Sexual size dimorphism in calanoid copepods (Centropagidae) from Patagonia (Argentina)

Calanoid copepods of the genus Boeckella and Parabroteas (P. sarsi) are dominant in zooplankton communities of Patagonian lakes and ponds. This study addresses the occurrence of sexual size dimorphism in calanoid copepods of the genus Boeckella and in the monospecific genus Parabroteas occurring in 12 lakes and ponds of Patagonia (Argentina). The morphometric analysis performed showed that in all the species studied the female is larger than the male, although the difference in size among sexes was found to be variable between species. Interestingly, all species showed significant intraspecific stability in their sexual size dimorphism despite potential differences in their environments regarding predation pressure, environmental stability (permanent or temporary waters) and altitude distribution of populations. Finally, we discuss the potential implications of sexual dimorphism in terms of resource use and vulnerability to predation among other environmental forces which may play a role in promoting larger female to male size.     

Distribution of fish in tributaries of the lower Taieri/Waipori rivers,South Island,New Zealand

The distribution of fish within eight small streams feeding into the lower Taieri and Waipori Rivers on the east coast of New Zealand's South Island was examined. A total of eight native and two introduced species were recorded. Eels (Anguilla spp.) and giant kokopu (Galaxias argenteus Gmelin) were the most widely distributed species being located in all streams surveyed. Common bullies (Gobiomorphus cotidianus McDowall) and brown trout (Salmo trutta Linnaeus) were also widely distributed being detected in seven and six of the streams respectively. Three streams of potential conservation significance were identified. These were Picnic Gully Creek which contained a significant population of banded kokopu (Galaxias fasciatus Gray), a Category C threatened species, and Cullens and Alex Creeks which contained significant populations of giant kokopu, a Category B threatened species. The population of giant kokopu in Cullens and Alex Creeks currently represents the largest known population of this species on the east coast of New Zealand (excluding Southland). It has been suggested that brown trout may influence the distribution of native galaxiids. The longitudinal distribution of giant kokopu and brown trout in streams was examined at night using a continuous spotlight sampling approach. Distributions of these two species rarely overlapped at a local scale. Coarse habitat use data indicated that brown trout regularly occupied a variety of habitat types including modified agricultural channels. In contrast, giant kokopu rarely used agricultural channels being predominantly located in pool habitats.     

Spread and status of seven submerged pest plants in New Zealand lakes

The distribution of seven submerged aquatic pest plants is reported. Lake vegetation surveys recorded pest plants in 27.9% of 344 lakes, with two species co‐occurring in 5.8%, and three species in 2.6% of lakes. Egeria densa was most frequent (15.4% of lakes), followed by Ceratophyllum demersum (9.0%), Lagarosiphon major (7.3%), and Utricularia gibba (5.5%). Spread since 2000 has continued for five pest plants, with 34 lakes invaded by U. gibba over 2004–08 alone. Early regional sites in proximity to human population centres were likely plant liberations and numerous potential founder colonies remain in garden ponds. Human activities were important for inter‐lake dispersal, with the exception of bird‐dispersed U. gibba. Significant lake associations between pest plants, and with presence of six exotic fish species, suggest common dispersal pathways and similar introduction risks. Therefore, predictions of future spread should be possible based on sources, dispersal pathways, and identifying key risk factors for lakes.     

Biotic variation in coastal water bodies in Sussex, England: Implications for saline lagoons

