PLS-ANN分析血浆自体荧光光谱的二阶导数光谱识别胃癌

探讨偏最小二乘法结合神经网络法(简称PLS-ANN)分析血浆自体荧光光谱的二阶导数光谱识别胃癌的优势,对20例胃癌病人和23例健康人血浆进行以405nm为激发光的自体荧光光谱检测,采用PLS-ANN法分别对血浆自体荧光光谱和二阶导数光谱进行判别分析。PLS-ANN分析血浆的自体荧光光谱法诊断胃癌的灵敏度为75%,特异度为83%,准确率为79%,PLS-ANN分析血浆的二阶导数光谱法诊断胃癌的灵敏度为90%,特异度为96%,准确率为93%。结果表明PLS-ANN分析血浆的二阶导数光谱法识别胃癌,优于PLS-ANN分析血浆的自体荧光光谱法,有望成为快速识别胃癌的较理想方法。     

荧光技术在溢油鉴别中的应用

荧光光谱具有灵敏度高、选择性好、分析速度快等特点被广泛应用于溢油鉴别。通过结合同步荧光光谱法、导数荧光光谱法和三维荧光光谱法对某码头一次溢油事故的溢油样进行分析鉴别,快速准确地鉴别出溢油源,进一步说明了荧光光谱法是溢油鉴别中一种有效的技术方法。研究结果表明:(1)同步荧光光谱对油源较为相近的油样区分能力较差,但可初步判断其相似性;(2)三维荧光光谱图油样荧光强度会受风化等因素的影响,但谱图的整体轮廓受干扰因素影响较小,芳烃的测定结果能比较准确地反映出溢油源的特征信息;(3)一阶导数荧光光谱中峰的比值能增强光谱特征,提高溢油鉴别的分辨能力。     

海带中昆布素的荧光定量检测及提取工艺优化

针对昆布素检测技术的难点,利用昆布素与苯胺蓝能特异性结合的特点,采用荧光分光光度计建立了昆布素含量的荧光快速检测方法。实验结果表明:NaOH浓度对昆布素立体结构影响较大,在昆布素解旋过程中加入70μL 3 mol/L的NaOH能使昆布素-苯胺蓝荧光复合物具有最大的荧光信号;通过三维荧光扫描,确定昆布素-苯胺蓝荧光复合物的最佳激发和发射波长分别为398 nm和502 nm,在此条件下昆布素-苯胺蓝荧光复合物浓度与其荧光值正相关(R2=0.999 4);方法学分析表明:该测定方法具有较高的精密度(RSD为2.52%)和稳定性(RSD为2.09%),检测范围为20~80 mg/L。基于所建立的昆布素含量快速检测方法,本文设计了有关提取温度、提取时间、pH以及乙醇浓度四个因素三个水平的正交试验对海带中昆布素的提取条件作了初步优化,结果表明:海带中昆布素的最佳提取条件是:置于稀盐酸(pH为1)溶液中于25℃下提取4 h,90%乙醇沉淀。     

黄海典型漂浮大型藻类光谱特征分析

利用实测高光谱和多光谱相机数据对在黄海海域采集的浒苔和马尾藻样本进行光谱特征分析。结果显示:漂浮大型藻类的高光谱反射率均值(Rmean_H)与多光谱反射率均值(Rmean_M)、高光谱藻类指数(VB-FAHH)与多光谱藻类指数(VB-FAHM)之间的相对误差小于15.6%,说明这两种数据具有较好的一致性;基于光谱特征波长的反射率建立比值光谱指数,其中浒苔和马尾藻的差异最为明显的是R640/R554指数;基于多光谱相机计算反射谷深度指数(T-depth),采用阈值法来区分浒苔和马尾藻,T-depth阈值的区分精度分别为69.6%±30.0%和69.6%±24.3%,稍优于虚拟基线漂浮藻类指数(VB-FAH)阈值的区分精度。     

