Genetic differentiation of three key anadromous fish populations of the Hudson River

Large, recreationally or commercially important populations of Atlantic sturgeon (Acipenser oxyrinchus), American shad (Alosa sapidissima), and striped bass (Morone saxatilis) occur in the Hudson River. Members of the Hudson River populations of these fishes also occur over a broad range along the Atlantic coast where they mix with conspecifics from other anadromous populations. For management purposes, it is imperative to be able to discriminate among individual stocks so that weak stocks may be protected and harvest may be allocated equitably. Because of their sensitivity and resistance to environmentally-induced temporal variation, molecular approaches have been increasingly employed in stock identification studies. However, post-Pleistocene recolonization of the Hudson River must have occurred less than 10,000 years ago—a relatively brief period for genetic divergence among populations. We tested whether various measures of DNA variation between Hudson River populations and adjacent populations of Atlantic sturgeon, American shad, and striped bass were sufficient to discriminate among their conspecific populations. American shad populations surveyed for mtDNA variation were highly diverse genotypically, but genotypic frequencies among the populations of the Connecticut, Hudson, and Delaware rivers were statistically homogenous (p>0.05). In contrast, Atlantic sturgeon (surveyed for mtDNA variation) and striped bass (surveyed for mtDNA and nuclear DNA variation) populations of the Hudson River were not genotypically diverse, but they were differentiated from northern and southern populations. Our results suggest higher gene flow (and lesser homing fidelity) among American shad populations in comparison with the two other species.     

Effects of a Persistent Red Tide (<Emphasis Type="Italic">Karenia brevis</Emphasis>) Bloom on Community Structure and Species-Specific Relative Abundance of Nekton in a Gulf of Mexico Estuary

An unusually persistent red tide event caused by the ichthyotoxic dinoflagellate Karenia brevis occurred along the southwest Florida coast in 2005. Extensive fish kills led to concerns regarding the effect of red tide on fish populations and their subsequent recruitment. Community structure differences were analyzed for all small- and large-bodied nekton species collected by fisheries-independent monitoring from 1996 through 2006. Indices of abundance of five economically important fish species were also calculated from this time period. A significant change in small- and large-bodied nekton community structure was apparent from summer 2005 through spring 2006. Declines in the annual recruitment of juvenile spotted seatrout (Cynoscion nebulosus), sand seatrout (Cynoscion arenarius), and red drum (Sciaenops ocellatus) were evident in 2005 and 2006. Species-specific subadult and adult abundances, however, were consistent with those of previous years. These community shifts and species-specific declines appear to be associated with the red tide event.     

Interactions among some dominant estuarine nekton species

Interactions between pairs of numerically dominant species collected at inlet and creek shorezone and channel habitats within a high salinity estuary in northeastern South Carolina were examined using two-way contingency tables and binomial tests. Of the significant species interactions, over 71% were positive and these primarily occurred within shorezone habitats. The strongest positive interactions were between young-of-the-year spot (Leiostomus xanthurus) and blue crab (Callinectes sapidus) juveniles in both shorezone habitats, and between striped killifish (Fundulus majalis), white mullet (Mugil curema), and striped anchovies (Anchoa hepsetus) in the inlet shorezone habitat. One of the most positive species associations in channel habitats was between the bay anchovy (Anchoa mitchilli) and the Atlantic brief squid (Lolliguncula brevis). These positive relationships between species may be explained by one species enhancing the habitat for another, both species responding to similar environmental conditions, cooperative social interactions such as mixed schooling, or the attraction of predators to prey. Negative interactions were found between schools of Atlantic silversides (Menidia menidia) and striped killifish in the inlet shorezone and between schools of Atlantic silversides and bay anchovies in the creek shorezone. Schools of Atlantic silversides may either displace or compete with other common shorezone species. Positive and negative interactions suggest that relationships between some species pairs did not occur randomly within certain habitats and may have contributed to the organization of the estuarine nekton community. Differences in the strengths and direction of interactions of certain species pairs among habitats and seasons were probably related to the differences in the physical characteristics of those habitats and/or changes in the relative abundance of dominant species and life stages over time.     

