深海热液喷口生物群落的研究进展

深海热液喷口生物群落并不依赖光合作用获取能量,它们是一类独特的生物类型,其食物链的基础是化学合成细菌,这些细菌依靠喷口热液中的还原无机物氧化．利用CO。合成有机碳,它们共生于大个体动物的软组织或绍中,向寄主提供生存必需的有机碳。地质时期古热液喷口生物群落的研究还表明,该类生物群落在古生代（可能更早）即已出现。此外,现代热液喷口与古热液喷口生物群落的比较研究,在探索该生物群落乃至早期生命的起源、演化方面也取得了可喜进展。     

High-resolution dynamics of a deep-sea hydrothermal mussel assemblage monitored by the EMSO-Açores MoMAR observatory

Although the spatial distribution of hydrothermal vent assemblages in relation to environmental conditions has been assessed in several studies, there is little documented data on the temporal variation of the fauna and corresponding abiotic factors in a vent community. Here, we present one of the longest integrated (faunal and environmental data) time series ever obtained in a hydrothermal ecosystem. The data were acquired using the TEMPO ecological module that was deployed between 2006 and 2008 on the Mid-Atlantic Ridge, providing the first insights into the day-to-day variations in a Bathymodiolus azoricus mussel assemblage from the Lucky Strike vent field for the 48 days during which the video camera operated. The time-series yielded additional valuable information on longer-term variation in faunal distribution (comparing ~2 years), temperature (11.7 months) and iron concentrations (3.8 months).Results from daily observations showed that the vent mussel assemblage was quite stable over the 48 days of the study, reflecting the relative stability of environmental conditions during this period. B. azoricus mussels appeared to thrive in areas of very limited hydrothermal fluid input in habitats that are, as in other deep-sea ecosystems, significantly influenced by ocean tidal signals. Variation in species abundance was observed but, with the exception of Mirocaris fortunata shrimp, no links could be established with measured environmental variables. Although we did not observe any clear tidal influence on vent fauna, it is likely that physiological processes and species’ activities are influenced by these periodic variations. Longer time series are currently being acquired by different experiments deployed on the EMSO-Açores MoMAR observatory (2010–2013 and still recording). They should further improve our knowledge of the dynamics of hydrothermal systems and their associated faunal communities.     

Modeled interactions of mesoscale eddies with the East Pacific Rise: Implications for larval dispersal

Larval transport from distant populations is essential for maintenance and renewal of populations in patchy and disturbed ecosystems such as deep-sea hydrothermal vents. We use quasi-geostrophic modeling to consider the potential for long-distance dispersal of hydrothermal vent larvae in mesoscale eddies interacting with the northern East Pacific Rise. Modeled eddy dynamics were similar to the observed propagation dynamics of Tehuantepec eddies, including their ability to cross the ridge. Simulated surface anticyclones were associated with coherent cyclones in the deep layer with relatively strong current velocities that could significantly increase the dispersal potential of passive particles. Eddy interactions with ridge topography further enhanced tracer dispersal along the ridge axis through shearing and elongation of the eddy core. Simulations suggest that the passage of an eddy would result in local loss from the vent field and aggregate transport with potential enhancement of dispersal between vent fields separated by up to 270 km. Based on the latitude at which most Tehuantepec eddies cross the ridge, eddy-induced flows would enhance connectivity between the 13°N, 11°N, and 9°N vent fields along the East Pacific Rise asymmetrically with higher transport from northern vent fields to southern vent fields.     