两种新贝尼登虫28S rRNA序列分析及其亲缘关系探讨

采用一对特定引物对形态相近的单殖吸虫纪新贝尼登虫和梅氏新贝尼登虫的基因组DNA进行PCR扩增,获得其28SrRNA的350bp左右的特异片段.测序后经软件分析发现两者同源的337bp序列仅存在一个碱基的差异,遗传相似度达99.70%,甚至高于不同海区不同宿主梅氏新贝尼登虫间99.41%的相似度,与贝尼登虫属3个虫种的同源序列间的遗传差异度为2.08%～11.73%.通过UPGMA和MP聚类分析也可看出,纪新贝尼登虫和梅氏新贝尼登虫的遗传相似性是极为相近的.虽然两种新贝尼登虫的形态特征和遗传多样性极为相似,但它们是否同属于一个种还不能确定,需要经进一步的形态系统比较和更多的基因分析才能得出客观的、公认的结果.     

长江口盐度梯度下有色溶解有机物的分布、来源与季节变化

通过测定有色溶解有机物（CDOM）的吸收光谱和荧光光谱研究了2015年3月和7月长江口盐度梯度下CDOM的分布、组成、来源及河口混合行为等。利用激发发射矩阵荧光光谱（EEMs）并结合平行因子分析（PARAFAC）,研究了CDOM的荧光组分特征,共识别出两类4个荧光组分组成,即类腐殖质荧光组分C1（260,375/490 nm）、C2（365/440 nm）、C3（330/400 nm）及类蛋白质荧光组分C4（295/345 nm）。结果表明,3月和7月,4种荧光组分的分布模式与总荧光强度都基本一致:从口内到口外,先升高后降低,且4种组分都在河口呈现不保守混合行为,在最大浑浊带处存在添加过程,达到峰值,在口外有去除过程。3月腐殖化指数HIX范围在1.12~7.19,而7月HIX的范围在0.87~6.71;生物指数BIX在3月范围在0.76~1.11,7月为0.62~1.15,表明3月CDOM的腐殖化程度较7月高,而自生贡献比例较7月略低。3月吸收系数α（355）的平均值为0.55 m-1 ,7月的略高,为0.61 m-1,表明7月长江口CDOM的含量略高。光谱斜率比值S_R的季节性变化不大,都是近岸低,远岸高,表明CDOM的平均分子质量从口内到口外在逐渐增加。     

海洋浮游植物三维荧光光谱的逐层分类方法研究

提出活体海洋浮游植物三维荧光光谱逐层分类法,将浮游植物区分为不同的"光谱类别"。选取中国近海常见的26种分属于甲藻、硅藻、黄藻、金藻、隐藻、绿藻、蓝藻的浮游植物,在室温20℃和3个光照条件下培养,在第3,6,9,12,15天测其三维荧光光谱。采用主成份分析结合非负最小二乘回归法(NNLSR),以浮游植物叶绿素a的发射峰680nm所对应的激发光谱作为第一特征谱以区分门类,以EX730谱作为硅藻的逐层分类的第二特征谱,SY350谱作为甲藻的第二特征谱,将实验所用9种硅藻和8种甲藻各划分为3个光谱类别;分析405个浮游植物混合物,门类识别正确率大于94%,光谱类别的识别正确率为75%,该方法可用于海洋浮游植物种群结构变化的快速宏观监测。     

Se(IV)对藻蓝蛋白分子的氧化及纳米Se(0)的生成

从钝顶螺旋藻(Spirulina platensis)中提取纯化藻蓝蛋白(Phycocyanin,PC),光吸收值A620/A280为3.1,观察Se(Ⅳ)与PC相互作用的光谱行为及红硒化现象。光谱检测发现,加入SeO32-后,PC在620 nm的特征光吸收减弱,并随Se(Ⅳ)浓度增加和时间延长单调降低,278 nm和347 nm的光吸收增强;PC的荧光发射和荧光激发也均呈现衰减。另外,PC与Na2SeO3相互作用后,观察到红硒化现象,透射电镜(TEM)证明主要存在形态为红色纳米硒。结果提示PC可能是SeO32?作用的敏感靶点,Se(Ⅳ)对PC主要表现为氧化损伤,而Se(Ⅳ)被还原为红色纳米硒。     

基于活体荧光的藻类识别测定技术

以研制使用单色发光二极管为光源的浮游植物荧光自动监测仪为目标,针对12种我国近海常见浮游植物种,选取12个激发波长点(400、430、450、460、470、480、490、510、525、550、570、590nm)的浮游植物活体叶绿素荧光激发光谱作为特征谱,建立多元线性回归模型,采用非负最小二乘法加以解析.实现了各门类浮游植物的识别测定,特别是硅藻和甲藻的识别测定.所测样品中,单门类浮游植物样晶共有79个,识别正确率为96%,回收率≥68%,其中85%的浮游植物样品回收率≥80%;多门类浮游植物的混合样品共有17个,识别正确率为76%,回收率≥74%.     