The Role of Submerged Aquatic Vegetation in Structuring the Nearshore Fish Community Within an Estuary of the Southern Gulf of St. Lawrence

Artificial fertilizers are contributing to the replacement of eelgrass (Zostera marina) by sea lettuce (Ulva lactuca) in estuaries of Prince Edward Island (PEI), Canada. In this study, we found that the nearshore fish community differed between areas dominated by these two vegetations within an estuary in every month sampled (April–August). Adult northern pipefish (Syngnathus fuscus), threespine stickleback (Gasterosteus aculeatus), blackspotted stickleback (Gasterosteus wheatlandi), and Atlantic silverside (Menidia menidia) were most strongly associated with eelgrass, while mummichog (Fundulus heteroclitus), ninespine stickleback (Pungitius pungitius), and American eel (Anguilla rostrata) were often more numerous in sea lettuce. Sea lettuce stations tended to have more young-of-the-year mummichog, fourspine stickleback (Apeltes quadracus), and Gasterosteus sp. than eelgrass stations but fewer young-of-the-year northern pipefish and Atlantic silverside. Fish richness and abundance were significantly lower in the sea lettuce than eelgrass habitat during August when benthic hypoxia occurred. We conclude that the loss of eelgrass from PEI estuaries will result in significant declines in fish biodiversity.     

Response of juvenile fish assemblages in tidal salt marsh creeks treated forPhragmites removal

We examined fish assemblages in tidal salt marsh creeks in Delaware Bay in order to evaluate their response to treatment forPhragmites removal following initial treatment in 1996. In Alloway Crrek, a tributary to Delaware Bay, reference creeks draining marsh of untreatedPhragmites or naturally occurringSpartina were compared with creeks in marshes treated forPhragmites removal. These reference and treated creeks occur in close proximity and share many characteristics including salinity, temperature, dissolved oxygen, and turbidity, although creeks inPhragmites sites differed slightly in bathymetry. We analyzed a time series of otter trawl collections (22 monthly sample periods from 1999 to 2001) for differences in juvenile fish assemblage among creeks with different vegetation history. Periodically, young-of-the-year (YOY) and age 1+ white perch (Morone americana), YOY spot (Leiostomus xanthurus), YOY Atlantic menhaden (Brevoortia tyrannus), and other species were relatively more abundant atPhragmites sites, but other dominant species were preiodically abundant at all sites. Among-treatment differences based on principal response curves analysis accounted for about 19% of the total species variation, but differences varied widely among sample periods and there is little or no indication of a trend over the 3-yr period. Larger collections were often associated with subtidal structure, which was more common atPhragmites sites and potentially represents a sampling artifact. Assemblages of creeks with differing vegetation history differ weakly but recognizably, suggesting slow or little response to treatment, at least based on otter trawl collections in subtidal marsh creeks.

     

Habitat associations of estuarine species: Comparisons of intertidal mudflat, seagrass (Zostera marina), and oyster (Crassostrea gigas) habitats

The complexity of habitat structure created by aquatic vegetation is an important factor determining the diversity and composition of soft-sediment coastal communities. The introduction of estuarine organisms, such as oysters or other forms of aquaculture, that compete with existing forms of habitat structure, such as seagrass, may affect the availability of important habitat refugia and foraging resources for mobile estuarine fish and decapods. Fish and invertebrate communities were compared between adjacent patches of native seagrass (Zostera marina), nonnative cultured oyster (Crassostrea gigas), and unvegetated mudflat within a northeastern Pacific estuary. The composition of epibenthic meiofauna and small macrofaunal organisms, including known prey of fish and decapods, was significantly related to habitat type. Densities of these epifauna were significantly higher in structured habitat compared to unstructured mudflat. Benthic invertebrate densities were highest in seagrass. Since oyster aquaculture may provide a structural substitute for seagrass being associated with increased density and altered composition of fish and decapod prey resources relative to mudflat, it was hypothesized that this habitat might also alter habitat preferences of foraging fish and decapods. The species composition of fish and decapods was more strongly related to location within the estuary than to habitat, and fish and decapod species composition responded on a larger landscape scale than invertebrate assemblages. Fish and decapod species richness and the size of ecologically and commercially important species, such as Dungeness crab (Cancer magister), English sole (Parophrys vetulus), or lingcod (Ophiodon elongatus), were not significantly related to habitat type.     

