Co-inoculation of Capitella sp. I with its synergistic bacteria enhances degradation of organic matter in organically enriched sediment below fish farms

A polychaete, Capitella sp. I has been shown to degrade organics actively in organically enriched sediment below fish farms. Our aim of the present study is to enhance the biological treatment of sediment by co-inoculation of Capitella sp. I with bacterial isolates that possess high degrading potential for organic matter. We isolated a total of 200 bacterial strains from fecal pellets, burrow lining, worm body, and sediment, and selected six of them for the degradation experiments in the sediment microcosms. With two out of the six isolates, tentatively identified as Vibrio sp. and Vibrio cyclitrophicus by 16SrDNA sequence, we found the TOC reduction rate was stimulated in sediment co-inoculated with the worms and each of the bacteria. In contrast, this was not observed in sediments inoculated only with the worms or the bacterium. These results strongly suggest that co-inoculation of Capitella sp. I with bacteria improves biodegradation.     

The effects of sewage organic matter on biogeochemical processes within mid-shelf sediments offshore Sydney, Australia

A laboratory incubation experiment was conducted using replicate cores collected from a muddy-sand sediment facies offshore Sydney, Australia to determine what components and processes would be affected by the addition of sewage organic matter. Sewage effluent has a solid phase composition of 40% carbon (35% organic carbon), 5% nitrogen, 1% phosphorus and 5% silicate. The molecular C:N:P ratio is 92:10:1, compared to the Redfield ratio of 106:16:1 in marine phytoplankton. Sediment cores were incubated at in situ temperature in a darkened room for periods up to 95 days. Sewage organic matter was added to the cores at three different loads equivalent to 0 (T0), 65 (T1) and 130 (T2) g m⁻² of sediment. Following the addition of sewage organic matter, fluxes of oxygen (into the sediments), ammonia and phosphate (from the sediments) increased, reflecting an enhanced organic carbon supply to the sediments. Oxygen penetrated to a depth of 6 mm in the ambient cores, but the sediment oxygen content was severely depleted following the addition of the sewage-derived organic matter. Sediment porewater data, together with nutrient flux data indicate that oxygen reduction, nitrate reduction and sulphate reduction occurs within these sediments. Following the addition of sewage organic matter, increases in total nitrogen, total phosphate and total organic carbon were measured to depths of 5 cm in the sediments, suggesting that bioturbation influences nutrient and organic carbon distributions. Additionally, irrigation of the surficial sediments may play an important role in the metabolism of organic matter. These results indicate that oxygen penetration, oxygen fluxes, nitrate concentrations within porewaters, ammonia flux rates, and solid phase concentrations of total organic carbon and nutrients may be useful indicators of sediments affected by high rates of organic matter deposition onto Sydney's offshore sediments. The EPA has recently predicted maximum deposition rates of sewage particulate matter to be approximately 1 g m⁻² day⁻¹. Because of the similarities in CNP ratios of sewage organic matter and marine organic matter, the effects of sewage organic matter and marine organic matter inputs to coastal sediments may not be easily distinguishable.     

Contribution of phytoplankton and benthic microalgae to inner shelf sediments of the north-central Gulf of Mexico

Marine sediment may contain both settled phytoplankton and benthic microalgae (BMA). In river-dominated, shallow continental shelf systems, spatial, and temporal heterogeneity in sediment type and water-column characteristics (e.g., turbidity and primary productivity) may promote spatial variation in the relative contribution of these two sources to the sediment organic matter pool available to benthic consumers. Here we use photosynthetic pigment analysis and microscopic examination of sediment microalgae to investigate how the biomass, composition, and degradation state of sediment-associated microalgae vary along the Louisiana (USA) inner shelf, a region strongly influenced by the Mississippi River. Three sandy shoals and surrounding muddy sediments with depths ranging from 4 to 20 m were sampled in April, August, and October 2007. Pigment composition suggested that sediment microalgae were primarily diatoms at all locations. We found no significant differences in sediment chlorophyll a concentrations (8–77 mg m⁻²) at the shoal and off-shoal stations. Epipelic pennate diatoms (considered indicative of BMA) made up a significantly greater proportion of sediment diatoms at sandy (50–98%) compared to more silty off-shoal stations (16–56%). The percentage of centric diatoms (indicators of settled phytoplankton) in the sediment was highest in August. Sediment total pheopigment concentrations on sandy stations (<20 mg m⁻²) were significantly lower than concentrations at nearby muddy stations (>40 mg m⁻²), suggesting differences in sediment microalgal degradation state. These observations suggest that BMA predominate in shallow sandy sediments and that phytodetritus predominates at muddy stations. Our results also suggest that the relative proportion of phytodetritus in the benthos was highest where phytoplankton biomass in the overlying water was greatest, independent of sediment type. The high biomass of BMA found on shoals suggests that benthic primary production on sandy sediments represents a potentially significant local source of sediment microalgal carbon that may be utilized by benthic consumers in continental shelf food webs.     

