Diving behaviour of African penguins: do they differ from other Spheniscus penguins?

African penguins Spheniscus demersus closely resemble Magellanic S. magellanicus and Humboldt S. humboldti penguins and have similar breeding and feeding ecologies. Adults feed on pelagic schooling fish in continental shelf waters, but African penguins have been reported to have shallower dive angles and remain submerged longer for dives to a given depth than their congeners. The few data for African penguins were gathered using relatively large time-depth recorders. We measured diving behaviour of 36 African penguins provisioning small chicks at three colonies near Cape Town, South Africa. Maximum and mean dive depths were 69m and 14m respectively. Diving took place mainly during the day. Although dive depths differed between colonies, there were no significant differences in dive duration or maximum, median or mean depth. Total dive duration, descent time, bottom time, ascent time and dive angle all were strongly correlated with the maximum depth attained. The diving behaviour of African penguins is similar to that of its congeners. Diving performance probably was compromised by the data-logger used in the previous study. Comparative data from Humboldt penguins also indicate potential biases in an earlier study of this species. Care is needed when comparing the diving performance of penguins measured using different loggers.     

Tracking the Polar Front south of New Zealand using penguin dive data

Nearly 36,000 vertical temperature profiles collected by 15 king penguins are used to map oceanographic fronts south of New Zealand. There is good correspondence between Antarctic Circumpolar Current (ACC) front locations derived from temperatures sampled in the upper 150 m along the penguin tracks and front positions inferred using maps of sea surface height (SSH). Mesoscale features detected in the SSH maps from this eddy-rich region are also reproduced in the individual temperature sections based on dive data. The foraging strategy of Macquarie Island king penguins appears to be influenced strongly by oceanographic structure: almost all the penguin dives are confined to the region close to and between the northern and southern branches of the Polar Front. Surface chlorophyll distributions also reflect the influence of the ACC fronts, with the northern branch of the Polar Front marking a boundary between low surface chlorophyll to the north and elevated values to the south.     

Evaluation of the U.S. Navy’s Modular Ocean Data Assimilation System (MODAS) Using South China Sea Monsoon Experiment (SCSMEX) Data

The Navy’s Modular Ocean Data Assimilation System (MODAS) is an oceanographic tool to create high-resolution temperature and salinity on three-dimensional grids, by assimilating a wide range of ocean observations into a starting field. The MODAS products are used to generate the sound speed for ocean acoustic modeling applications. Hydrographic data acquired from the South China Sea Monsoon Experiment (SCSMEX) from April through June 1998 are used to verify the MODAS model. MODAS has the capability to provide reasonably good temperature and salinity nowcast fields. The errors have a Gaussian-type distribution with mean temperature nearly zero and mean salinity of −0.2 ppt. The standard deviations of temperature and salinity errors are 0.98°C and 0.22 ppt, respectively. The skill score of the temperature nowcast is positive, except at depth between 1750 and 2250 m. The skill score of the salinity nowcast is less than that of the temperature nowcast, especially at depth between 300 and 400, where the skill score is negative. Thermocline and halocline identified from the MODAS temperature and salinity fields are weaker than those based on SCSMEX data. The maximum discrepancy between the two is in the thermocline and halocline. The thermocline depth estimated from the MODAS temperature field is 10–40 m shallower than that from the SCSMEX data. The vertical temperature gradient across the thermocline computed from the MODAS field is around 0.14°C/m, weaker than that calculated from the SCSMEX data (0.19°–0.27 °C/m). The thermocline thickness computed from the MODAS field has less temporal variation than that calculated from the SCSMEX data (40–100 m). The halocline depth estimated from the MODAS salinity field is always deeper than that from the SCSMEX data. Its thickness computed from the MODAS field varies slowly around 30 m, which is generally thinner than that calculated from the SCSMEX data (28–46 m).     