Spatial distribution, diversity and composition of bacterial communities in sub-seafloor fluids at a deep-sea hydrothermal field of the Suiyo Seamount

Spatial distribution, diversity, and composition of bacterial communities within the shallow sub-seafloor at the deep-sea hydrothermal field of the Suiyo Seamount, Izu-Bonin Arc, Western Pacific Ocean, were investigated. Fluids were sampled from four boreholes in this area. Each borehole was located near or away from active vents, the distance ranging 2–40 m from active vents. In addition, fluids discharging from a natural vent and ambient seawater were sampled in this area. We extracted DNA from each sample, amplified bacterial 16S rRNA genes by PCR, cloned the PCR products and sequenced. The total number of clones analyzed was 348. Most of the detected phylotypes were affiliated with the phylum Proteobacteria, of which the detection frequency in each clone library ranged from 84.6% to 100%. The bacterial community diversity and composition were different between hydrothermal fluids and seawater, between fluids from the boreholes and the vent, and even among fluids from each borehole. The relative abundances of the phylotypes related to Thiomicrospira, Methylobacterium and Sphingomonas were significantly different among fluids from each borehole. The phylotypes related to Thiomicrospira and Alcanivorax were detected in all of the boreholes and vent samples. Our findings provide insights into bacterial communities in the shallow sub-seafloor environments at active deep-sea hydrothermal vent fields.     

Detoxification mechanisms in shrimp: comparative approach between hydrothermal vent fields and estuarine environments

Hydrothermal vents are extreme deep-sea habitats that, due to their singular features, still intrigue scientific communities. Swift growth rates and profuse biomass of biological communities can be observed, despite of their inherently unstable physical-chemical and toxic conditions, indicating that organisms inhabiting this environment must be well adapted to these inhospitable conditions. The caridean shrimp, Chorocaris chacei, Mirocaris fortunata and Rimicaris exoculata, together with bathymodiolid mussels, dominate the vent fauna along the Mid-Atlantic Ridge (MAR). Crustacean species are widely used as biological indicators of environmental alterations, since they play a key ecological role as planktivorous grazers, epibenthic scavengers or as prey species. The biological consequences of the hydrothermal metal-rich environment in shrimp species are still largely unknown. Therefore, the aim of this study was the determination of the metal levels (Ag, Cd, Cu, Fe, Mn and Zn), metallothioneins (MT) and lipid peroxidation (LPO) in shrimp species collected in Rainbow, Lucky Strike and Menez-Gwen vent sites, in order to evaluate their different adaptation strategies toward metals when compared with two common coastal shrimp species (Palaemon elegans and Palaemonetes varians) from a fairly unpolluted estuarine system in south Portugal (Ria Formosa). Results show significant differences in metal concentrations, MT levels and lipid peroxidation between vent and coastal shrimp and also between shrimp species from the same site. This indicates that biochemical responses in both vent and coastal shrimp are affected not only by the environmental characteristics but also by inter-specific differences. Nevertheless, these responses apparently grant a successful adaptation for the survival in a metal-extreme environment.     

Microbial Diversity of Deep-sea Sediments from Three Newly Discovered Hydrothermal Vent Fields in the Central Indian Ridge

Since the discovery of hydrothermal vents in the late 1970s, deep-sea hydrothermal vent fields have attracted great attention as biological hotspots. However, compared with other ocean ridges, the structure and function of microbial communities inhabiting vent fields in the Central Indian ridge (CIR) remain understudied. Here, we provide for the first time 16S rRNA gene-based comparative metagenomic analysis of the sediment-associated microbial communities from three newly discovered vent fields in the CIR. Sediment samples collected in the Invent B, Invent E and Onnuri vent fields varied in geochemical properties, elemental concentrations and associated microbial communities. Proteobacteria (Gammaproteobacteria) was the dominant phylum in Invent B and Onnuri vent fields. In contrast, Invent E mainly consisted of Chloroflexi and Euryarchaeota. Predicted functional profiling revealed that the microbial communities in the three vents are dominated by chemoheterotrophic functions. In addition, microbial communities capable of respiration of sulfur compounds, nitrification, nitrite oxidation, methylotrophy, and methanotropy were found to be the main chemolithoautotrophs. Compared to other vent fields, Invent E showed a predominance of archaeal methanogens suggesting it exhibits slightly different geochemistry. Multivariate analysis indicated that the biogeochemical and trace metal differences are reflected in the sediment microbial compositions of the three vent fields. This study expands our current understanding of the microbial community structure and potential ecological functions of the newly discovered hydrothermal vent fields in the CIR.