Coastal water bodies are a heterogeneous resource typified by high spatial and temporal variability and threatened by anthropogenic impacts. This includes saline lagoons, which support a specialist biota and are a priority habitat for nature conservation. This paper describes the biotic variation in coastal water bodies in Sussex, England, in order to characterise the distinctiveness of the saline lagoon community and elucidate environmental factors that determine its distribution. Twenty-eight coastal water bodies were surveyed for their aquatic flora and invertebrate fauna and a suite of exploratory environmental variables compiled. Ordination and cluster analyses were used to examine patterns in community composition and relate these to environmental parameters. Biotic variation in the coastal water body resource was high. Salinity was the main environmental parameter explaining the regional distribution of taxa; freshwater and saline assemblages were evident and related to sea water ingress. Freshwater sites were indicated by the plant Myriophyllum spicatum and gastropod mollusc Lymnaea peregra, while more saline communities supported marine and brackish water taxa, notably a range of chlorophytic algae and the bivalve mollusc Cerastoderma glaucum. Site community differences were also related to bank slope and parameters describing habitat heterogeneity. A saline lagoon community was discerned within the matrix of biotic variation consisting of specialist lagoonal species with associated typically euryhaline taxa. For fauna, the latter were the molluscs Abra tenuis and Hydrobia ulvae, and the crustaceans Corophium volutator and Palaemonetes varians, and for flora they were the algae Ulva lactuca, Chaetomorpha mediterranea, Cladophora spp. and Enteromorpha intestinalis. One non-native polychaete species, Ficopomatus enigmaticus, also strongly influenced community structure within the lagoonal resource. The community was not well defined as specialist and associated taxa were distributed throughout the spectrum of sites surveyed. Implications for the identification and conservation of saline lagoons are discussed.     

A new species of Boeckella (Copepoda: Calanoida) from northland,New Zealand

Boeckella tanea, n.sp. is described. It shows similarities to B. propinqua and B. delicata, and appears to be confined to lakes and ponds in Northland, New Zealand.     

Prey availability and diet of juvenile brown trout (Salmo trutta) in relation to riparian willows (Salix‐spp.) in three New Zealand streams

Macroinvertebrate benthos and drift and the diet of juvenile brown trout (Salmo trutta) were investigated in willowed and non‐willowed sections of three New Zealand streams during summer. The abundance and biomass of the principal macroinvertebrate taxa in the benthos and daytime drift differed in relation to riparian willow (Salix spp.) density, but the trends were not consistent across all three streams. Crustacea, Ephemeroptera, Trichoptera, and Diptera comprised a major proportion of the diet of juvenile trout. Diets of trout from non‐willowed and willowed sections were dissimilar in three of five pair‐wise comparisons. In all three streams, juvenile trout fed selectively, with the amphipod Paracalliope fluviatilis, ephemeropteran Deleatidium, and trichopterans Aoteapsyche and Hydrobiosidae being the preferred prey. Their avoidance of the gastropod Potamopyrgus antipodarum, trichopteran Oxye‐thira albiceps, coleopteran Hydora, and drift of terrestrial origin appeared to occur in all streams. Total abundance and biomass of invertebrates drifting during the day described the potential prey available to juvenile brown trout better than did the abundance and biomass of benthic invertebrates.     

The planktonic algae of Auckland sewage treatment ponds

This list and the notes on each species have been compiled from a study of ponds at sewage treatment plants near Auckland City between 1962 and 1965. It is intended to serve as a guide to the types of phytoplankton found in this specialised habitat and as an addition to the List of Fresh‐Water Algae of New Zealand (Chapman et al 1957). Keys to the genera and selected species are given.     

Germination of phytoplankton resting cells from surface sediments in two areas of the Southern Chinese coastal waters