Partial Migration Across Populations of White Perch (<Emphasis Type="Italic">Morone americana</Emphasis>): A Flexible Life History Strategy in a Variable Estuarine Environment

We evaluated the prevalence of partial migration, coexisting resident and migratory life history types, within six white perch (Morone americana) populations in sub-estuaries (Upper Bay, and Potomac, Choptank, Nanticoke, James, and York Rivers) of the Chesapeake Bay. Otolith stable isotope (δ¹⁸O) values were used to resolve fish habitat use along an estuarine salinity gradient and define resident or migratory behavior. The majority of adults within Upper Bay and Potomac River populations were resident, whereas individuals from the Choptank, Nanticoke, James, and York Rivers were predominantly migratory. Beyond population differences, large interannual variability in life history types was observed, likely due to differences in estuarine conditions that influence growth rate of individuals (e.g., temperature, zooplankton density). Because we observed partial migration in all study populations, we suggest that this trait is characteristic of this species, permitting plastic responses to variation in the estuarine environment.     

Spatial variation in delaware bay (U.S.A.) marsh creek fish assemblages

Delaware Bay is one of the largest estuaries on the U.S. eastern seaboard and is flanked by some of the most extensive salt marshes found in the northeastern U.S. While physicochemical and biotic gradients are known to occur along the long axis of the bay, no studies to date have investigated how the fish assemblage found in salt marsh creeks vary along this axis. The marshes of the lower portion of the bay, with higher salinity, are dominated bySpartina spp., while the marshes of the upper portion, with lower salinity, are currently composed primarily of common reed,Phragmites australis, S. alterniflora, or combinations of both. Extensive daytime sampling (n=815 tows) during May–November 1996 was conducted with otter trawls (4.9 m, 6 mm mesh) in six intertidal and subtidal marsh creek systems (upper and lower portions of each creek) where creek channel depths ranged from 1.4–2.8 m at high tide. The fish taxa of the marsh creeks was composed of 40 species that were dominated by demersal and pelagic forms including sciaenids (5 species), percichthyids (2), and clupeids (7), many of which are transients that spawn outside the bay but the early life history stages are abundant within the bay. The most abundant species wereMorone americana (24.3% of the total catch),Cynoscion regalis (15.4%),Micropogonias undulatus (15.3%),Anchoa mitchilli (12.0%), andTrinectes maculatus (10.8%). Non-metric Multi-Dimensional Scaling ordination of catch per unit effort (CPUE) data indicated two fish assemblages that were largely independent of the two major vegetation types, but generally corresponded with spatial variation in salinity. This relationship was more complex because some of the species for which we could discriminate different age classes by size had different patterns of distribution along the salinity gradient.     

Contamination by heavy metals (Cd, Zn, Cu, and Hg) of eight fish species in the Gironde estuary (France)