The 1997–1998 oceanic El Niño signal along the southeast and northeast Pacific boundaries—an altimetric view

Changes in the sea surface heights (SSH) and geostrophic currents along the eastern boundaries of the Pacific (North, Central and South America) are examined during the 1997–1998 El Niño using altimeter data and proxy winds. These show that ‘symmetric’ SSH signals left the equator and propagated into both Hemispheres in two episodes, with primary periods of high equatorial SSH during May–July and October–December 1997. These are the ‘distant signals’ from the mid-latitude perspective. As the signals spread poleward in each Hemisphere, their loss of symmetry demonstrates the degree to which they were altered by topographic features, local winds, and/or local currents. The first four EOFs are calculated for 2-D SSH fields in 10° wide strips along the eastern margins (60°N–60°S) and extending out along the equator from the coast to 110°W. These account for approximately 40% of the overall variability and represent the main features of the seasonal cycles and El Niño interannual variability. Snapshots of the 2-D SSH fields depict the structure of the El Niño signal at different phases of its evolution.     

Application of a variational inverse model to determine a wintertime circulation in the East Sea of Korea

Using a variational inverse model, a wintertime ocean circulation is obtained in the East Sea of Korea bounded by transects of 34° N, 38° N in latitude and 132° E in longitude and coastlines. The hydrographic data observed by FRDAK (Fisheries Research and Development Agency of Korea) are used for determining the vertical structure and also used as data constraints. In the current study, the model was constrained only by the geostrophic balance and bottom topography. Preliminary model results showed that the vertical distributions of temperature in February 1983 were homogeneous in the coastal region south of 35°30′ N and that the extension of cold water mass along the eastern coast of Korea was noticed in the northern part of the study area. Meandering northward flows with the scale of 150 km are also observed to be dominant in the surface layer (10–100 m).     

Southern elephant seal trajectories, fronts and eddies in the Brazil/Malvinas Confluence

This study describes the association between transient, mesoscale hydrographic features along the axis of the Brazil–Malvinas Confluence, in the SW Atlantic, and the foraging behavior of 2–3-year-old (focal) juvenile southern elephant seals, Mirounga leonina, from Península Valdés, Argentina. Departing from the dominant pattern of foraging on predictable bathymetric fronts on the Patagonian shelf and slope, three females out of 12 satellite-tracked juveniles remained at the edge of young warm-core eddies and near the outer core of cold-core eddies, coinciding with the most productive areas of these temperature fronts. Seal trajectories along high-temperature gradients were always consistent with the speed and direction of surface currents inferred from the temperature distribution and confirmed by surface drifters. Movements of foraging seals were compared with those of surface drifters, coinciding in time and space and yielding independent and consistent data on regional water circulation parameters. The diving pattern recorded for one focal seal yielded shallower dives and a loose diel pattern in the eddy, and a marked diurnal cycle compatible with foraging on vertically migrating prey in the cold waters of the Malvinas Current. Pre-reproductive females that use the mesoscale fronts of the Argentine Basin as an alternative foraging area would benefit from lower competition with more experienced seals and with other top predators that reproduce along the coast of Patagonia.     

Water masses and decadal variability in the East Sea (Sea of Japan)