To understand the role of phytoplankton resting cells in the outbreak of algal blooms, particularly harmful algal blooms, surface sediments were collected monthly from April 2007 to March 2008 from two bays near the international ports in the Southern Chinese coastal waters. Sieved sediments were incubated for 20 and 40 days, and germinated vegetative cells were observed. Altogether, 97 taxa were recorded, of which 50 were diatoms and 35 dinoflagellates. Vegetative cells of cyanobacteria, chlorophytes, dictyophytes, euglenophytes, haptophytes, and raphidophytes were also observed. Centric diatoms such as Chaetoceros, Melosira, Skeletonema, and Thalassiosira dominated. Scrippsiella, Gymnodinium, and Alexandrium were common dinoflagellate taxa. Diatom spores germinated in samples from all seasons but were abundant in the autumn and winter samples. Low numbers of dinoflagellate cells germinated in the winter samples. The nanophytoplankton taxa, Gymnodinium corii and Chrysochromulina sp., which have not been recorded in the previous phytoplankton surveys, were abundant, suggesting either their new appearance in the water column or perhaps that they were overlooked in routine phytoplankton monitoring due to their small sizes. Vegetative cells of harmful or potentially harmful taxa were germinated, and some of them such as Amphidinium, Gambierdiscus, Ostreopsis, and Coolia have not previously been reported in the study area. Based on the results of the incubation of sediments from the two bays near the international ports, it is suggested that international shipping increases the risk of the introduction of new phytoplankton species and thus promotes the incidence of harmful algal blooms.     

Nocturnal fish utilization of a subtropical mangrove‐seagrass ecotone

Whereas diel fish migration between mangrove and seagrass habitats has been recognized for decades, quantitative studies have focused mainly on diurnal patterns of fish distribution and abundance. In general, previous studies have shown that fish abundances decline with increasing distance from mangroves; however, evidence for such a pattern at night, when many fishes are actively feeding, is scarce. The present study is the first to report nocturnal fish abundances along a continuous distance gradient from mangroves across adjacent seagrass habitat (0–120 m). Here, we used nocturnal seine sampling to test the null hypothesis (based on diurnal studies and limited nocturnal work) that fish abundance would decrease with increasing distance from shoreline. We focused on species and life‐stage‐specific abundance patterns of Lutjanus griseus, Sphyraena barracuda, Archosargus rhomboidalis, and Haemulon sciurus. Results indicated that assemblage composition and structure differed significantly by season, likely influenced by temperature. However, within each season, the fish habitat use pattern at both the assemblage and species‐specific level generally failed to support our working null hypothesis. Species‐specific analyses revealed that, for most species and life‐stages examined, nocturnal abundance either did not change with distance or increased with distance from the mangrove‐seagrass ecotone. Our results suggest that analyses where taxa are grouped to report overall patterns may have the potential to overlook significant species‐ and stage‐specific variation. For fishes known to make nocturnal migrations, we recommend nocturnal sampling to determine habitat utilization patterns, especially when inferring nursery value of multiple habitats or when estimating fish production.     

Notes on the presence of the brown mudfish (Neochanna apoda günther) on the west coast of the south Island of New Zealand

Two visits to the West Coast revealed that Neochanna apoda Giinther is present in six clearly defined types of habitat examined between Oparara and Whataroa.

The location of habitats varied from heavily forested country to open pakihi bog, between sea level and 200 m. A Neochanna apoda habitat was generally uninhabited by any other species of fish; occasionally short‐finned eels (Anguilla australis) and, once, banded kokopu (Galaxias fasciatus) were present. An association with freshwater crayfish (Paranephrops planifrons) was often noted.

Neochanna apoda was found in all stages of development from fry to adults over 150 mm in length, and all size ranges were present in some places.     

Macroparasites of angelfish Brama brama (Bonnaterre, 1788) in the southern Benguela Current ecosystem

The angelfish Brama brama is a mesopelagic species distributed circumglobally in temperate to warm-temperate waters, including continental-shelf-edge and upper-slope waters of the Benguela Current ecosystem. Little is known about the parasite assemblage of Benguela B. brama, with only three parasite taxa having previously been documented from this species in the southern Benguela. This study describes the macroparasites recorded from 35 B. brama collected during research surveys off the west coast of South Africa in 2015 and 2016. A total of six macroparasite taxa were documented, including the nematode Anisakis pegreffii, the copepod Hatschekia conifera, the cestode Hepatoxylon trichiuri, an acanthocephalan from the genus Rhadinorhynchus, a monogenean from the family Diclidophoridae, and an unidentified species. Three of these (He. trichiuri, Rhadinorhynchus sp. and the unidentified species) had not previously been found to infect B. brama. The most prevalent macroparasite taxa were A. pegreffii (94%), the unidentified species (71%) and Ha. conifera (60%). Two of the parasites, Ha. conifera and He. trichiuri, showed seasonal variation in infection, and infection with the latter was positively correlated with host length. These findings increase our knowledge of B. brama biology and contribute to our understanding of the biodiversity of the southern Benguela ecosystem.     

