seep sediments were evident in each region except for the Unimak margin, but pogonophoran and clam bed macrofaunal communities did not differ from one another in Alaska. Seep δ¹³C and δ¹⁵N signatures were lighter for seep than non‐seep macrofauna in all regions, indicating use of chemosynthetically derived carbon. The lightest δ¹³C values (average of species’ means) were observed at the Florida escarpment (−42.8‰). We estimated that on average animal tissues had up to 55% methane‐derived carbon in Florida mats, 31–44% in Florida clam beds and Kodiak clam beds and pogonophoran fields, and 9–23% in Unimak seep habitats. However, some taxa such as hesionid and capitellid polychaetes exhibited tremendous intraspecific δ¹³C variation (>30‰) between patch types. Overall we found few characteristic communities or features common to the three deep‐water seeps (>3000 m), but common properties across habitats (mat, clam bed, pogonophorans), independent of location or water depth. In general, macrofaunal densities were lower (except at Florida microbial mats), community structure was similar, and reliance on chemosynthesis was greater than observed in shallower seeps off California and Oregon.     

A contribution to the reconstruction of Miocene seepage from authigenic carbonates of the northern Apennines (Italy)

Authigenic carbonates from outcrops of the northern Apennines consist of small and irregular lenses and exhibit numerous features indicative of cold-seep settings. Detailed petrographic, mineralogical and geochemical studies from two Miocene deposits are presented. The first carbonate outcrop, named Fosso Riconi, is located in the foredeep basin of the Apenninic chain, whereas the second deposit represents a satellite basin called Sarsetta. The stable isotope data from specific carbonate minerals show a wide range of values well known from other palaeoseeps of the Apennine Mountains. The majority of seep carbonates are formed by low-Mg calcite and ankerite. Those minerals have δ¹³C values between ?7 and ?23‰ V-PDB, suggesting variable amounts of carbonate derived from oxidized methane, seawater (dissolved inorganic carbon) and sedimentary organic matter. Dolomite samples have the lowest δ¹³C values (?30.8 to ?39.0‰ V-PDB), indicating methane as the main carbon source. The findings suggest an evolutionary formation of the seeps and development of authigenic carbonates influenced by the activity of chemosynthetic organisms, of which large lucinid clams are preserved. Bioirrigation by the clams controlled the sediment–water exchange, and is here considered as an explanation for the anomalous Mg content of the calcite. We hypothesize that the seep carbonates were formed during periods of active methane-rich seepage, whereas during periods of slow seepage carbonate formation was reduced. Despite different geological settings, the two examined deposits of Sarsetta and Fosso Riconi show similar features, suggesting that a common pattern of fluid circulation played a major role in carbonate formation at both seep sites.     

Geologic control of natural marine hydrocarbon seep emissions, Coal Oil Point seep field, California

High-resolution sonar surveys, and a detailed subsurface model constructed from 3D seismic and well data allowed investigation of the relationship between the subsurface geology and gas-phase (methane) seepage for the Coal Oil Point (COP) seep field, one of the world’s largest and best-studied marine oil and gas seep fields, located over a producing hydrocarbon reservoir near Santa Barbara, California. In general, the relationship between terrestrial gas seepage, migration pathways, and hydrocarbon reservoirs has been difficult to assess, in part because the detection and mapping of gas seepage is problematic. For marine seepage, sonar surveys are an effective tool for mapping seep gas bubbles, and thus spatial distributions. Seepage in the COP seep field occurs in an east–west-trending zone about 3–4 km offshore, and in another zone about 1–2 km from shore. The farthest offshore seeps are mostly located near the crest of a major fold, and also along the trend of major faults. Significantly, because faults observed to cut the fold do not account for all the observed seepage, seepage must occur through fracture and joint systems that are difficult to detect, including intersecting faults and fault damage zones. Inshore seeps are concentrated within the hanging wall of a major reverse fault. The subsurface model lacks the resolution to identify specific structural sources in that area. Although to first order the spatial distribution of seeps generally is related to the major structures, other factors must also control their distribution. The region is known to be critically stressed, which would enhance hydraulic conductivity of favorably oriented faults, joints, and bedding planes. We propose that this process explains much of the remaining spatial distribution.     

Isolation and characterization of polymorphic microsatellite loci in large yellow croaker, Larimichthys crocea

An (AC)n-microsatellite-enriched library for Larimichthys crocea was constructed in this study. Primers for fifty simple sequence repeat (SSR) loci were synthesized and genotyped on 30 L. crocea individuals from Guanjingyang wild population (WP) in Fujian Province and 38 individuals from Ningbo cultured population (CP) in Zhejiang Province. Only 21 loci were successfully amplified and polymorphic in two populations. In WP, the observed heterozygosity (H_O ) ranged from 0.233 to 0.900 and the expected heterozygosity (H_E ) ranged from 0.326 to 0.893, with an average of 7.8 alleles/locus, the polymorphism information content (PIC) ranged from 0.283 to 0.866 (mean 0.731). In CP, the H O ranged from 0.189 to 0.892 and the H E ranged from 0.333 to 0.800, with an average of 4.4 alleles/locus. The probability test showed significant departures from HWE in 9 and 2 of the 21 loci in WP and in CP, respectively. Deficiency of heterozygotes at four loci showed the presence of null alleles (P <0.01). The PIC of 20 microsatellite loci in WP were greater than 0.50. Overall, these novel markers are potentially useful for the study of population genetics, construction of genetic linkage and quantitative trait loci maps in large yellow croaker.