Water masses in the East Sea are newly defined based upon vertical structure and analysis of CTD data collected in 1993–1999 during Circulation Research of the East Asian Marginal Seas (CREAMS). A distinct salinity minimum layer was found at 1500 m for the first time in the East Sea, which divides the East Sea Central Water (ESCW) above the minimum layer and the East Sea Deep Water (ESDW) below the minimum layer. ESCW is characterized by a tight temperature–salinity relationship in the temperature range of 0.6–0.12 °C, occupying 400–1500 m. It is also high in dissolved oxygen, which has been increasing since 1969, unlike the decrease in the ESDW and East Sea Bottom Water (ESBW). In the eastern Japan Basin a new water with high salinity in the temperature range of 1–5 °C was found in the upper layer and named the High Salinity Intermediate Water (HSIW). The origin of the East Sea Intermediate Water (ESIW), whose characteristics were found near the Korea Strait in the southwestern part of the East Sea in 1981 [Kim, K., & Chung, J. Y. (1984) On the salinity-minimum and dissolved oxygen-maximum layer in the East Sea (Sea of Japan), In T. Ichiye (Ed.), Ocean Hydrodynamics of the Japan and East China Seas (pp. 55–65). Amsterdam: Elsevier Science Publishers], is traced by its low salinity and high dissolved oxygen in the western Japan Basin. CTD data collected in winters of 1995–1999 confirmed that the HSIW and ESIW are formed locally in the Eastern and Western Japan Basin. CREAMS CTD data reveal that overall structure and characteristics of water masses in the East Sea are as complicated as those of the open oceans, where minute variations of salinity in deep waters are carefully magnified to the limit of CTD resolution. Since the 1960s water mass characteristics in the East Sea have changed, as bottom water formation has stopped or slowed down and production of the ESCW has increased recently.     

The coastal ocean off Oregon and northern California during the 1997–8 El Niño

The evolution and decay of El Niño 1997–8 was observed in coastal waters off Oregon in a sequence of cruises along 44.6°N from the coast to more than 150 km offshore. Hydrographic observations were made during eleven cruises between July 1997 and April 1999 at stations on the Newport Hydrographic Line, which had been occupied regularly from 1961 to 1971. The data from the earlier decade provide a basis for defining ‘normal’ conditions and allow comparisons with the recent El Niño in terms of T, S, spiciness and geostrophic velocity. Independent of El Niño, the ocean in July 1997 was already anomalously warm offshore of 50 km and above 100 m. By September 1997 there were unambiguous indications of El Niño: isotherms and isohalines sloped down toward the coast indicating poleward flow over shelf and slope, and anomalously spicy water was present at the shelf-break. In November 1997 and February 1998 shelf-break waters were even warmer, and there was strong poleward flow inshore of 100 km, extending to depths greater than 200 m. The April 1998 section closely resembled that of April 1983 (another El Niño year) but by June 1998 the anomalies were mostly gone. November 1998 was near normal and the sections from subsequent cruises resemble the mean sections from 1961–1971.Four cruises between November 1997 and November 1998 included sampling at several latitudes between 38° and 45°N. As expected, these sections show significant alongshore gradients, but also a surprising degree of homogeneity in the anomalous features associated with El Niño (in the temperature, salinity, spiciness and geostrophic velocity fields). The anomalous signature of El Niño was stronger at its winter peak in 1998 than in 1983, but the signature in the temperature and spiciness fields, and in coastal sea level, did not persist as long as in 1983. By April 1999, the coastal ocean from 38°N to 45°N was significantly colder than it had been in April 1984.     

Sub-surface temperature oscillations and associated flow in the western Bay of Bengal

Unusual temperature variations at subsurface depths were noticed while making continuous observations (for 13 h) on temperature, salinity and currents at a point in the vicinity of river Krishna in the western Bay of Bengal. Sharp temperature oscillations recorded at four different levels between 14 and 20·1 m had an average periodicity of about 1·6 h. Similar periodicities were also observed in the case of flow components. Computed Brunt-Vaisälä frequency, vertical shear and Richardson number showed remote possibilities of vertical mixing occurring in this area. These oscillations showed features of internal waves propagating with a speed of about 13·3 cm s⁻¹ and wavelengths between 0·8 and 1·3 km and apparently generated as a result of flood current passing over a submarine obstacle in the presence of stratification.     