Conservation status of New Zealand freshwater fish, 2009

The threat status of 74 freshwater and estuarine fish present in New Zealand was determined. Fifty-one native taxa were ranked of which 67% were considered Threatened or At Risk. A single species was classified as Extinct, the New Zealand grayling, which has not been observed since the 1920s. Four taxa were classified in the highest threat category, Nationally Critical, and a further 10 taxa as Threatened (Nationally Endangered or Nationally Vulnerable). Twenty taxa were ranked in the At Risk group with the majority ranked as Declining. Endemic galaxiids (Galaxiidae) dominated the Threatened and At Risk taxa. The majority (68%) belonged to the Galaxias genus, comprising 81% of recognised taxa in this genus and all five species in the genus Neochanna were also ranked as Threatened or At Risk. In addition to 51 native taxa, a further three fish species were considered colonists and 20 introduced species were classified as naturalised, although two of these are considered rare. The majority of the Threatened species occur in the Canterbury and Otago regions where a suite of rare non-migratory galaxiids exist. Threat mechanisms that were identified as causal in the decline of freshwater fish species were the impact of introduced fish species, declining water quality, effects of water abstraction, loss of habitat via land-use change and land-use activities, and river modifications.     

Development of habitat models for Nephtys species (Polychaeta: Nephtyidae) in the German Bight (North Sea)

The aim of the study was the development of habitat models for Nephtys species (Polychaeta: Nephtyidae). The investigation area was the German Bight, the southeastern part of the North Sea. Models were developed based on field data collected between 2000 and 2006. In addition, data on environmental variables were retrieved from long-term monitoring data sets and from the sediment map by Figge [Figge, K., 1981. Nordsee. Sedimentverteilung in der Deutschen Bucht. Map No. 2900. Publisher: Deutsches Hydrographisches Institut, Hamburg]. The statistical modelling technique used was multivariate adaptive regression splines (MARS). Models were fitted individually for each species. Evaluation of predictive discrimination and predictive accuracy of the developed models was by calculation of the area under the receiver operating curve (AUC) or sensitivity and specificity, respectively. Habitat models with best predictive fit were selected for the presentation of habitat suitability maps.Six Nepthys species were found: Nephtys assimilis, N. caeca, N. cirrosa, N. hombergii, N. incisa and N. longosetosa. N. hombergii was most common whereas N. incisa and N. longosetosa were rare. Habitat preferences varied considerably among the species. For all investigated Nephtys species except N. longosetosa a habitat model could be developed based on four predictor variables. The habitat models with best predictive fit were those for N. cirrosa and N. hombergii. The N. caeca habitat model was of limited predictive accuracy and only accept predictive discrimination. The number of predictors as well as the relative importance of the respective predictors in the model varied among the different species. Direct comparison of most suitable habitats for the different species based on modelling revealed that in the mostly sandy regions parallel to the German coast in water depths up to 20 m an overlap between N. caeca, N. hombergii and N. cirrosa exists. In the deeper central German Bight with mostly fine sands with increased mud contents N. hombergii, N. assimilis and, at least partially and rare in numbers, N. incisa co-occur. It can be concluded that important sediment characteristics like grain size median and mud content as well as water depth and mean salinity are useful parameters to describe the habitat requirements of most Nepthys species in the German Bight. However, additional variables need to be incorporated into such analyses.     

To what extent are the characteristics of nematode assemblages in nearshore sediments on the west Australian coast related to habitat type, season and zone?