     

Extensive deep-sea dispersal of postlarval shrimp from a hydrothermal vent

Hydrothermal vent fields on the Mid-Atlantic Ridge (MAR) are small (no more than 0.1-1.0 km²) and widely spaced (a reported average of one field per 175 km between 11°N and 40°N). Their faunas are similar and usually dominated by shrimp of the family Bresiliidae. Little is known about the way these animals (and other members of the vent fauna) disperse and colonize new vents. Vent shrimp juveniles have been taken close to certain vent sites, and in midwater, but their larvae and postlarvae have not been captured. We report here that bresiliid shrimp postlarvae are very widely dispersed around the Broken Spur vent field and extend into the next MAR segment and the Atlantis Fracture Zone beyond. The populations show density gradients declining both vertically and horizontally from the vent site, in contrast to the overall pelagic biomass. This is the furthest recorded dispersal (> 100 km) of identified larvae from a hydrothermal vent and is sufficient to give them access to adjacent vent fields and thus the scope for colonising new sites.     

Epsilon-变形菌趋化信号通路中偶联蛋白CheV与趋化受体蛋白的CZB结构域的功能研究

细菌通过趋化系统感知和响应外界环境变化并进行趋利避害, 因此很多细菌进化出了非常复杂多样的趋化系统以适应不同的生态位。Epsilon-变形菌广泛存在于自然界中, 能适应不同的生态环境, 特别是深海Epsilon-变形菌能适应深海热液口和冷泉等极端环境, 其趋化系统可能有其独特之处。通过BlastP和MIST数据库分析, 我们发现大部分深海Epsilon-变形菌拥有F3类型趋化系统且具有单拷贝的双功能域融合蛋白CheV。此外, 一种特殊结构域CZB (C-terminal Zinc-Binding) 存在于深海Epsilon-变形菌的趋化受体蛋白中, 而且在部分深海Epsilon-变形菌的趋化受体中还发现并鉴定了一种新的结构域CZB-like结构域。文章以Epsilon-变形菌的模式菌株空肠弯曲杆菌(Campylobacter jejuni 81-176)为研究对象, 用细菌双杂交试验证实了CheV能与所有含MA结构域的趋化受体相互作用。用电感耦合等离子体质谱(ICP-Mass)技术证实了CZB-like结构域不能结合Zn离子, 但细菌双杂交试验证实它能介导趋化受体Tlp9与CheV的互作。     

Consideration of the oasis analogy for chemosynthetic communities at Gulf of Mexico hydrocarbon vents

The analogy between desert oasis and deep-sea chemosynthetic community arose from the biomass contrast between vents and the relatively depauperate background benthic fauna. Fully developed, the analogy helps pose questions about interactions with the background fauna with respect to resources, colonization, and persistence. The chemosynthetic sites of the Gulf of Mexico provide an opportunity to consider possible interactions between vent and nonvent fauna over a 3000-m depth range. It is postulated that deep chemosynthetic communities require the operation of geochemical transporting and concentrating processes to overcome low levels of in situ methane and sulfide production. Clathrate reservoirs may serve these functions. A few chemosynthetic species at the Gulf of Mexico upper slope sites are related to shallow-water sulfide species, but it can be speculated that the dominant chemosynthetic fauna may have originated in a wide spread deep sulfide biome of the Cretaceous. Generic endemism of consumers is low in Gulf of Mexico sites, suggesting a high level of colonization from the surrounding benthos. Chemosynthetic communities may avoid excessive colonization by predators in spite of the apparent food limitation of the surrounding benthos due to toxicity or an evolutionary mechanism selecting against specialized predators. The abundance of large predators is related to the composition of the surrounding benthos and is high at the Gulf of Mexico upper slope sites. Exclusion of chemosyntheic communities from shallower depths may be due to excessive predation by generalists.     