In situ oxygen uptake rates by coastal sediments under the influence of the Rhône River (NW Mediterranean Sea)

The influence of riverine inputs on biogeochemical cycling and organic matter recycling in sediments on the continental shelf off the Rhône River mouth (NW Mediterranean Sea) was investigated by measuring sediment oxygen uptake rates using a combination of in situ and laboratory techniques. Four stations were investigated during two cruises in June 2001 and June 2002, with depths ranging from 9 to 192 m and over a distance to the Rhône River mouth ranging from 4 to 36 km. Diffusive oxygen uptake (DOU) rates were determined using an in situ sediment microprofiler and total oxygen uptake (TOU) rates were measured using sediment core incubations. There was good agreement between these two techniques which indicates that the non-diffusive fraction of the oxygen flux was minimal at the investigated stations. DOU rates ranged from 3.7±0.4 mmol O₂ m⁻² d⁻¹ at the continental shelf break to 19.3±0.5 mmol O₂ m⁻² d⁻¹ in front of the Rhône River mouth. Sediment oxygen uptake rates mostly decreased with increasing depth and with distance from the Rhône mouth. The highest oxygen uptake rate was observed at 63 m on the Rhône prodelta, corresponding to intense remineralization of organic matter. This oxygen uptake rate was much larger than expected for the increasing bathymetry, which indicates that biogeochemical cycles and benthic deposition are largely influenced by the Rhône River inputs. This functioning was also supported by the detailed spatial distribution of total organic carbon (TOC), total nitrogen (TN) and C/N atomic ratio in surficial sediments. Sediments of the Rhône prodelta are enriched in organic carbon (2–2.2%) relative to the continental shelf sediments (<1%) and showed C/N ratios exceeding Redfield stoichiometry for fresh marine organic matter. A positive exponential correlation was found between DOU and TOC contents (r²=0.98, n=4). South-westward of the Rhône River mouth, sediments contained highly degraded organic matter of both terrestrial and marine origin, due to direct inputs from the Rhône River, sedimentation of marine organic matter and organic material redeposition after resuspension events.     

Unusual grain size effect on trace metals and organic matter in contaminated sediments

Grain size effect on trace metals (cadmium, copper, lead, zinc, and iron) and total organic content distribution in various fractions (<0.063, 0.063–0.105, 0.105–0.250, 0.250–0.500, and 0.500–1.000 mm) of contaminated sediment has been studied. Selective partitioning of the studied contaminants in sediment fractions was observed, with a minimum content in the fine sand fraction of grain size 0.125–0.250 mm. Anomalously high concentrations of trace metals and organic matter content in the medium and coarse sediment fractions (>0.250 mm) was explained by the formation of large agglomerates (clusters) during the generally recommended drying procedures. These large agglomerates, formed from smaller sediment fraction particles enriched by various contaminants kept on their large specific area by adsorption forces, have been observed in photographs of the medium and coarse sediment fractions only. The formed agglomerates consist of small particles cemented either by dissolved organic matter or by sea salts present in the marine sediment. The formation of such agglomerates should be taken into consideration when conducting metal contamination studies on sediments.     