This study has determined the ways in which the characteristics of the nematode assemblages in nearshore marine waters along the microtidal lower west coast of Australia are influenced by habitat type, time of year and shore-perpendicular zones. The habitat types (1, 2 and 6), which had previously been identified on the basis of a suite of enduring environmental characteristics, could be broadly described as highly sheltered from wave activity and containing dense seagrass (1), moderately sheltered from wave activity with sparse seagrass (2) and relatively exposed to wave activity with no seagrass (6). Sampling in five consecutive seasons yielded 15 751 nematodes representing 75 species, of which, at present, only three can be referred to described species. The number of species and densities in habitat type 1, and particularly those in its subtidal zone (C), were far greater than those in the other two habitat types. Both of these biotic variables underwent marked seasonal changes, declining to low levels during winter. The compositions of the assemblages differed significantly among the three habitat types, with the differences between habitat types 1 and 6 being particularly marked. Species of Paracomesoma, Dichromadora, Marylynnia, and Pomponema, which are assumed to feed primarily on benthic diatoms, were particularly abundant at the most sheltered habitat type, whereas those of Gonionchus, Theristus and Bathylaimus, which are assumed to be deposit feeders, were relatively abundant at the most highly exposed habitat type. The compositions of the assemblages differed among seasons and were most discrete in spring, due to marked increases in the densities of certain species. However, differences in the compositions in the different zones of each habitat type were relatively small, presumably reflecting the presence of only a small tide in the region.     

Regime shifts between clear and turbid water in New Zealand lakes: Environmental correlates and implications for management and restoration

We reviewed lakes in New Zealand reported to have undergone regime shifts between macrophyte‐dominated clear water states and de‐vegetated, turbid states. Regime‐shifting lakes (RSLs) occurred along a wide latitudinal gradient. We obtained catchment land‐use data as well as data on the occurrences of introduced (non‐indigenous) macrophytes and herbivorous and benthivorous fish for the 37 RSLs and for 58 lakes with similar maximum depths and climates, but which had not been reported to have undergone regime shifts. All RSLs had a maximum depth <20 m and mean annual surface air temperature between 9 and 16°G Regime shifts were positively related to the percentage of the catchment in pasture and negatively related to the percentage of the catchment in forest. The occurrences of the introduced macrophyte Egeria densa and the introduced fish, Ameiurus nebulosus (catfish), Carassius auratus (goldfish), Scardinius erythrophthalmus (rudd), Cyprinus carpio (koi carp), and Tinca tinca (tench), were significantly correlated to regime shifts in lakes. Although the presence of other introduced aquatic macrophytes was not significantly correlated with RSLs, the number of exotic fish taxa present in lakes was strongly positively correlated with increasing prevalence of regime shifts. The strength of the correlations between land use and introduced species versus regime shifts illustrates a number of factors which could be managed to reduce the susceptibility of lakes to regime shifts and to restore lakes that have become de‐vegetated. Our findings also suggests that regime shifts in lakes were unlikely to have been common in New Zealand lakes before anthropogenic deforestation and introductions of introduced aquatic taxa.     

Moina sp. (cladocera: Moinidae) in a sewage plant,wellington, referred to moina tenuicornis sars, 1896 (note)

A species of Moina from sewage ponds at Glenside, Wellington, New Zealand, is identifiable with Moina tenuicornis Sars, 1896, and distinguishable from Moina australiensis Sars, 1896 sensu stricto, in having rectangular sculpturing on the ephippium, ungrouped setae on the hind margin of the carapace, and in lacking a permanent supra‐ocular depression. Because of wide variation in some diagnostic characters, possibly both taxa are conspecific.

Some physical and chemical characteristics of the habitat are tabulated, since little is known of the ecological requirements of these morphologically similar species. Using mean values as a guide, the Glenside population of Moina tenuicornis favours a temperature in the vicinity of 20°c, a very slightly alkaline pH, a dissolved oxygen content in excess of 6mg/litre, a dissolved solid content of about 270 mg/litre, of which about half is organic and exerts a BOD5 of about 60 mg/litre, and suspended organic solids of about 150 mg/litre.     