A new deep-sea probe for in situ pH measurement in the environment of hydrothermal vent biological communities

In situ measurements have been shown to be the most relevant means to characterise the chemical properties of the highly dynamic medium surrounding hydrothermal vent organisms. However, few instrumental devices can perform such measurements at great depth, and there is great need to extend the range of chemical parameters that can be determined in situ. To investigate the spatial and temporal variations of pH within the habitats of vent organisms, a deep-sea probe was developed and successfully tested during the HOPE’99 diving cruise (13°N, East Pacific Rise). In situ measurements allowed us to quantify the pH range over different biological communities, highlighting differences between the habitats, as well as micro-scale variations. As pH is expected to play a significant role in major biogeochemical processes occurring in the seawater/fluid-mixing zone, this probe should be of great utility for the study of interactions between vent communities and their environment.     

Variations in deep-sea hydrothermal vent communities on the Mid-Atlantic Ridge near the Azores plateau

Near the Azores Triple Junction as the Azores Plateau is approached, the ridge axis becomes shallower; its depth decreases from ca. 2400 m in the Rainbow vent field (36°13′N) to ca. 850 m in the Menez Gwen vent field (37°35′N). In this area, extensive mussel beds of the mytilid Bathymodiolus azoricus dominate the hydrothermal vent fauna, along with populations of three shrimps (Rimicaris exoculata, Mirocaris fortunata and Chorocaris chacei). The main physical and chemical characteristics of the vent habitat were studied by discrete sampling, in situ analysis and sediment trap moorings. The vent fauna is distributed along a variable band where the vent fluids and seawater mix, with R. exoculata living in the most concentrated areas and Bathymodiolus azoricus in the most diluted zones. Various non-endemic species live at the border of the vent field. The variations observed in structure and composition of the communities along the depth gradient are most likely due to changes in vent fluid toxicity (metallic and sulphide content) and suspended mineral particles, which render the fluids harsher for species living there. The main faunal differences observed between Lucky Strike and Menez Gwen hydrothermal fields are due to an impoverishment in the hydrothermal endemic species and to the penetration of bathyal species. The comparison of the three studied vent fields suggests the existence of a succession of several biogeographic islands rather than a single province.     

深海热液口大型底栖生物遗传多样性的研究进展

深海热液口及其生物群落自1977年发现以来,受到海洋生物学界的广泛关注。近年来伴随深海调查技术的进步,大量热液生物群落相继被发现,并在生物地理学、生态学和生物多样性方面取得了显著的进展。目前,受采样不足及分类学研究的限制,针对深海热液口的遗传多样性研究多集中于大型底栖生物。本文拟对该领域的研究成果进行简要综述,以期加深对深海热液口大型底栖生物的物种分布模式、扩散途径及群体连通性的认识,为深海热液口生物多样性的研究提供新视角。     

我国海底热液活动研究的阶段性进展与展望

海底热液活动调查研究是深海进入、深海探测和深海开发的切入点之一。近十年来,中国在西太平洋弧后盆地、东太平洋海隆、大西洋洋中脊和印度洋脊,发现了一批新的海底热液活动区,围绕着热液活动区的硫化物、流体、热液柱、生物等热液产物开展了调查研究,构建了海底热液地质学,提出了热液活动、冷泉及天然气水合物的同源异汇假说,出版了《海底热液地质学》、《现代海底热液硫化物成矿地质学》、《现代海底热液活动》、《东太平洋海隆热液地质》专著,获得了一批调查研究成果。未来,聚焦海底热液活动的深部过程及其资源环境效应关键问题,发展海底热液活动探测技术,拓展极地海底热液活动调查研究新领域,围绕烟囱体、热液柱、含金属沉积物、流体以及热液区生物等热液产物,开展深入、系统的调查研究工作,无疑将推动海底热液地质学取得新的进展。     