Observations on the ecology of deep-sea bottom-living fishes collected off northwest Africa (08°–27°N)

The ecology of bottom-living fishes was investigated from a series of collections off northwest Africa in the area 08°–27°N and 14°–30°W from sounding of 261–6059 m. The variety of sampling gear included epibenthic sledges, a semi-balloon otter trawl, benthic traps and longlines. A total of 92 operations collected more than 4600 specimens of at least 148 species. The catches of both types towed gear were shown to have a high degree of similarity, but sampled a different spectrum of species to the static baited gears. An overall consistency by latitude was found in the composition of the net catches. Despite possible indications of faunal boundaries at around 1100 m and 2100 m, the salient feature of an analysis of catch composition by sounding was the generally steady faunal change to a depth of about 3000 m. The only obvious discontinuity was evident at this level, beyond which the fish fauna was more uniform. This lack of marked species assemblages, characteristic of other regions, may result from the high primary productivity in the area. Features distinguishing the fish fauna of the area from that of the non-upwelling temperate western North Atlantic were found to be the smaller mean size of the dominant species, the abundance of bathygadine macrourids and the evident lack of the ‘bigger-deeper’ phenomenon. The relative density of fishes was estimated and shown to decrease by 2 orders of magnitude from the upper slope to 2000 m soundings. Below this the decline was less marked and relative densities of around 0.5 fish/1000 m² were maintained to at least 4000 m soundings.The abundance of slope fishes in the area was tentatively estimated to be greater than in the non-upwelling temperate western North Atlantic. Few species were abundant; only 25% were represented by more than 17 specimens. Yet the dominant family, the Macrouridae, was represented by 48% of the specimens and 18%of the species. A total of 14 species from 6 families, represented by 60 or more specimens, were examined in detail to provide information on vertical distribution, population structure, breeding biology and feeding. Niche availability and resource partitioning among co-occurring species of macrourids are briefly discussed. Station and species data are given, together with a note on the likely conspecificity of Coryphaenoides colon with C. zaniophorus.     

A deep cyclonic gyre in the Australian–Antarctic Basin

The traditional image of ocean circulation between Australia and Antarctica is of a dominant belt of eastward flow, the Antarctic Circumpolar Current, with comparatively weak adjacent westward flows that provide anticyclonic circulation north and cyclonic circulation south of the Antarctic Circumpolar Current. This image mostly follows from geostrophic estimates from hydrography using a bottom level of no motion for the eastward flow regime which typically yield transports near 170 Sv. Net eastward transport of about 145 Sv for this region results from subtracting those westward flows. This estimate is compatible with the canonical 134 Sv through Drake Passage with augmentation from Indonesian Throughflow (around 10 Sv).A new image is developed from World Ocean Circulation Hydrographic Program sections I8S and I9S. These provide two quasi-meridional crossings of the South Australian Basin and the Australian–Antarctic Basin, with full hydrography and two independent direct-velocity measurements (shipboard and lowered acoustic Doppler current profilers). These velocity measurements indicate that the belt of eastward flow is much stronger, 271 ± 49 Sv, than previously estimated because of the presence of eastward barotropic flow. Substantial recirculations exist adjacent to the Antarctic Circumpolar Current: to the north a 38 ± 30 Sv anticyclonic gyre and to the south a 76 ± 26 Sv cyclonic gyre. The net flow between Australia and Antarctica is estimated as 157 ± 58 Sv, which falls within the expected net transport of 145 Sv.The 38 Sv anticyclonic gyre in the South Australian Basin involves the westward Flinders Current along southern Australia and a substantial 33 Sv Subantarctic Zone recirculation to its south. The cyclonic gyre in the Australian–Antarctic Basin has a substantial 76 Sv westward flow over the continental slope of Antarctica, and 48 ± 6 Sv northward-flowing western boundary current along the Kerguelen Plateau near 57°S. The cyclonic gyre only partially closes within the Australian–Antarctic Basin. It is estimated that 45 Sv bridges westward to the Weddell Gyre through the southern Princess Elizabeth Trough and returns through the northern Princess Elizabeth Trough and the Fawn Trough – where a substantial eastward 38 Sv current is hypothesized. There is evidence that the cyclonic gyre also projects eastward past the Balleny Islands to the Ross Gyre in the South Pacific.The western boundary current along Kerguelen Plateau collides with the Antarctic Circumpolar Current that enters the Australian–Antarctic Basin through the Kerguelen–St. Paul Island Passage, forming an energetic Crozet–Kerguelen Confluence. Strongest filaments in the meandering Crozet-Kerguelen Confluence reach 100 Sv. Dense water in the western boundary current intrudes beneath the densest water of the Antarctic Circumpolar Current; they intensely mix diapycnally to produce a high potential vorticity signal that extends eastward along the southern flank of the Southeast Indian Ridge. Dense water penetrates through the Ridge into the South Australian Basin. Two escape pathways are indicated, the Australian–Antarctic Discordance Zone near 125°E and the Geelvinck Fracture Zone near 85°E. Ultimately, the bottom water delivered to the South Australian Basin passes north to the Perth Basin west of Australia and east to the Tasman Basin.     