热带西太平洋Y3和M2海山区网采浮游植物群落结构特征

研究了热带西太平洋雅浦Y3海山冬季和马里亚纳M2海山春季网采浮游植物群落结构,对调查区浮游植物的物种组成、优势种类、细胞丰度以及多样性指数进行了分析。结果表明,两个海山区共鉴定浮游植物4门50属219种,其中硅藻门30属106种,甲藻门17属112种,蓝藻门1属2种,金藻门2属3种。两个航次研究区浮游植物优势种均以链状硅藻如根管藻(Rhizosolenia)、半管藻(Hemiaulus)和角毛藻(Chaetoceros)等属的种类为主,此外太阳漂流藻(Planktoniella sol)、铁氏束毛藻(Trichodesmium thiebautii)以及部分角藻(Ceratium)物种优势度也比较明显。Y3海山区浮游植物细胞丰度介于1.60～16.61 cells/L,平均值为5.02 cells/L; M2海山区浮游植物细胞丰度介于1.36～10.20 cells/L,平均值为4.12cells/L。两个海山区浮游植物细胞丰度的分布趋势均受硅藻影响较大,甲藻细胞丰度相对较低。在属的水平上,角毛藻、根管藻、角藻和半管藻等属的细胞丰度对两个海山区浮游植物总细胞丰度的贡献较大。多样性指数方面, Y3海山区浮游植物群落香农-威纳指数H′(shannon-wiener index)介于3.95～4.69,平均值为4.30; M2海山区浮游植物群落香农-威纳指数介于3.23～4.46,平均值为3.83。两个海山区浮游植物群落多样性指数均处于较高水平,但站位间的变化不明显。目前,关于热带西太平洋海山区浮游植物群落结构的研究还非常缺乏,亟需后续研究的补充。     

Use of submerged aquatic vegetation as habitat by young-of-the-year epibenthic fishes in shallow Maine nearshore waters

Epibenthic fishes were collected with daytime beam trawl tows (n = 1713) in three shallow (<10 m) habitats of submerged aquatic vegetation (SAV), Zostera marina (eelgrass), Laminaria longicruris (kelp), Phyllophora sp. (algae), and unvegetated sandy/mud areas. We divided the Maine coast into three broad zones based upon geological features and sampled over five consecutive years; during April–November 2000 in the mid coast, in 2001 and 2002 along the south coast and in 2003 and 2004 along the eastern Maine coast. We quantified habitat use by eight economically important fish species (Gadus morhua, Microgadus tomcod, Pollachius virens, Urophycis chuss, Urophycis tenuis, Osmerus mordax, Tautogolabrus adspersus, and Pseudopleuronectes americanus) and 10 other common epibenthic species (n = 18 571). We identified the physical and biological variables most important in discriminating between habitats with and without individual fish species. Logistic regression models based on nearshore habitat characteristics were developed to predict the distribution of these species along the three zones representing broad geological regions of the Maine coast. Logistic regression models correctly classified individual fish species 58.7–97.1% of the time based on the temporal and physical habitat variables (month, temperature, salinity, and depth) and the presence–absence of submerged aquatic vegetation (Zostera, Laminaria, or Phyllophora). Overall fish presence and economically important fish presence were correctly classified 61.1–79.8% and 66.0–73.6% of the time, respectively. The Maine shallow water fish community was composed primarily of young-of-the-year and juvenile fishes with all habitats functioning as facultative nursery areas. Presence of most fish species was positively associated with Zostera, Laminaria, and to a lesser extent, Phyllophora. This study provides direct evidence of shallow waters of the Gulf of Maine as critical facultative nursery habitat for juvenile G. morhua, M. tomcod, P. virens, U. tenuis, U. chuss, T. adspersus, O. mordax and P. americanus, and many ecologically important species.     