The Gironde estuary, one of the largest in Europe, is considerated as a reference ecological system, with all the western European diadromous fish species present. The national biomonitoring program on the coastal marine environment has revealed since 1979 severe metal pollution (mostly cadmium [Cd]) in oysters collected from the estuary. No data are available on metal contamination levels in fish, despite their ecological and economic importance. We present the results from a detailed study based on 4 metals (Cd, zinc [Zn], copper [Cu], and mercury [Hg]) measured in 4 organs (gills, dorsal skeletal muscle, liver, and kidneys) from 8 fish species illustrating several ecological combinations: European eel (Anguilla anguilla), twaite shad (Alosa fallax), bass (Dicentrarchus labrax), meagre (Argyrosomus regius), flounder (Platichthys flesus),, thin-lippid grey mullet (Liza ramada), sole (Solea vulgaris), and Canary drum (Umbrina canariensis). The results show very marked differences between species and organs, as well as very significant variations between the 4 metals. Although metal concentrations measured in fish muscle are low, except in the case of Hg for theA. fallax, high levels of Cu and Cd were observed in the kidneys and livers ofL. ramada andA. anguilla. A multifactorial analysis based on rank ordered metal concentrations for the 8 fish species clearly shows 4 clusters of species assigned to the different degrees of metal contamination, from the lowest contaminated (A. regius, D. labrax, S. vulgaris, andU. canariensis), to the most contaminated group (L. ramada). The most contaminated species (L. ramada, A. angailla, andP. flesus) are characterized by long residence times in the estuary, between 3.5 and 14 yr. ForL. ramada, biofilms with high metal storage capacities would be the principal uptake route; the two other species are benthic with a carnivorous regime. Comparisons between our data and four estuaries (Seine, France; Mersey, U.K.; La Plata, Argentina; Guadalquivir, Spain), on a limited number of common species, metals and fish organs, clearly reveal higher Cd bioaccumulation levels in the Gironde estuary.     

Grasshopper (Orthoptera: Tettigoniidae) Species Composition and Size Across Latitude in Atlantic Coast Salt Marshes

Although grasshoppers are common salt marsh herbivores, we know little about geographic variation in their species composition. We documented latitudinal variation in species composition of the tettigoniid grasshopper fauna of Atlantic Coast salt marshes. Tettigoniids (N = 740 adults) were collected from the Spartina alterniflora zone of 31 salt marsh sites across a latitudinal range of 13.19° (Florida to Maine), with an additional 52 individuals collected from the Juncus roemerianus zone of low-latitude marshes for comparative purposes. Eight species were collected, but some were common only at a few sites or rare throughout the entire collection range. The tettigoniid community was dominated by Orchelimum fidicinium at low latitudes and Conocephalus spartinae at high latitudes. Several factors might explain this shift, including changes in climate, plant phenology, and plant zonation patterns. O. fidicinium and C. spartinae increased in body size toward low latitudes. In laboratory feeding assays, O. fidicinium readily ate S. alterniflora and J. roemerianus leaves, Orchelimum concinnum, which is largely restricted to the J. roemerianus zone, ate only J. roemerianus leaves, and Conocephalus spp. ate neither, consistent with literature suggestions that they mainly consume seeds and flowers. Geographic variation in species composition and body size of grasshoppers may help explain documented patterns of geographic variation in plant palatability and plant–herbivore interactions in Atlantic Coast salt marshes. Because it can be difficult to identify tettigoniids to species, we present a guide to aid future workers in identifying the tettigoniid species common in these marshes.     

The cost of stress: Low dissolved oxygen and economic benefits of recreational striped bass (<Emphasis Type="Italic">Morone saxatilis</Emphasis>) fishing in the Patuxent River

A Poisson catch rate model for striped bass (Morone saxatilis) anglers in Chesapeake Bay was developed that incorporates the effect of bottom temperature and dissolved oxygen (DO). Angler catch rates are shown to be negatively affected by low DO. Predicted angler catch rates were then used in a random utility model of striped bass fishing location choice. Where anglers choose to fish is significantly related to expected catch rate and the travel cost and time from the anglers residence to the fishing location. Results from the random utility model were then used to simulate the economic welfare changes that result from changing DO levels in the Patuxent River. Since there are many substitute sites for fishing in the Patuxent River, the welfare effects are small. Increases in DO from current levels have a small effect on angler welfare, but if levels are allowed to deteriorate so they never exceed 5 mg l⁻¹, the welfare effects are much larger. Under this latter scenario, the net present value of angler losses exceeds 100,000, and are almost100,000, and are almost 300,000 if the fishing grounds are anoxic. Losses are considerably higher as the area impacted by low oxygen conditions increases.     