Metal concentrations and metallothionein-like protein levels in deep-sea fishes captured near hydrothermal vents in the Mid-Atlantic Ridge off Azores

The knowledge of metal contamination in deep-sea fishes living in the surroundings of hydrothermal vents is very scarce, along with the detoxification mechanisms that allow them to live near one of the most metal contaminated marine environments. Six deep-sea fish species, although not vent endemic were collected near three Mid-Atlantic Ridge (MAR) hydrothermal vents (Menez Gwen, Lucky Strike and Rainbow) and the gills, muscle and liver were selected for this study due to their importance in metal metabolism and storage. The concentrations of seven metals (Ag, Cd, Cr, Cu, Fe, Mn, and Ni) and a metal-related biomarker (metallothionein-like proteins–MTL) were assessed. Major differences in metal accumulation among fish species are related to their feeding habits and vent site of their capture. The liver and gills are in general the most important tissues for metal accumulation compared to the muscle, but tissue partitioning is very dependent on the fish species considered. Compared to other deep-sea fishes, fish capture in the vicinity of hydrothermal vents accumulates higher amounts of metals in general. However, MTL levels are not considerably different from what is found in commercial coastal fishes, and is poorly correlated with metal concentrations in the tissues. Therefore, MTL may not constitute one major detoxification system for deep-sea species living in the vicinity of three important MAR vent sites.     

Patterns of Gene Expression Variation across Body Parts of the Hydrothermal Vent Shrimp Nautilocaris saintlaurentae

Ocean Science Journal - Since deep-sea hydrothermal vents have been targeted for mining mineral resources, concerns about the potential impacts of mining on vent ecosystems have gradually...     

Sulfur bacteria originating from the water and organisms in a hydrothermally active area of the mid-okinawa trough

Hydrothermal venting and associated fauna were observed in the mid-Okinawa Trough during deep-sea diving byShinkai 2000. Water and organisms were collected there for on-board cultivation of sulfur bacteria. Sulfur bacteria capable of growing on an inorganic medium containing thiosulfate were subcultured and isolated. The isolated chemoautotrophic sulfur bacteria were all rod- to beanshaped, nonsporing, and gram-negative. They could also grow on an organic medium and thus were shown to be facultative chemoautotrophs. Their facultative chemoautotrophy would result in synergetic metabolism of both inorganic and organic substrates; thus the sulfur bacteria could be highly adaptive to nutritional diversity of hydrothermal vent areas.     

Distribution of mega fauna on sulfide edifices on the Eastern Lau Spreading Center and Valu Fa Ridge

Hydrothermal vent sulfide edifices contain some of the most extreme thermal and chemical conditions in which animals are able to live. As a result, sulfide edifices in the East Pacific Rise, Juan de Fuca Ridge, and Mid Atlantic Ridge vent systems often contain distinct faunal assemblages. In this study, we used high-resolution imagery and in-situ physico-chemical measurements within the context of a Geographic Information System (GIS) to examine community structure and niche differentiation of dominant fauna on sulfide edifices in the Eastern Lau Spreading Center (ELSC) and Valu Fa Ridge (VFR) in the Western Pacific Ocean. Our results show that ELSC and VFR sulfide edifices host two distinct types of communities. One type, that covers the majority of sulfide edifice faces, is overall very similar to nearby lava communities and biomass is dominated by the same chemoautotrophic symbiont-containing molluscs that dominate lava communities, namely the provannid gastropods Alviniconcha spp. and Ifremeria nautilei and the mytilid bivalve Bathymodiolus brevior. The spatial distribution of the dominant molluscs is often a variation of the pattern of concentric rings observed on lavas, with Alviniconcha spp. at the tops of edifices where exposure to vent flow is the highest, and I. nautilei and B. brevior below. Our physico-chemical measurements indicate that because of rapid dispersion of vent fluid, habitable area for symbiont-containing fauna is quite limited on sulfide edifices, and the realized niches of the mollusc groups are narrower on sulfide edifices than on lavas. We suggest that competition plays an important role in determining the realized distributions of the mollusc groups on edifices. The other habitat, present in small patches of presumably hot, new anhydrite, is avoided by the dominant symbiont-containing molluscs and inhabited by crabs, shrimp and polynoids that are likely more heat tolerant. The ratio of sulfide concentration to temperature anomaly of vent fluids was significantly different between sulfide edifice sites and lava sites in the southern vent fields but not in the northern vent fields. We suggest that this is due to increased sulfide consumption by a large microbial consortium associated with the more friable andesitic lava substrates in the south.     