Temperature fluctuations and current shear in Antarctic Bottom Water at the Vema Sill

The Vema Channel acts as a major conduit for the equatorward spreading of Antarctic Bottom Water between the Argentine and Brazil Basins. For almost two years the thermal stratification above its saddle depth (4660 m) – called Vema Sill – was recorded by moored thermistors and current meters. The lowest 490 m of the water column was instrumented to monitor the well-developed benthic boundary layer of Antarctic Bottom Water. The latter can be subdivided into Weddell Sea Deep Water on the sea bed and lower Circumpolar Deep Water above it. The data show fluctuations on various scales including periods, each about 1–2 weeks long, when the abyssal stratification virtually disappeared. Assuming a stable ratio between density and temperature, time series of bulk Richardson numbers are estimated from temperature and current shear data. The results suggest a potential for intermittent episodes of locally generated vertical mixing.     

Correlation, alteration, and origin of hydrocarbons in the GCA, Bahar, and Gum Adasi fields, western South Caspian Basin: geochemical and multivariate statistical assessments

Geochemical as well as multivariate statistical analyses (PCA) were carried out on 20 crude oil samples from ‘Middle’ Pliocene Production Series (MPPS) of Guneshli-Chirag-Azeri (GCA), Bahar, and Gum Adasi fields in the western South Caspian Basin (SCB). PCA analysis employed to source-specific biomarkers distinguishes the oils into two types one being divided into two sub-types; Type 1 (GCA oils), Type 2A (Bahar field oils) and Type 2B (Gum Adasi field oils). Indirect oil-to-source rock correlations to available source rock data from previous studies suggest that Type 1 oils, located in the Apsheron-Balkhans uplift area, are derived from basinal shales of the Oligocene-Lower Miocene Middle Maikop Formation. Type 2A and 2B oils, located in the Gum-deniz-Bahar-Shakh-deniz trend area, are more likely derived from shelf-edge shales of the Upper Maikop Formation and the Middle-Upper Miocene Diatom Suite, respectively.Biomarker maturity study reveals that Type 1 oils (mean %Rc=0.78) are more mature than Type 2 oils (mean %Rc=0.71). Source rocks, which generated these oils, were at generation depth interval between 5200 m (112 °C) and 7500 m (153 °C) at the time of expulsion. This indicates that the western SCB oils experienced significant long-range vertical migration along the deep-seated faults to accumulate in the MPPS reservoirs. Post-accumulation biodegradation process was only observed in the Guneshli field where bacterial alteration (level 4) began between 4.2 and 2.6 mybp and stopped with the deposition of the overlying impermeable Upper Pliocene Akchagyl Formation. Subsequent light hydrocarbon (C₁–C₁₆) charge into the Guneshli fields caused precipitation of asphaltenes, which is evidenced by high resin to asphaltene ratios for the present-day Guneshli oils. Evaporative-fractionation examined using the scheme of [Thompson, 1987] showed high correlations of the ‘aromaticity’ B parameter (=toluene/n-C₇) and ‘parafinicity’ F parameter (=n-C₇/MCH with the %Rc (maturity) and C₂₇/C₂₉ sterane ratio (organic matter type). This implies that Thompson's approach should be used with caution in the SCB. Among the several mechanisms, rapid and thick deposition of Pliocene sediments and subsequent high heating rate on the Maikop Formation and Diatom Suite is probably the most plausible way of explaining the origin of light hydrocarbons in the Guneshli and Bahar fields.     