Relationship between apparent redox potential discontinuity (aRPD) depth and environmental variables in soft-sediment habitats

As global temperatures increase and dissolved oxygen(DO) content decreases in marine systems, indices assessing sediment DO content in benthic habitats are becoming increasingly useful. One such measure is the depth to the apparent redox potential discontinuity(aRPD), a transition of sediment color that serves as a relative measure of sediment DO content. We examined spatiotemporal variation of aRPD depth, and the nature of the relationships between aRPD depth and biotic(infauna and epibenthic predators) and abiotic variables(sediment properties), as well as the availability of resources(chlorophyll a concentration, and organic matter content) in the intertidal mudflats of the Bay of Fundy, Canada. aRPD depth varied significantly through space and time, and a combination of biotic(sessile and errant infauna, as well as epibenthic predators), and abiotic(exposure time of a plot, sediment particle size,penetrability, and water content) variables, as well as the availability of resources(sediment organic matter content, and chlorophyll a concentration) were correlated with aRPD depth. As such, knowledge of both biotic and abiotic variables are required for a holistic understanding of sediment DO conditions.Abiotic variables likely dictate a suite of potential aRPD depth conditions, while biota and resource availability, via bioturbation and respiration, strongly influence the observed aRPD depth. As DO conditions in marine systems will continue to change due to global climate change, elucidating these relationships are a key first step in predicting the influence decreasing DO content may have upon marine benthos.     

Impacts of milkfish (Chanos chanos) aquaculture on carbon and nutrient fluxes in the Bolinao area,Philippines

Sediment oxygen consumption, TCO2 production and nutrient fluxes across the sediment-water interface were measured in sediments within and along a transect from four fish pens with production of milkfish (Chanos chanos) in the Bolinao area, The Philippines. The four fish pens were each representing a specific period in the production cycling. There was a positive linear relationship between the rates of sedimentation inside the fish pens and the sediment oxygen consumption indicating that the benthic processes were controlled by the input of organic matter from fish production. The nutrient fluxes were generally higher inside the fish pens, and nitrate was taken up (1.7-5.8 mmol m(-2) d(-1)) whereas ammonium (1-22 mmol m(-2) d(-1)) and phosphate (0.2-4.7 mmol m(-2) d(-1)) were released from the sediments. The sediments were enriched in organic matter with up to a factor 4 compared to outside. A mass balance for one crop of milkfish was constructed based on production data and on measured fluxes of nutrients in the fish pens to assess the loss of carbon and nutrients to the environment. There was a loss to the surroundings of carbon and nitrogen of 51-68% of the total input, whereas phosphorus was buried in the sediments inside the fish pens which acted as net sinks of phosphorus. The results obtained suggest that fish pen culture as practiced in the Bolinao area, leads to even greater impacts on benthic carbon and nutrient cycling than those found in suspended cage cultures.     

Box coring artifacts in sediments affected by a waste water outfall

Variations in porosity of surface sediments are often the major cause of sediment loss during gravity and box coring. Sediments with a high content of organic matter usually have higher porosity, and thus, lower resistance (strain) towards mechanical disturbance. Here, we demonstrate that box coring artifacts (i.e. sediment loss and core shortening) can be produced in sediments from the Palos Verdes (PV) shelf, which in the past had received relatively high loads of organic carbon (OC) enriched particulate matter originating from the Whites Point outfall that had created a high porosity layer at depth. This has been overlooked as a possibility for obtaining low estimates of sediment and pollutant accumulation rates. Since any such sediment loss during coring can lead to serious underestimates of sedimentation rates, our results here may have important implications for any attempts at reconstructing pollutant fluxes and histories in these coastal marine sediments.     

Physical, chemical and microbiological characterization of the intertidal sediments of Pereque Beach, Guarujá (SP), Brazil

Physical and chemical characteristics of intertidal sediments and their relationships with bacteria and cyanobacteria were analyzed at four stations at Pereque Beach. Granulometric analysis showed that Pereque beach has sediment that is classified as sand. The lowest value of the sediment C/N rates (6.08), mainly due to a higher concentration of organic nitrogen, was found at the northern part of Pereque Beach, where organic matter of marine source was more prominent. In this area, density (9.6x10(6)cells cm(-3)), biomass (1992.04ngC cm(-3)) and activity of bacteria were higher than at the southern end. In contrast, cyanobacteria density varied from 2.0 to 4.0x10(5)cells cm(-3), with biomass and total chlorophyll a of the sediment being higher at the southern part, where there are water input from Pereque River and higher organic matter of continental origin. The variability in the microbial population is discussed in the light of the sediment granulometry, organic matter quality, fresh water inflow and pollution.     