Comparison of 1982–1983 and 1997–1998 El Niño effects on the shallow-water fish assemblage of the Patos Lagoon estuary (Brazil)

Meteorological impacts of El Niño events of 1982–1983 and 1997–1998 were observed in locations throughout the world. In southern Brazil, El Niño events are associated with increased rainfall and higher freshwater discharge into Patos Lagoon, a large coastal lagoon that empties into the Atlantic Ocean. Based on interdecadal meteorological and biological data sets encompassing the two strongest El Niño events of the last 50 yr, we evaluated the hypothesis that El Niño-induced hydrological changes are a major driving force controlling the interannual variation in the structure and dynamics of fishes in the Patos Lagoon estuary. High rainfall in the drainage basin of the lagoon coincided with low salinity in the estuarine area during both El Niño episodes. Total rainfall in the drainage basin was higher (767 versus 711 mm) and near-zero salinity conditions in the estuarine area lasted about 3 mo longer during the 1997–1998 El Niño event compared with the 1982–1983 event. Hydrological changes triggered by both El Niño events had similar relationships to fish species composition and diversity patterns, but the 1997–1998 event appeared to have stronger effects on the species assemblage. Although shifts in species composition were qualitatively similar during the two El Niño events, distance between El Niño and non-El Niño assemblage multivariate centroids was greater during the 1996–2000 sampling period compared with the 1979–1983 period. We provide a conceptual model of the principal mechanisms and processes connecting the atmospheric-oceanographic interactions triggered by the El Niño phenomena and their effect on the estuarine fish assemblage.     

Food Habits of Large Nektonic Fishes: Trophic Linkages in Delaware Bay and the Adjacent Ocean

Fish diets play a critical role in our understanding of aquatic trophic dynamics and are an important component in developing ecosystem-based approaches to fisheries management. Although large nektonic fishes exert top-down predator effects on the food web and typically support viable commercial and recreational fisheries, little is known about the diet of this guild. We evaluated the diets (6327 stomachs) of four nektonic predatory fishes (Pomatomus saltatrix [78–395 mm], Cynoscion regalis [91–520 mm], Morone americana [156–361 mm], and Morone saxatilis [82–785 mm]) in Delaware Bay and in the adjacent ocean. To assess ontogenetic, geographic, and interspecific variation in diets, observations from individual fish stomachs were clustered into species-size class groups, and dietary overlap was estimated using multivariate analyses. A shift in diet composition, as well as diversity, occurred along the estuarine gradient and into the adjacent ocean. Some prey were shared by most predators, including some crustaceans (dominated by Callinectes sapidus, mysids, and Palaemonetes spp.), fundulids (dominated by Fundulus heteroclitus), engraulids (dominated by Anchoa mitchilli), and clupeids (dominated by Brevoortia tyrannus). However, inter- and intra-specific variation in diet was observed as well. In particular, M. americana consumed fewer engraulids and clupeids, and many more and diverse types of invertebrates, while P. saltatrix consumed more clupeids and less invertebrates. The lack of overlap in diet between the four predators evaluated, and between size groups for each predator, supports previous evidence that these groups feed in trophic guilds defined by species and by size within a species. The highly variable diets for these predators suggest high resolution spatial data are necessary in order to quantify their most important prey and their role in coastal ecosystems.     