Development of the Southern Ocean Continuous Plankton Recorder survey

The Continuous Plankton Recorder (CPR) Type I was first used in Antarctic waters during the 1925–1927 Discovery Expedition, and has been used successfully for 70 years to monitor plankton in the North Sea and North Atlantic Ocean. Sixty-five years later the CPR as a Type II version returned to Antarctic waters when the Australian Antarctic Division initiated a survey of the Southern Ocean on RSV Aurora Australis south of Australia and west to Mawson. The objectives are to study regional, seasonal, interannual and long-term variability in zooplankton abundance, species composition and community patterns, as well as the annual abundance and distribution of krill larvae. The survey covers a large area from 60°E to 160°E, and south from about 48°S to the Antarctic coast—an area of more than 14 million km². Tows are conducted throughout the shipping season, normally September to April, but occasionally as early as July (midwinter). The large areal and temporal scale means that it is difficult to separate temporal and geographical variation in the data. Hence, CPRs are now also towed on the Japanese icebreaker Shirase in collaboration with the Japanese Antarctic programme. Shirase has a fixed route and time schedule, travelling south on 110°E in early December and north on 150°E in mid-March each year, and will serve as an important temporal reference for measuring long-term interannual variability and to help interpret the Australian data. Since 1991, over 90 tows have been made, providing over 36,000 nautical miles of records. The most successful seasons to date have been the 1997/1998, 1999/2000 and 2000/2001 austral summers with 20, 31 and 26 tows, respectively. The 1999/2000 season included a unique, nearly simultaneous three-ship crossing of the Southern Ocean along 25° 30’E, 110°E and 157°E. Typical CPR tows show very high abundance of zooplankton in the uppermost 20 m of the permanently open ocean zone between the sea-ice zone and the Sub-Antarctic Front; this is an area thought to be oligotrophic. Appendicularians and small calanoid and cyclopoid copepods dominate the plankton. By comparison the surface waters of the sea-ice zone have low species diversity and abundances. Zooplankton data, and hence distribution patterns, can be time- and geo-coded to GPS data and environmental data collected by the ships’ underway monitoring system (e.g. fluorescence, water temperature, salinity, and meteorological data).     

Shelf spawning habitat of Emmelichthys nitidus in south-eastern Australia – Implications and suitability for egg-based biomass estimation

The spawning habitat of Emmelichthys nitidus (Emmelichthyidae) in south-eastern Australia is described from vertical ichthyoplankton samples collected along the shelf region off eastern through to south-western Tasmania during peak spawning in October 2005–06. Surveys covered eastern waters in 2005 (38.8–43.5°S), and both eastern and southern waters in 2006 (40.5°S around to 43.5°S off the south-west). Eggs (n = 10,393) and larvae (n = 378) occurred along eastern Tasmania in both years but were rare along southern waters south and westwards of 43.5°S in 2006. Peak egg abundances (1950–2640 per m⁻²) were obtained off north-eastern Tasmania (40.5–41.5°S) between the shelf break and 2.5 nm inshore from the break. Eggs were up to 5-days old, while nearly 95% of larvae were at the early preflexion stage, i.e. close to newly emerged. Average abundances of aged eggs pooled across each survey declined steadily from day-1 to day-5 eggs both in 2005 (97-18) and 2006 (175-34). Moreover, day-1 egg abundances were significantly greater 2.5 nm at either side of the break, including at the break, than in waters ≥5 nm both inshore and offshore from the break. These results, complemented with egg and larval data obtained in shelf waters off New South Wales (NSW; 35.0–37.7°S) in October 2002–03, indicate that the main spawning area of E. nitidus in south-eastern Australia lies between 35.5°S off southern NSW and 43.5°S off south-eastern Tasmania, and that spawning activity declines abruptly south and westwards of 43.5°S around to the south-west coast. In addition, quotient analyses of day-1 egg abundances point to a preferred spawning habitat contained predominantly within a 5 nm corridor along the shelf break, where waters are 125–325 m deep and median temperatures 13.5–14.0 °C. Spawning off eastern Tasmania is timed with the productivity outburst typical of the region during the austral spring, and the temperature increase from the mixing between the southwards advancing, warm East Australian Current and cooler subantarctic water over the shelf. Overall, ichthyoplankton data, coupled with reproductive information from adults trawled off Tasmania, indicate that E. nitidus constitutes a suitable species for the application of the daily egg production method (DEPM) to estimate spawning biomass. This finding, together with evidence in support of a discrete eastern spawning stock extending from southern NSW to southern Tasmania, strengthens the need for DEPM-based biomass estimates of E. nitidus prior to further fishery expansion.     