Bacteria and organic matter dynamics during a bioremediation treatment of organic-rich harbour sediments

We studied the dynamics of bacteria and organic matter in the Ancient Port of Genoa (Italy) during a bioremediation treatment of sediment (during summer-autumn 1998) in an area characterised by continuous sewage discharge. A strong increase in total benthic bacterial density (TBN) was recorded at the end of the study, from 14 x 10(8) to 58-172 x 10(8) cell g(-1) in different parts of the treated area. The TBN increase was linked to organic matter depletion, from more than 40 to less than 20 mg x g(-1). In order to highlight the main ecological mechanisms involved in bioremediation, a laboratory experiment based on both water and sediment from the basin studied was carried out. We observed an increase in TBN during the first 20 days and a decrease in sediment organic matter (up to about 20%). Increases of organic matter (about 2-fold) and TBN (from 21 to 33 x 10(9) cell l(-1)) occurred in the overlying water, suggesting a strong association between the sediments and water column processes. Hydrolytic activities, which double in the sediment and increase up to a 300-fold in the water, are consistent with the decrease in sediment organic matter and with the water fraction dynamics.     

The Impact of Snail (Bellamya aeruginosa) Bioturbation on Sediment Characteristics and Organic Carbon Fluxes in an Eutrophic Pond

A mesocosm experiment was conducted for 32 days in an eutrophic pond to study the effects of the bioturbation of the freshwater snail, Bellamya aeruginosa, on the benthic environment and to further understand cycling of organic carbon in water containing algal blooms. Chlorophyll‐a (chl‐a), phaeopigment, and organic matter contents of sediment, sediment oxygen consumption (SOC), and dissolved organic carbon (DOC) fluxes were determined on day 1, 16, and 32, respectively. The SOC decreased on day 16 and increased on day 32 significantly with the increase in snail density. DOC fluxes showed a net sediment uptake in all enclosures throughout the experiment. DOC fluxes in the high and mid density treatments were lower than those of the control. The concentrations of chl‐a and phaeopigment in the sediment increased significantly with snail density, indicating that the presence of snails reduced the biomass of phytoplankton. The results suggest that freshwater snails, B. aeruginosa, could influence the algal biomass (chl‐a) of small water bodies by their bioturbation effects on sediment characteristics and the fluxes of organic carbon.     

Fenton体系处理黑臭河道沉积物的效果初探

沉积物中有机质的削减是黑臭水体治理的关键.Fenton(Fe^2++H2O2)试剂在有机污染废水和土壤原位修复中的应用广泛且效果良好;Fenton试剂也能很好地去除黑臭水体中的色度和浊度,但其氧化沉积物有机质的研究未见报道.为探究Fenton试剂对黑臭水体沉积物的氧化效果,本研究通过室内模拟实验用Fenton氧化法对黑臭河道沉积物进行处理,考察氧化过程沉积物特征和性质的变化;分析覆水后沉积物中污染物的释放特征,并和H2O2体系(无Fe^2+)进行比较.结果表明:Fenton体系显著提高了沉积物与上覆水的氧化还原电位,对黑臭河道沉积物中的有机质具有很强的氧化效率.在温度为28℃、H2O2为20%Q(Q为体系中沉积物有机质完全矿化的理论H2O2用量)和Fe^2+∶H2O2(摩尔比)为0.5∶1时,反应1 d,酸挥发性硫化物去除率为70.13%,沉积物总有机碳减少了22.14%,总有机氮减少了87.60%,生成了较多的铵态氮和硝态氮;由于铁对磷的钝化,沉积物中溶解性反应磷含量大幅减少.H2O2体系的氧化速度较Fenton体系慢,覆水后对体系中的Eh提高不明显.值得注意的是,Fenton体系会降低上覆水的pH,释放较多的铵态氮.需要联合其他技术(如微生物法),强化水体中有机质和氨氮的降解,以取得理想的修复作用.     