Taqman-MGB探针荧光定量PCR方法检测对虾传染性皮下及造血组织坏死病毒的研究

本文根据GenBank中对虾传染性皮下及造血组织坏死病毒(IHHNV)基因组上的保守序列,采用Taqman-MGB荧光定量PCR方法,设计了一组特异性引物和探针.利用阳性标准模板进行了定量PCR条件的优化研究.结果显示,在101～108拷贝范围内标准曲线的线性关系为R=0.999 4,检测灵敏度达到10拷贝,重复检测的变异系数均小于2％.利用上述建立的方法和条件,测定39份不同来源的对虾样品中IHHNV,检出率为49％.因此所建立的荧光定量PCR具有较高的灵敏度、特异性和重复性,可作为IHHNV快速的定量检测方法.     

Assessing the Validity of Seismo-Acoustic Predictor Equations for Obtaining Seabed and Sub-Surface Sediment Physical Properties

The interdependence between the seismo-acoustic properties of a marine sediment and its geotechnical/physical parameters has been known for many years, and it has been postulated that this should allow the extraction of geotechnical information from seismic data. Though in the literature many correlations have been published for the surficial layer, there is a lack of information for greater sediment depths. In this article, a desktop study on a synthetic seafloor model illustrates how the application of published near-surface prediction equations to subsurface sediments (up to several tens of meters burial depth) can lead to spurious predictions. To test this further, acoustic and geotechnical properties were measured on a number of sediment core samples, some of which were subjected to loading in acoustically-equipped consolidation cells (oedometers) to simulate greater burial depth conditions. For low effective pressures (representing small burial depths extending to around 10 meters subsurface), the general applicability of established relationships was confirmed: the prediction of porosity, bulk density, and mean grain size from acoustic velocity and impedance appears generally possible for the investigated sedimentary environments. As effective pressure increases through, the observed relationships deviate more and more from the established ones for the near-surface area. For the samples tested in this study, in some instances increasing pressure even resulted in decreasing velocities. There are several possible explanations for this abnormal behavior, including the presence of gas, overconsolidation, or bimodal grain size distribution. The results indicate that an appropriate depth correction must be introduced into the published prediction equations in order to obtain reliable estimates of physical sediment properties for greater subsurface depths.     

海上大直径钢管桩打桩过程中桩周土强度弱化研究

海上大直径钢管桩打桩过程中,桩周土体受到强烈扰动而发生强度弱化,掌握桩周土体强度弱化规律对于准确预测打桩过程、保证工程安全具有重要意义。为研究土体强度弱化规律,开展了环剪试验模拟打桩对桩周土体的扰动,测试土体强度随剪切速率的变化规律,建立了描述土体强度弱化规律的拟合公式,引入到打桩分析软件中。研究结果表明：土体的强度折减程度不仅与土体本身的性质有关还受到土体的埋深和剪切速率的影响,埋深越深土体强度折减程度越低,剪切速率越高土体强度折减越高,在打桩分析中可采用这里推荐的线性折减方法来模拟不同深度处土体强度的折减规律。     

Interannual Sea Level Variations and Annual Tides in the Northwestern Pacific

Specific properties of the interannual sea level variations and annual tides in the Northwestern Pacific were studied. Several tide stations were monitored. The monthly mean sea level for the year of 1995 was analyzed at each tide station. A seismic event in 1995, some tectonic activity around the subject area, and the Kuroshio (the oceanic western boundary current) may possibly contaminate results which would have occurred from the astronomical annual tide alone.     