东太平洋海隆深海热液区沉积物古菌多样性分析

采用PCR-RFLP方法对东太平洋海隆深海热液区3个站位沉积物中的古菌多样性进行了初步研究.结果显示,从古菌16S rRNA基因文库中随机挑取的296个阳性克隆分属奇古菌门（Thaumarchaeota,47.64%）、广古菌门（Euryarchaeota,44.93%）、泉古菌门（Crenarchaeota,6.77%）和未分类古菌（0.68%）,其中优势菌群为奇古菌门的亚硝化侏儒菌属（Nitrosopumilus,35.47%）和广古菌门的热原体纲（Thermoplasmata,27.03%）,DHVE3、DHVE5、DHVE6、MBGB和MBGE类群在沉积物样品中也均有发现.另外,3个站位沉积物中古菌类群组成存在差异,S5-TVG1站位样品文库的97个古菌克隆分属奇古菌门（49.48%）、广古菌门（49.48%）和泉古菌门（1.03%）,S14-TVG10站位样品文库的103个古菌克隆由奇古菌门（84.47%）和广古菌门（15.53%）组成,S16-TVG12站位样品文库的96个古菌克隆包括广古菌门（71.88%）、泉古菌门（19.79%）、奇古菌门（6.25%）和未分类古菌（2.08%）.研究结果表明,东太平洋海隆深海热液区沉积物中古菌多样性丰富,存在着许多新的古菌菌群;不同站位古菌菌群结构以及多样性存在差异,这与其所处环境的热液活动密切相关.     

Tubeworm-associated communities at hydrothermal vents on the Juan de Fuca Ridge,northeast Pacific

Hydrothermal vent communities on a mid-ocean ridge crest can be separated by large distances on separate segments. Heat sources, vent character, fluid chemistry and current patterns may differ markedly. This study examines whether vent community characteristics on three of the four southern segments of the Juan de Fuca Ridge are significantly different. Taxonomic composition and relative abundance of the fauna over 1 mm in size associated with vestimentiferan tubeworm bushes are examined from fifty-one collections. Among nearly 350,000 specimens, 37 taxa are recognized, most to species level. Another 14 taxa are meiofaunal in size classification. Species richness and selected diversity indicators are highest on Axial Volcano while animal density within the bushes does not differ significantly. Cluster analysis does not group collections by location, year of collection or vent temperature; collection substratum—basalt or sulphide—may influence clustering. The architecture of the tubes of tubeworm bushes appears to affect the numbers of species present and the resultant clusters. The tightly interwoven, knotted Ridgeia piscesae tubes found on Axial host twice as many species as tubeworm bushes with a less complex structure. Four species dominate most of the collections: two gastropods (Lepetodrilus fucensis and Depressigyra globulus) and two polychaetes (Paralvinella pandorae and Amphisamytha galapagensis). Other vent species are low in abundance (<1% relative abundance) and patchy in distribution. Four collections with no visible flow had markedly different assemblages representing a transition state from vent assemblages to normal deep-sea fauna. There are differences in community structure among the segments, but the causes for these differences are unclear. Higher diversity on Axial Volcano may be supported by a greater time of sustained venting, a larger venting area, water circulation contained within the caldera, or flow conditions that sponsor growth of more complex habitat.