Heavy Metals in Bottom Sediment in the Upper and Lower Volga

Heavy metal concentrations in bottom sediment in some reaches of the Upper (the Ivankovo Reservoir) and Lower Volga (from Volgograd to the mouth offshore area). The bottom sediment in the Ivankovo Reservoir are shown to be heavily polluted by Cu and Zn and to a lesser extent, by Co and Ni; heavy pollution with Ni and Cr and moderate pollution with Zn and Mn were recorded in the Lower Volga. Principal component procedure was used to assess bottom sediment pollution. The role of organic matter in the formation of the Ivankovo Reservoir bottom sediment pollution with heavy metals is shown to be moderate because of the weak correlation between heavy metal concentration and organic matter content of bottom sediment. The same is true for the Lower Volga because of low organic matter content of bottom sediment. The major role in the redox cycle of elements is shown to belong to Fe in the Ivankovo Reservoir and Mn in the Lower Volga.     

An isotopic model for the origin of autochthonous organic matter contained in the bottom sediments of a reservoir

Geochemical analysis of surface sediment samples collected in 2005 and 2006 was used to evaluate the potential sources of the organic matter present in sediments of southeast Poland's Solina Reservoir.Statistical analysis of sediment variables(carbon to nitrogen ratio, and the carbon 13 and nitrogen 15 isotope ratios) determined for the organic fraction indicated significant spatial variability with respect to sources of organic matter. A binary mixing model was developed from literature sources to predict the relative contributions of allochthonous and autochthonous production to sediment organic matter.Autochthonous production was shown to account for 60-75% of bulk sedimentation in the lacustrine parts of the reservoir, near the dam. In contrast, autochthonous production accounted for only 25% of sedimentation in the riverine zone receiving stream inputs. Statistical analysis identified the δ~(15)N of organic matter as the best predictor of the source of organic matter. Multiple regression analysis indicated that two water-quality variables(nitrate and dissolved silica) were significantly related to the δ~(15)N signature of organic matter. This led to a conclusion that limnetic nitrate and dissolved silica concentrations were regulating organic matter production in the Solina Reservoir.     

Hillslope sediment fence catch efficiencies and particle sorting for post-fire rain storms

Sediment fences are often used to monitor hillslope erosion, but these can underestimate sediment yields due to overtopping of runoff and associated sediment. We modified four sediment fences to collect and measure the runoff and sediment that overtopped the fence in addition to the sediment deposited behind the fence. Specific objectives were to: (1) determine the catch efficiency of sediment fences measuring post-fire hillslope erosion; (2) assess particle sorting of sand, silt/clay, and organic matter from each hillslope through the sediment fence and subsequent runoff collection barrels; (3) evaluate how catch efficiency and particle size sorting relate to site and rainfall-runoff event characteristics; and (4) use runoff simulations to estimate sediment fence volumes for future post-fire monitoring. Catch efficiency ranged from 28 to 100% for events and 38 to 94% per site for the entire sampling season, indicating a relatively large underestimation of sediment yields by sediment fences. Most of the eroded sediment had similar proportions of sand and silt/clay as the hillslope soils, but the sediment behind the fence was significantly enriched in sand while the sediment that overtopped the fence was more strongly enriched in silt/clay. The sediment fences had capacities of 3 m³ for hillslopes of 0.19–0.43 ha, but simulations of runoff for 2- to 100-year storms indicate that the sediment fences would need a capacity of up to 240 m³ to store all of the runoff and associated sediment. More accurate measurements of sediment yields with sediment fences require either increasing the storage capacity of the sediment fence(s) to accommodate the expected volume of runoff and sediment, reducing the size of the contributing area, or directly measuring the runoff and sediment that overtop the fence. © 2020 John Wiley & Sons, Ltd.     

Organic diagenesis in sediment and its impact on the adsorption of bisphenol A and nonylphenol onto marine sediment

Hydrophobic organic contaminants in marine water are mostly adsorbed onto (partitioned into) sediment organic matter (SOM). To study the impact of SOM diagenesis on sediment adsorption properties, artificial sediment with rich SOM content was incubated for more than 120 days. The sediment was sampled every week, and batch sediment adsorption tests were conducted with bisphenol A (BPA) and nonylphenol (NP) as the model pollutants. The results show that the amount of organic matter loaded in the sediment decreased by nearly 80% during incubation. For the incubated sediment, the BPA partition coefficient, Kd, decreased whereas the organic normalized partition coefficient, Koc, more than doubled. The experiments with NP show an even greater increase in Koc. Organic matter diagenesis shows a profound effect on the adsorption behavior of sediment, as the SOM residue has an increasing affinity and partition capacity for organic contaminants.     