Phylogenetic diversity and phenotypic characterization of cultivable bacterioplankton isolated from polar oceans

A set of 27 marine planktonic bacteria isolated from the polar regions was characterized by 16S rDNA sequencing and physiological and biochemical testing. More than half of these bacteria were positive for caseinase, gelatinase and 13-glucosidase, and could utilize glucose, maltose or malic acid as carbon source for cell growth. Twelve isolates expressed nitrate reduction activities. Except for one antarctic isolate BSwlO175 belonging to Actinobacteria phylum, these isolates were classified as γ-Proteobacteria, suggesting that γ-Proteobacteria dominated in cultivable marine bacterioplankton at both poles. Genus Pseudoalteromonas was the predominant group in the Chukchi Sea and the Bering Sea, and genus ShewaneUa dominated in cultivable bacterioplankton in the Prydz Bay. With sequence similarities above 97%, genus Psychrobacter was found at both poles. These 27 isolates were psychrotolerant, and significant 16S rDNA sequence similarities were found not only between arctic and antarctic marine bacteria （ 〉 99% ）, but also between polar marine bacteria and bacteria from other aquatic environments （ ≥ 98.8% ）, including temperate ocean, deep sea, pond and lake, suggesting that in the polar oceans less temperature-sensitive bacteria may be cosmopolitan and have a bipolar, even global, distribution at the species level.     

Flow Cytometric Analysis of Coastal Lagoon Bacterioplankton and Picophytoplankton: Fixation and Storage Effects

The effect of different fixation and storage protocols on the flow cytometric (FCM) simultaneous analysis of bacterioplankton and phytoplankton in coastal seawater samples (Mediterranean coastal lagoons) was investigated. FCM measurements (cell number, fluorescence and scatter characteristics) were obtained through DAPI staining. Three fixatives [glutaraldehyde (GA), formaldehyde (FA) and paraformaldehyde (PFA)] and two storage (3 months duration) methods (5 °C and −196 °C) were tested. Two dominant populations were detected in studied samples: bacteria and eukaryotic picophytoplankton. Adding fixatives (2% final concentration) appears necessary to obtain FCM exhaustive counts of all the bacteria and phytoplanktonic cells. This was related to the permeation effect of fixatives which allowed a better DAPI staining of the cells. Maximum fluorescence, i.e. optimal staining of the cells was obtained with FA or PFA, and significant lower fluorescences with GA. Fixed samples stored at 5 °C induced rapid cell loss. Only storage in liquid nitrogen of samples fixed with FA or PFA, allows mid-term (≥4 months) preservation of bacteria or picophytoplankton cell numbers, and limited evolution of DAPI-induced fluorescence and scatter characteristics.     

Estimation of Sediment Properties during Benthic Impact Experiments

Sediment properties, such as water content and density, have been used to estimate the dry and wet weights, as well as the volume of sediment recovered and discharged, during benthic impact experiments conducted in the Pacific and Indian Oceans. The estimates show that the weights of dry (355-1332 t) and wet sediment (1651-4888 t) recovered during the experiments, are not only a function of the total duration and distance covered during the experiment, but also depend on water content and density of the sediment. Estimation of dry sediment and its volumetric ratio in the discharge, are key parameters for calculating the discharged volume. The estimated volume of wet sediment recovered (1427-4049 m 3 ) as well as discharged (2693-6951 m 3 ) during the experiments, provide important inputs to evaluate the sediment resettlement and migration. Using these estimates, the average depth of excavation on the seafloor, can also been calculated. However, the stages of sediment recovery and discharge are expressed differently in some of the experiments. In order to standardize these, different stages have been identified, and definitions of certain terms have been suggested, for use in the future. The methods of calculating different properties, as well as weight and volume of discharged sediment are described in the paper for use in other applications concerning deep-sea discharges.     

A Tidal Flow Model for the Gulf of Kachchh, India

A vertically integrated model has been used to study the tidal circulation and currents in the Gulf of Kachchh along the west coast of India. The model is fully nonlinear and uses a semiexplicit finite difference scheme to solve the basic hydrodynamic equations on a staggered grid. The model is forced by prescribing the tides along the open boundary of the model domain. The flow is simulated both with and without the presence of the proposed tidal barrage across the Hansthal Creek in the Gulf of Kachchh. The results show a considerable change in the behavior of the tidal flow in the presence of the barrage.