The ichthyofauna and abiotic hydrological environment of the Ria de Aveiro,Portugal

The abiotic hydrological environment and the community dynamics of the fish fauna were investigated in the Ria de Aveiro, an estuarine coastal lagoon system (43 km²), which has both marine and fluvial influences. Abiotic hydrological and fish community parameters were recorded routinely during 12 months at ten stations. Temperature ranged between 9.5°C and 26.0°C, salinity between 0.0‰ and 32.0‰, dissolved oxygen between 0.8 mg 1^?1 and 15.4 mg 1^?1, pH between 6.1 and 9.4, and transparency between 4.4% and 100.0%. No significant differences were observed in temperature and dissolved oxygen among stations, or in seasonal variation in transparency. Nineteen thousand thirty-one fish specimens comprising 55 species were sampled. Abundance, biomass, and species richness were highest in summer and late winter at stations near the lagoon entrance. Sedentary species were most numerous, marine migratory species had the highest biomass, and the category “occasional species” had the highest number of species. Atherinidae, Mugilidae, and Gobiidae were the most important families. Eight species represented about 80% of the total fish abundance and biomass but only six species occurred in all the months and at all the stations. It was concluded that the Ria de Aveiro, with high seasonal and spatial abiotic variation, has a very rich and representative fish community compared with temperate and tropical estuaries and estuarine coastal lagoons around the world.     

Macrozooplankton Community Dynamics in Relation to Environmental Variables in Willapa Bay,Washington, USA

Willapa Bay is a large, economically and ecologically important estuary on the Washington coast, USA for which the zooplankton community has not previously been studied. Thus, in 2006 and 2007, six stations within Willapa Bay were sampled biweekly for macrozooplankton, chlorophyll, and various abiotic variables to elucidate the processes underlying community composition and dynamics. Non-metric multidimensional scaling identified water temperature and upwelling values as major factors defining two distinct temporal communities. High densities and a community dominated by oceanic species (Calanus pacificus, Centropages abdominalis) marked the winter season, while summer (or the upwelling season) was dominated by estuarine species (Palaemonidae, Clevelandia ios). Smaller scale changes in the community were characterized by variation in chlorophyll a concentration and salinity and were marked by the presence of other taxa (Neotrypaea californiensis, Mysidae). These results point to the importance of physical processes, including the import of marine organisms and retention of estuarine organisms, in the structuring of the macrozooplankton community in Willapa Bay.     

Comparison of beam trawls for sampling macrofauna of Posidonia seagrass

Beam trawls are a practical method for sampling vagile fauna from deep seagrass beds. The catches of fish and macroinvertebrates associated with Posidonia australis from two beam trawl designs were compared with the catch from a new design of beam trawl. Greater numbers of species and individuals of fish and macroinvertebrates were caught by the new trawl. Its catch also included almost the full range of species taken by the other two trawls. The new trawl was then trialed in the day and at night to compare differences in the catch of species between these times. Trawling at night yielded significantly more species and individuals of macroinvertebrates. In general, more fish were caught at night than during the day, but this was not the case at all sites, nor for all species. We emphasize the need for testing of sampling methods, and consideration of diel behavior patterns, when estimating abundance and species richness of macrofaunal seagrass communities.     

Presence of Fish on the Shallow Flooded Margins of a Small Intermittently Open Estuary in South Eastern Australia under Variable Flooding Regimes

Shallow water habitats within estuarine systems are believed to be important areas for small fish. While a wide variety of shallow habitats have been studied, the land that becomes inundated by the damming effect after the closure of intermittently open mouths has previously been overlooked. Fish were sampled monthly from both the main channel and flood zone of an intermittently open estuary between July 2004 and June 2005 using minifyke nets during the day and at night. A total of 7,787 fish were collected during the study representing 13 species and 11 families. Philypnodon grandiceps was the most abundant species and, together with Atherinosoma microstoma, Pseudogobius olorum, and Galaxias maculatus, made up 94% of the total catch. Inundation of the flood zone occurred in two discrete forms associated with mouth condition, which consisted of sporadic flooding while the mouth was open, to long-term flooding for 6 months after its closure. Large numbers of fish were captured on the flood zone, which included nine species; however, A. microstoma dominated the catch. A distinct shift in the flood zone fish assemblage occurred between the two mouth conditions, which is likely associated with changes in hydro-period and food availability of the flood zone and physico-chemical parameters in the main channel. There was no longitudinal variation in the fish assemblage in both the main channel and flood zone; similarly, the diel period was found to have little effect on the fish assemblage. The total catch per unit effort did not vary across seasons and suggests that fish abundance within the estuary is stable throughout the year. Unlike other estuarine systems where shallow water fish assemblages may be structured by variations in tide and elevation within the Surrey, freshwater inflow and, more importantly, mouth condition appear to have the greatest influence in composition of the shallow water flood zone fish assemblage of intermittently open estuaries.     