Bacterial and organic matter distribution in the sediments of the Thracian Sea (NE Aegean Sea)

Recently, black carbon has been introduced as the form of carbon that may be separated from the biologically mediated carbon cycle thereby representing the non-bioavailable fraction of the estimated organic carbon. It has been speculated that the bioavailability of organic matter may be a limiting factor for the presence of active bacteria within the sediments. In order to address this question, marine sediments were collected from the Thracian Sea (Eastern Mediterranean), a complex system impacted by riverine inputs and Black Sea water masses. In addition to counts of total bacteria, we estimated the fraction of active bacteria by using a destaining step to the DAPI staining method. Black carbon was also estimated following the thermal oxidation method in order to determine the fraction of the refractory organic matter. The fraction of black carbon to total organic carbon varied from 16% to 53% indicating that black carbon constitutes a significant pool of sedimentary organic carbon in the Thracian sea. A fraction ranging from 18% to 97% was scored as nucleoid containing cells. We did not record any significant differences in the fraction of nucleoid-containing bacteria among sediment depths (P<0.05) indicating that there was no accumulation of dead bacterial cells with depth. The same was observed for the fraction of black carbon and bioavailable organic carbon with sediment depth (P<0.05) indicating that benthic consumers are not the key regulators of the organic matter pool in these sediments but have a minor effect. A possible reason for these observations and for the uncoupling between the active bacterial fraction and the bioavailability of organic matter could be (i) the presence of refractory components in the estimated bioavailable organic matter and (ii) the hydrological and geological complexity of the study area. The North Aegean marginal slopes are highly unstable experiencing frequent seismic events. These events are capable of inducing sediment transport from the upper slopes thus altering the entire sediment profile. On the other hand, the significant correlations that were recorded between nucleoid-containing cells and phytopigments (chlorophyll a, phaeopigments, chloroplastic pigment equivalents) at all sediment depths indicate that bacterial communities respond immediately to the deposited phytodetritus, using it as a primary source of carbon and energy. Our data suggests that the Thracian Sea sediments are by no means homogeneous and can best be described as a mosaic controlled by numerous local and regional environmental factors.     

淀山湖底泥生态疏浚适宜深度判定分析

通过室内模拟实验,对淀山湖东部湖区的沉积物进行研究,测定沉积物在不同疏浚深度和疏浚温度下的铵态氮(NH₄⁺-N)、正磷酸盐(NH₄^3--P)和溶解性有机碳(DOC)的释放速率,并对该区域沉积物的理化指标进行检测.结果表明:淀山湖表层沉积物近年来总磷和有机质含量有较大增加.淀山湖东部湖区NH₄⁺-N和DOC存在着释放趋势,NH₄^3--P在夏季会从沉积物中向上覆水中释放,在年内会形成"源"和"汇"的转化.整个淀山湖东部湖区按不同研究区域划分,疏浚深度以10~20 cm最佳,疏浚季节以秋季为佳.通过对淀山湖东部湖区的沉积物在不同疏浚深度和疏浚时间下的污染物释放速率的研究,可以为淀山湖和其它类似湖泊的疏浚工作提供相应的科学依据.     

The impact of reed-protecting structures on littoral zones

The impact of several types of reed-protecting structures on hydrodynamic conditions, sediment properties and littoral water quality were investigated. All types of embankment lead to a dissipation of wave energy. The embankment with fagots (type 1) shows a limited porosity in contrast to the other types examined. All kinds of embankment enhance the accumulation of organic matter at the land/water-interface. Hence, they protect littoral accumulation zones from erosion. The embankment with fagots causes changes in sediment properties at the seaward side of reed belts. The surface of mineral sediments is turned into a fine-grained mud, with a high content of organic matter. Accelerated sedimentary microbial processes (oxygen demand) are produced by increasing nutrient availability (carbon, nitrogen). As a result, the O₂-saturation of water bodies is significantly reduced. This is in contrast to the embankment with wooden partitions and palisades (type 2 and 3), which had no significant effects on sediment conditions and water quality. The consequences of changes in type 1-protected reed stands are discussed. Practical recommendations are given for the further use of reed-protecting structures.