Estimation of boundary values in a North Atlantic circulation model using an adjoint method

A 1° × 1° resolution version of the MIT-GCM in the North Atlantic is used to test whether open-boundary conditions can be constrained by observations inside the domain using an adjoint method. In this preliminary feasibility study, the model is run during 1993 with a simplified vertical mixing physics. It is constrained by monthly SST fields, monthly climatological θ, S fields and TOPEX/POSEIDON altimetry. The adjoint model is built using automatic differentiation software. The method aims at bringing the model’s trajectory to consistency with data, by adjusting the initial θ, S fields, the time-varying atmospheric forcing fields and the time-varying open-boundary values. An originality of the work is the ‘nested approach’, which uses optimized fields from a global, coarser resolution model for the open-boundary conditions and for the prior estimates of the surface conditions adjustments. A solution is obtained after 75 iterations. This study shows that significant changes can be obtained on the open-boundary values, and that a general improvement in the circulation is achieved in the constrained solution, mainly in the Gulf Stream and equatorial regions. Changes at the open boundaries are characterized by a large temporal variability and small spatial scales. Large local adjustments are found close to the bottom and are likely unrealistic. There, the method tends to compensate for some model’s deficiencies by computing large corrections on the open-boundary values. The analysis of the cost function gradients with respect to the controls allows us to explore the local consistency between the constraints from the different data sets. This study suggests that no fundamental difficulty emerges when constraining open-boundary values. Its extension to a longer run with complete mixing physics can be envisaged.     

Mercury levels in the dissolved and particulate fractions of the Tyrrhenian sea

Determination of the actual mercury concentration in Mediterranean basin seawater was achieved by means of an instrument based on fluorescence spectrometry developed for this purpose, during a field study aboard the oceanographic ship “L.F. Marsili”, between August 1980 and May 1982.Dissolved ·total’ and ·reactive’ mercury and mercury associated with particulate matter were determined on surface and subsurface waters in the Tyrrhenian Sea from La Spezia to Sicily.Concentrations in the range 1.4–19.7 ng l⁻¹ for ·total dissolved mercury’, 0.5–5.9 ng l⁻¹ for ·reactive dissolved mercury’ and 0.3–8.0 ng l⁻¹ for mercury associated with the particulate matter, were measured on surface and subsurface waters in the Tyrrhenian Sea from La Spezia to Sicily.Even if the mean value of the total mercury concentration (dissolved + particulate) was found to be about twice as high as those observed for the oceans, the difference does not seem to be as high as predicted by the model proposed by Buffoni and co-workers to explain the large difference of mercury levels between tunas caught, respectively, in the Mediterranean and in the Oceans.     