The effects of eelgrass habitat loss on estuarine fish communities of southern New England

We studied the late June–August fish community in extant and former eelgrass (Zostera marina L.) habitats in 15 estuaries of Buzzards Bay, and in Waquoit Bay, Massachusetts, U.S. Our objective was to quantify the effects of eelgrass habitat loss on fish abundance, biomass, species composition and richness, life-history characteristics, and habitat use by examining the response of the fish community to eelgrass loss in Waquoit and Buttermilk Bays over an 11-yr period (1988–1999) and in 14 other embayments of Buzzards Bay during 1993, 1996, and 1998. Sampling sites were located in present-day or historical eelgrass beds and were classified according to eelgrass habitat complexity (zero complexity: no eelgrass; low complexity: <100 eelgrass shoots or <100 g wet weight m⁻²; high complexity: ≥100 shoots and ≥100 g wet weight m⁻²). Habitats that had lost eelgrass included a variety of substratum types, from bare mud bottom to dense accumulations of red, brown, and green macroalgae (up to 7,065 g wet weight m⁻²). Contemporaneous sampling of fish (by otter trawl) and vegetated habitat (by divers) was conducted at each site. Overall, fish abundance, biomass, species richness, dominance, and life history diversity decreased significantly along the gradient of decreasing eelgrass habitat complexity. Loss of eelgrass was accompanied by significant declines in these measures of fish community integrity. Ten of the 13 most common species collected from 1988–1996 in Waquoit and Buttermilk Bays showed maximum abundance and biomass in sites with high eelgrass habitat complexity. All but two common species declined in abundance and biomass with the complete loss of eelgrass.     

Marine,brackish, and freshwater fish communities in the vegetated and bare shallows of an Australian Coastal River

Fish communities found in the marine, brackish, and freshwater shallows of the Clarence River (New South Wales, Australia) were sampled over a 12-mo period to compare communities inhabiting bare and vegetated substrata. A total of 26,107 fish representing 57 species and 36 families was collected biomonthly suing a 6-mm mesh siene. Permanent residents (i.e., species found throughout the year) were primarily gobies (Gobiidae) and gudgeons (Eleotridae). Juveniles of many species found as adults in other parts of the river were seasonally abundant in the shallows. Most numerous was a small ambassid, the glassy perchlet (Ambassis jacksoniensis), the majority of which was collected from marine and brackish regions of the river. Firetail gudgeons (Hypseleotris compressus) were caught in highest numbers at the freshwater sites. Cluster analysis suggested that fish communities in widely separated vegetated sites were more similar to each other than to those in adjacent bare sites. Shallow vegetated (Zostera capricorni) habitats in the marine region of the river had greatest diversity and highest abundances of fish, particularly during recruitment periods. At these times, juveniles of many commercially important species were captured, including yellowfin bream (Acanthopagrus australis), sea mullet (Mugil cephalus), flat-tail mullet (Liza agentea), tarwhine (Rhabdosargus sarba), luderick (Girella tricuspidata), silver biddy (Gerres subfasciatus), and sand whiting (Sillago ciliata). The vegetated (Vallisneria gigantea) sites in the brackish region also had significantly more species and individuals during recruitment periods (spring) than bare sites. Although freshwater vegetated sites consistently had more individuals than freshwater bare sites, there were no significant differences in species richness between vegetated and bare habitats. The need to conservatively manage shallow-water fish habitats is stressed. *** DIRECT SUPPORT *** A01BY073 00004