Benthic macrofauna–habitat associations in Willapa Bay, Washington, USA

Estuary-wide benthic macrofauna–habitat associations in Willapa Bay, Washington, United States, were determined for 4 habitats (eelgrass [Zostera marina], Atlantic cordgrass [Spartina alterniflora], mud shrimp [Upogebia pugettensis], ghost shrimp [Neotrypaea californiensis]) in 1996 and 7 habitats (eelgrass, Atlantic cordgrass, mud shrimp, ghost shrimp, oyster [Crassostrea gigas], bare mud/sand, subtidal) in 1998. Most benthic macrofaunal species inhabited multiple habitats; however, 2 dominants, a fanworm, Manayunkia aestuarina, in Spartina, and a sand dollar, Dendraster excentricus, in subtidal, were rare or absent in all other habitats. Benthic macrofaunal Bray–Curtis similarity varied among all habitats except eelgrass and oyster. There were significant differences among habitats within- and between-years on several of the following ecological indicators: mean number of species (S), abundance (A), biomass (B), abundance of deposit (AD), suspension (AS), and facultative (AF) feeders, Swartz's index (SI), Brillouin's index (H), and jackknife estimates of habitat species richness (HSR). In the 4 habitats sampled in both years, A was about 2.5× greater in 1996 (a La Niña year) than 1998 (a strong El Niño year) yet relative values of S, A, B, AD, AS, SI, and H among the habitats were not significantly different, indicating strong benthic macrofauna–habitat associations despite considerable climatic and environmental variability. In general, the rank order of habitats on indicators associated with high diversity and productivity (high S, A, B, SI, H, HSR) was eelgrass = oyster ≥ Atlantic cordgrass ≥ mud shrimp ≥ bare mud/sand ≥ ghost shrimp = subtidal. Vegetation, burrowing shrimp, and oyster density and sediment %silt + clay and %total organic carbon were generally poor, temporally inconsistent predictors of ecological indicator variability within habitats. The benthic macrofauna–habitat associations in this study can be used to help identify critical habitats, prioritize habitats for environmental protection, index habitat suitability, assess habitat equivalency, and as habitat value criteria in ecological risk assessments in Willapa Bay.     

Effects of riparian manipulation on stream communities in small streams: Two case studies

The effects of riparian manipulation in New Zealand are described for two case studies, one a short‐term study of the effects of the removal of riparian vegetation on fish, and the second, a long‐term study of the effect of re‐establishment of riparian vegetation on fish and benthic macro invertebrates. The first case study was an experiment carried out between November 2001 and May 2002. Overhanging bank vegetation and in‐stream wood were removed from short reaches of a small pastoral stream that had intact riparian margins, resulting in a change in stream structure with the formation of shallow uniform runs rather than pool and riffle structures as in unmodified reaches. The removal of bank cover and consequential instream habitat changes reduced inanga (Galaxias maculatus) densities by a factor of four within months of vegetation removal, showing the importance of instream cover and habitat to inanga. Adult longfin eel (Anguilla dieffenbachii) also became less abundant in the cleared reaches, but elvers (Anguilla spp.) became more abundant. In the second case study, pastoral sections in two small streams draining from native forest catchments were restored in 1995/96 by planting riparian vegetation and preventing stock access. After 10 years, the restoration efforts had more than doubled the numbers of giant kokopu (G. argenteus) and redfin bullies (Gobiomorphus huttoni), slightly increased numbers of banded kokopu (G. fasciatus), and decreased shortfin eel (A. australis) numbers by about 40%. The macroinvertebrate communities changed so that they became more similar to those at upstream native forest reference sites. These two case studies show that riparian margins can influence the composition of the fish and macroinvertebrate communities in small streams through the effects on cover, instream habitat and probably water temperature. Riparian restoration was most effective for the fish species that use cover and pool habitat.