Evidence that biological activity affects Ocean Bottom Seismograph recordings

Brief and impulsive signals of uncertain origin appear regularly on records from Ocean Bottom Seismographs (OBS) of several institutions. These signals have been recorded on nearly all deployments of the Texas OBS, including sites at depths greater than 7000 m. At some sites, they account for over 90% of the events recorded. They are of short duration (usually 0.5–4.0 s) and have a characteristic frequency (usually in the range of 4–18 Hz) that differs from site to site. When networks of OBS instruments are deployed, the signals are not recorded simultaneously by different instruments. Neither the frequency content nor the distribution of durations of these signals is similar to what is observed for known earthquake events.We present evidence suggesting that the signals are of biological origin, perhaps caused by animals touching the OBS units. (1) The distribution of these signals on instruments deployed at depths shallower than 1000 m shows a 24 h periodicity, while there is a 24 h periodic pattern on instruments deployed at sites deeper than 1000 m (where there is no visible light). (2) The frequency of occurrence of signals is similar to the vertical distribution of biomass in the oceans, i.e., they appear most frequently on OBS instruments deployed at very shallow depths. (3) Biological material has been found attached to several OBS units upon recovery.University of Texas Institute for Geophysics contribution number 468.     

Winter-to-winter recurrence of sea surface temperature, salinity and mixed layer depth anomalies

The mean seasonal cycle of mixed layer depth (MLD) in the extratropical oceans has the potential to influence temperature, salinity and mixed layer depth anomalies from one winter to the next. Temperature and salinity anomalies that form at the surface and spread throughout the deep winter mixed layer are sequestered beneath the mixed layer when it shoals in spring, and are then re-entrained into the surface layer in the subsequent fall and winter. Here we document this ‘re-emergence mechanism’ in the North Pacific Ocean using observed SSTs, subsurface temperature fields from a data assimilation system, and coupled atmosphere–ocean model simulations. Observations indicate that the dominant large-scale SST anomaly pattern that forms in the North Pacific during winter recurs in the following winter. The model simulation with mixed layer ocean physics reproduced the winter-to-winter recurrence, while model simulations with observed SSTs specified in the tropical Pacific and a 50 m slab in the North Pacific did not. This difference between the model results indicates that the winter-to-winter SST correlations are the result of the re-emergence mechanism, and not of similar atmospheric forcing of the ocean in consecutive winters. The model experiments also indicate that SST anomalies in the tropical Pacific associated with El Niño are not essential for re-emergence to occur.The recurrence of observed SST and simulated SST and SSS anomalies are found in several regions in the central North Pacific, and are quite strong in the northern (>50°N) part of the basin. The winter-to-winter autocorrelation of SSS anomalies exceed those of SST, since only the latter are strongly damped by surface fluxes. The re-emergence mechanism also has a modest influence on MLD through changes in the vertical stratification in the seasonal thermocline.     

Benthic microalgal biomass in sediments of Onslow Bay, North Carolina

Sediment samples were collected at stations along cross-shelf transects in Onslow Bay, North Carolina, during two cruises in 1984 and 1985. Station depths ranged from 11 to 285 m. Sediment chlorophyll a concentrations ranged from 0·06 to 1·87 μg g⁻¹ sediment (mean, 0·55), or 2·6–62·0 mg m². Areal sediment chlorophyll a exceeded water column chlorophyll a a at 16 of 17 stations, especially at inshore and mid-shelf stations. Sediment ATP concentrations ranged from 0 to 0·67 μg g⁻¹ sediment (mean, 0·28). Values for both biomass indicators were lowest in the depth range including the shelf break (50–99 m). Organic carbon contents of the sediments were uniformly low across the shelf, averaging 0·159% by weight. Photography of the sediments revealed extensive patches of microalgae on the sediment surface.Our data suggest that viable benthic microalgae occur across the North Carolina continental shelf. The distribution of benthic macroflora on the North Carolina shelf indicates that sufficient light and nutrients are available to support primary production out to the shelf break. Frequent storm-induced perturbations do not favour settling of phytoplankton, an alternative explanation for the presence of microalgal pigments in the sediments. Therefore, we propose that a distinct, productive benthic microflora exists across the North Carolina continental shelf.